Package Details: kraken 1.1-4

Git Clone URL: https://aur.archlinux.org/kraken.git (read-only)
Package Base: kraken
Description: Kraken taxonomic sequence classification system
Upstream URL: https://github.com/DerrickWood/kraken
Licenses: GPL3
Submitter: clintval
Maintainer: clintval
Last Packager: clintval
Votes: 0
Popularity: 0.000000
First Submitted: 2017-11-02 20:40
Last Updated: 2018-06-05 01:29

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Sources (2)

Latest Comments

clintval commented on 2018-06-05 01:30

Right now jellyfish v1 comes packaged along with it's binary jellyfish renamed to jellyfish-v1. There are no longer manual dependencies.

On the next upgrade I'll create a separate package for jellyfish1.

clintval commented on 2018-04-20 04:27

At the moment you can only build databases if you prepend your $PATH with the location to your jellyfish v1 install like:

$ env PATH=/opt/jellyfish-v1.1.1/bin:$PATH kraken --kraken-build ...

On the next upgrade I will include Jellyfish v1 in the package and modify the Perl scripts so everything is seamless.