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Package Details: python-pybedtools 0.8.2-1
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| Git Clone URL: | https://aur.archlinux.org/python-pybedtools.git (read-only, click to copy) |
|---|---|
| Package Base: | python-pybedtools |
| Description: | Wrapper around BEDTools for bioinformatics work |
| Upstream URL: | https://github.com/daler/pybedtools |
| Licenses: | GPL2 |
| Conflicts: | python-pyvcf |
| Provides: | python-pyvcf |
| Submitter: | clintval |
| Maintainer: | None |
| Last Packager: | carlosal1015 |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2017-12-19 17:32 (UTC) |
| Last Updated: | 2022-01-09 20:02 (UTC) |
Dependencies (7)
- bedtools (bedtools-git)
- python-pandas
- python-pysam (python-pysam)
- cython (cython-git, cython3) (make)
- htslib (htslib-git) (optional) – for working with SAM/BAM/CRAM files
- python-matplotlib (python-matplotlib-git) (optional) – for plotting genomic intervals
- ucsc-kent-genome-tools (optional) – for bedgraph to bigwig conversions
Required by (2)
- python-gffutils (optional)
- python-rgt (requires python-pyvcf)