Package Details: hhsuite 3.2.0-1

Git Clone URL: https://aur.archlinux.org/hhsuite.git (read-only)
Package Base: hhsuite
Description: A set of programs for protein sequence homology detection by iterative HMM-HMM comparison for computational biology like PSI-BLAST
Upstream URL: https://github.com/soedinglab/hh-suite
Keywords: bioinformatics hh-suite homology search
Licenses: GPL
Submitter: None
Maintainer: semi
Last Packager: semi
Votes: 1
Popularity: 0.000000
First Submitted: 2012-02-28 23:52
Last Updated: 2019-05-19 04:16

Dependencies (0)

Required by (0)

Sources (2)

Latest Comments

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semi commented on 2019-05-19 04:18

Updated to 3.2.0

erquiroga commented on 2019-05-18 22:27

HH-suite is on v3.2.0 on github https://github.com/soedinglab/hh-suite/archive/v3.2.0.tar.gz

semi commented on 2018-01-07 15:14

Updated to 3.0-beta3

@apolih: If you or someone else wants to provide such packages, I would be happy to reference them in this package.

apolih commented on 2017-05-08 18:13

Thanks for providing this package. I have a few suggestions as I have tried to run it:

could use optional dependency on a (not yet existing) blast-legacy-bin package with files from ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.9/ which are needed to run the addss.pl script

likewise for a psipred-bin package with files from http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/

then patch HHPaths.pm to point to directories from those packages

semi commented on 2016-11-01 16:23

Updated to 3.0 beta 2

semi commented on 2016-02-15 12:17

Fixed.

semi commented on 2016-02-15 07:12

I just got a notification that the upstream download link has died. I'm in contact with the upstream authors on where to point the PKGBUILD, please stay tuned until then.

semi commented on 2014-02-27 09:05

Updated package to configure PERLLIB and HHLIB correctly so bundled scripts work out of the box.

semi commented on 2013-03-22 16:14

Updated to 2.0.16

semi commented on 2013-02-04 11:26

Updated to the new version 2.0.15