Package Details: kraken 1.1-4

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Package Base: kraken
Description: Kraken taxonomic sequence classification system
Upstream URL:
Licenses: GPL3
Submitter: clintval
Maintainer: None
Last Packager: clintval
Votes: 0
Popularity: 0.000000
First Submitted: 2017-11-02 20:40 (UTC)
Last Updated: 2018-06-05 01:29 (UTC)

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Latest Comments

clintval commented on 2018-06-05 01:30 (UTC)

Right now jellyfish v1 comes packaged along with it's binary jellyfish renamed to jellyfish-v1. There are no longer manual dependencies.

On the next upgrade I'll create a separate package for jellyfish1.

clintval commented on 2018-04-20 04:27 (UTC)

At the moment you can only build databases if you prepend your $PATH with the location to your jellyfish v1 install like:

$ env PATH=/opt/jellyfish-v1.1.1/bin:$PATH kraken --kraken-build ...

On the next upgrade I will include Jellyfish v1 in the package and modify the Perl scripts so everything is seamless.