Binaries probably need to be distinguished between hmmer2 and hmmer3. Interpro-scan uses both at the time of this writing.
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Package Details: hmmer 3.1b2-2
| Git Clone URL: | https://aur.archlinux.org/hmmer.git (read-only) |
|---|---|
| Package Base: | hmmer |
| Description: | Profile hidden Markov models (HMMs) for database searching using consensus sequences |
| Upstream URL: | http://hmmer.org/ |
| Licenses: | |
| Submitter: | Allan |
| Maintainer: | mschu |
| Last Packager: | mschu |
| Votes: | 10 |
| Popularity: | 0.099043 |
| First Submitted: | 2008-12-28 12:24 |
| Last Updated: | 2018-03-02 09:58 |
Dependencies (1)
- perl-perl4-corelibs (check)
Required by (7)
- biopieces (optional)
- panther
- pfam
- pirsf
- repeatmasker
- superfamily
- tigrfam
Sources (1)
Latest Comments
anadon commented on 2018-03-01 21:23
anadon commented on 2018-02-28 17:15
mschu commented on 2016-02-02 20:21
Updated.
w8jcik commented on 2016-02-02 19:02
makepkg fails, because the sources are not accessible at selected location anymore
The URL should be changed to this one:
source=("http://eddylab.org/software/hmmer3/$pkgver/hmmer-$pkgver.tar.gz")
It comes from http://hmmer.org/download.html which looks like a current site of the project.
mschu commented on 2013-10-29 22:19
Unflagged because 3.1b1 is (a) beta and (b) does not provide sources yet.
td123 commented on 2010-04-12 18:42
created a hmmer2 package and updated this to 3.0
td123 commented on 2010-04-12 18:42
created a hmmer2 package and updated this to 3.0
td123 commented on 2010-04-12 18:32
created a hmmer2 package
Anonymous comment on 2010-04-05 07:28
@yescalona I'm not using Arch at the moment, so I am orphaning the package. Feel free to adopt it.
Anonymous comment on 2010-04-02 03:20
you could create a hmmer2 (http://aur.pastebin.com/HuA0qrVt) and hmmer will be hmmer v3.0
I have a package which merges this with v2 and does all the build checking over at https://aur.archlinux.org/packages/hmmer3-2/ .