Package Details: modeller 10.5-1

Git Clone URL: https://aur.archlinux.org/modeller.git (read-only, click to copy)
Package Base: modeller
Description: 3D Structure Homology Modeller
Upstream URL: http://salilab.org/modeller/
Keywords: modelling science
Licenses: custom
Submitter: None
Maintainer: Athemis
Last Packager: Athemis
Votes: 4
Popularity: 0.000000
First Submitted: 2010-06-01 15:45 (UTC)
Last Updated: 2024-04-30 12:22 (UTC)

Pinned Comments

Athemis commented on 2018-08-10 11:13 (UTC) (edited on 2018-08-10 11:18 (UTC) by Athemis)

@M4G0: That's caused by archlinux rolling out python 3.7. I'll try to just move the python 3.6 files of modeller into the appropriate folders for python 3.7, but I can't promise anything since only python 3.6 is officially supported by upstream. Since modeller is distributed as binary-only we might have to wait for upstream to release a version compatible with python 3.7

UPDATE: Files are in place now using the latest release of this package. However it may not function as intended with python 3.7!

Latest Comments

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AaronArchpy commented on 2024-10-18 23:28 (UTC)

There is a problem with the PGP keys, where is the git clone?

borbothwjq commented on 2020-05-20 20:04 (UTC)

There is a problem importing the PGP keys.

inter1965 commented on 2019-02-17 10:28 (UTC)

actually you use the binary from anaconda, .e.g https://anaconda.org/salilab/modeller/9.21/download/linux-64/modeller-9.21-py37_1.tar.bz2 https://anaconda.org/salilab/modeller/9.21/download/linux-64/modeller-9.21-py27_1.tar.bz2

Athemis commented on 2018-08-10 11:13 (UTC) (edited on 2018-08-10 11:18 (UTC) by Athemis)

@M4G0: That's caused by archlinux rolling out python 3.7. I'll try to just move the python 3.6 files of modeller into the appropriate folders for python 3.7, but I can't promise anything since only python 3.6 is officially supported by upstream. Since modeller is distributed as binary-only we might have to wait for upstream to release a version compatible with python 3.7

UPDATE: Files are in place now using the latest release of this package. However it may not function as intended with python 3.7!

M4G0 commented on 2018-08-09 23:31 (UTC) (edited on 2018-08-10 13:41 (UTC) by M4G0)

The update to 9.20 broke something. It won't recognize if I try to import it as a python module ('no module named modeller') and if I run $mod9.20 script.py it breaks in the first line ('no module named os'). I'm using python 3.7, and I exported the path correctly (export MODINSTALL9v20=/usr/lib/modeller). 9.19 ran fine, but the update with yay broke something. I'll keep trying and report if I have any success.

UPDATE: After @Athemis updated, all seems to work fine. Thanks!

Athemis commented on 2016-02-10 11:53 (UTC)

@xuduugu: Feel free to take over this package

xduugu commented on 2016-02-09 17:23 (UTC)

PKGBUILD for 9.16: https://gist.github.com/anonymous/39aba0dd67d217a6a354 I've rewritten large parts of the package function, but I hope I didn't break anything. Also note that config.py is now located at /etc/modeller/config.py

hseara commented on 2016-01-13 12:18 (UTC)

Modeller 9.16 has been released today. According to the announcement release it has now python 3.5 support, so there is no longer need to ask for any package previous python 3 version form aur. The default python 3 package should work.

w8jcik commented on 2015-06-18 12:22 (UTC)

There is a typo for x86, "{$CARCH}" at line 32 should be "${CARCH}"

Athemis commented on 2014-09-26 11:06 (UTC)

Version 9.14 supports python3.4.

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