Arch Linux User Repository

Search Criteria

Enter search criteria

Search by

Keywords

Out of Date

Sort by

Sort order

Per page

Package Details: pymol-git r5647.071998658-1

Package Actions

Git Clone URL:	https://aur.archlinux.org/pymol-git.git (read-only, click to copy)
Package Base:	pymol-git
Description:	Molecular visualization system on an Open Source foundation
Upstream URL:	https://pymol.org
Licenses:	custom
Conflicts:	pymol
Provides:	pymol
Submitter:	brisvag
Maintainer:	brisvag (Ezmagon)
Last Packager:	Ezmagon
Votes:	1
Popularity:	0.000000
First Submitted:	2019-06-19 10:41 (UTC)
Last Updated:	2024-04-10 11:40 (UTC)

Dependencies (17)

freetype2 (freetype2-qdoled^AUR, freetype2-macos^AUR, freetype2-git^AUR)
glew (glew-libepoxy^AUR, glew-wayland^AUR, glew-osmesa-git^AUR, glew-wayland-git^AUR, glew-git^AUR)
glm (glm-git^AUR)
glut (freeglut-x11-git^AUR, freeglut-wayland-git^AUR, freeglut)
netcdf (netcdf-openmpi)
netcdf-cxx
python-numpy (python-numpy-flame^AUR, python-numpy-mkl-bin^AUR, python-numpy-git^AUR, python-numpy1^AUR, python-numpy-mkl^AUR, python-numpy-mkl-tbb^AUR)
tcsh (tcsh-git^AUR)
desktop-file-utils (desktop-file-utils-git^AUR) (make)
gendesk (make)
mmtf-cpp (make)
msgpack-c (make)
python-build (make)
python-installer (python-installer-git^AUR) (make)
python-setuptools (make)
python-wheel (make)
python-pyqt5 (python-pyqt5-sip4^AUR, python-pyqt5-webkit^AUR) (optional) – Qt5 based UI

Required by (0)

Sources (2)

Latest Comments

brisvag commented on 2020-08-24 09:33 (UTC)

@Lanthanus thanks for spotting that, apparently they fixed that issue 4 days after my last update. I'm going to remove the patch from the PKGBUILD!

Lanthanus commented on 2020-08-12 09:56 (UTC)

Build procedure aborts running into an error. Is this patch for apbstools really needed anymore? It also is used for the python2 package but I would assume any bug dated to 2014 should be fixed by now. Since I never used APBS I can't tell whether it runs fine without the patch. Package builds nicley without the patch.

can't find file to patch at input line 3
Perhaps you used the wrong -p or --strip option?
The text leading up to this was:
--------------------------
|--- modules/pmg_tk/startup/apbs_tools.py.orig  2014-05-14 01:07:32.000000000 +0400
|+++ modules/pmg_tk/startup/apbs_tools.py   2014-05-14 01:15:35.090032827 +0400
--------------------------
File to patch: 
Skip this patch? [y] 
Skipping patch.
9 out of 9 hunks ignored
==> FEHLER: Ein Fehler geschah in prepare().

Ezmagon commented on 2019-12-19 15:52 (UTC)

missing "netcdf" dependency