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Package Details: r-genomeinfodb 1.36.0-2
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| Git Clone URL: | https://aur.archlinux.org/r-genomeinfodb.git (read-only, click to copy) |
|---|---|
| Package Base: | r-genomeinfodb |
| Description: | Utilities for manipulating chromosome names, including modifying them to follow a particular naming style |
| Upstream URL: | https://bioconductor.org/packages/release/bioc/html/GenomeInfoDb.html |
| Licenses: | Artistic2.0 |
| Submitter: | greyltc |
| Maintainer: | greyltc (peippo) |
| Last Packager: | peippo |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2019-02-09 14:14 (UTC) |
| Last Updated: | 2023-06-21 10:08 (UTC) |
Dependencies (18)
- r (microsoft-r-open, r352, r-mkl)
- r-biocgenerics
- r-genomeinfodbdata
- r-iranges
- r-rcurl
- r-s4vectors
- r-biocstyle (optional)
- r-bsgenome (optional)
- r-bsgenome.celegans.ucsc.ce2 (optional)
- r-bsgenome.hsapiens.ncbi.grch38 (optional)
- r-bsgenome.scerevisiae.ucsc.saccer2 (optional)
- r-genomicalignments (optional)
- r-genomicfeatures (optional)
- r-genomicranges (optional)
- r-knitr (optional)
- r-rsamtools (optional)
- r-runit (optional)
- r-txdb.dmelanogaster.ucsc.dm3.ensgene (optional)
Required by (318)
- r-allelicimbalance
- r-alpine
- r-amplican
- r-aneufinder
- r-annotationforge (optional)
- r-annotationhub (optional)
- r-annotationhubdata
- r-annotatr
- r-aspediafi
- r-atacseqqc
- r-atena
- r-baalchip
- r-ballgown
- r-bambu
- r-basicstarrseq
- r-bindingsitefinder
- r-bioconcotk (optional)
- r-bioplex
- r-biostrings
- r-biovizbase
- Show 298 more...
Latest Comments
pekkarr commented on 2023-06-17 13:30 (UTC)
This package has a semi-cyclical dependency:
r-genomeinfodbcheckdepends onr-genomicranges, which depends onr-genomeinfodb.dviktor commented on 2022-01-17 20:14 (UTC)
I'm leaving maintenance and support for this package in favor of new repository. You can install pre-built packages from my repo