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Package Details: r-genomicalignments 1.38.2-1
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| Git Clone URL: | https://aur.archlinux.org/r-genomicalignments.git (read-only, click to copy) |
|---|---|
| Package Base: | r-genomicalignments |
| Description: | Representation and manipulation of short genomic alignments |
| Upstream URL: | https://bioconductor.org/packages/release/bioc/html/GenomicAlignments.html |
| Licenses: | Artistic2.0 |
| Submitter: | greyltc |
| Maintainer: | greyltc |
| Last Packager: | peippo |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2019-02-09 15:00 (UTC) |
| Last Updated: | 2024-04-08 14:55 (UTC) |
Dependencies (24)
- r (r-mklAUR)
- r-biocgenericsAUR
- r-biocparallelAUR
- r-biostringsAUR
- r-genomeinfodbAUR
- r-genomicrangesAUR
- r-irangesAUR
- r-rsamtoolsAUR
- r-s4vectorsAUR
- r-summarizedexperimentAUR
- r-biocstyleAUR (optional)
- r-bsgenomeAUR (optional)
- r-bsgenome.dmelanogaster.ucsc.dm3 (optional)
- r-bsgenome.hsapiens.ucsc.hg19AUR (optional)
- r-deseq2AUR (optional)
- r-edgerAUR (optional)
- r-genomicfeaturesAUR (optional)
- r-pasillabamsubset (optional)
- r-rnaseqdata.hnrnpc.bam.chr14 (optional)
- r-rtracklayerAUR (optional)
- Show 4 more dependencies...
Required by (136)
- r-alakazam
- r-allelicimbalance
- r-alpine
- r-amplican (optional)
- r-aneufinder
- r-apalyzer
- r-aspli
- r-atacseqqc
- r-atacseqtfea
- r-atena
- r-baalchip
- r-bambu
- r-basic4cseq
- r-basicstarrseq
- r-bindingsitefinder (optional)
- r-biocparallel (optional)
- r-biovizbase
- r-breakpointr
- r-brgenomics
- r-cagefightr
- r-cager
- r-cfdnapro
- r-chimeraviz
- r-chipexoqual
- r-chippeakanno
- r-chipqc
- r-chromstar
- r-cner
- r-consensusde
- r-contibait
- r-coverageview
- r-crisprvariants
- r-csaw (optional)
- r-cssq
- r-customprodb
- r-damefinder
- r-degnorm
- r-derfinder
- r-descan2
- r-dexseq (optional)
- r-diffbind
- r-dnafusion
- r-easyrnaseq
- r-esatac
- r-exomepeak2
- r-experimenthub (optional)
- r-flames
- r-fraser
- r-funchip
- r-gage (optional)
- r-gcapc
- r-gdnax
- r-genogam
- r-genomation
- r-genomeinfodb (optional)
- r-genomicdatacommons (optional)
- r-genomicfeatures (optional)
- r-genomicfiles
- r-genomicplot
- r-genomicranges (optional)
- r-ggbio
- r-gmapr
- r-gmoviz
- r-greylistchip
- r-grohmm
- r-guideseq
- r-gviz
- r-helloranges
- r-hireadsprocessor
- r-htseqgenie
- r-icetea
- r-igvr
- r-imas
- r-inspect
- r-interest
- r-iranges (optional)
- r-macpet
- r-madseq
- r-mdts
- r-metagene
- r-metagene2
- r-metaseqr2
- r-methylpipe
- r-mosaics
- r-motif2site
- r-msgbsr
- r-nadfinder
- r-orfik
- r-pics
- r-plyranges
- r-pram
- r-prebs
- r-proactiv
- r-quasr (optional)
- r-raer
- r-ramwas
- r-rcade
- r-recoup
- r-repitools
- r-ribodipa
- r-riboprofiling
- r-ribosomeprofilingqc
- r-rnamodr
- r-roar
- r-rqc
- r-rsamtools (optional)
- r-rtracklayer
- r-sarc (optional)
- r-scate
- r-scatedata
- r-scpipe
- r-scruff
- r-seqmagick (optional)
- r-seqsetvis
- r-sgseq
- r-shortread
- r-similarpeak (optional)
- r-single
- r-soggi
- r-spiky
- r-splicinggraphs
- r-splinter
- r-srnadiff
- r-strandcheckr
- r-streamer (optional)
- r-systempiper (optional)
- r-tapseq
- r-tcseq
- r-trackviewer
- r-transcriptr
- r-tsrchitect
- r-ularcirc
- r-umi4cats
- r-vasp
- r-vplotr
- r-zygositypredictor
Latest Comments
dviktor commented on 2022-01-18 20:07 (UTC)
I'm leaving maintenance and support for this package in favor of new repository. You can install pre-built packages from my repo