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Package Details: pfam 31.0-1
Package Actions
| Git Clone URL: | https://aur.archlinux.org/pfam.git (read-only, click to copy) |
|---|---|
| Package Base: | pfam |
| Description: | The Pfam database is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs). |
| Upstream URL: | ftp://ftp.ebi.ac.uk |
| Licenses: | CC0 |
| Submitter: | anadon |
| Maintainer: | None |
| Last Packager: | anadon |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2018-03-29 18:04 (UTC) |
| Last Updated: | 2018-04-02 16:31 (UTC) |
Dependencies (2)
- hmmerAUR (hmmer3-2AUR)
- bash (bash-devel-static-gitAUR, bash-devel-gitAUR, busybox-coreutilsAUR, bash-gitAUR) (make)
Required by (0)
Sources (32)
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/active_site.dat.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/diff.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/metaseq.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/ncbi.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/pdbmap.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.clans.tsv.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.dead.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.fasta.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.full.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.full.metagenomics.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.full.ncbi.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.full.uniprot.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.hmm.dat.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.hmm.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.regions.tsv.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.regions.uniprot.tsv.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.rp15.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.rp35.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.rp55.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.rp75.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.seed.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-C.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam.version.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/pfamseq.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/relnotes.txt
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/swisspfam.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/trees.tgz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/uniprot.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/uniprot_reference_proteomes.dat.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/uniprot_sprot.dat.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/uniprot_trembl.dat.gz
- ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/userman.txt