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Package Details: r-shortread 1.60.0-1
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| Git Clone URL: | https://aur.archlinux.org/r-shortread.git (read-only, click to copy) |
|---|---|
| Package Base: | r-shortread |
| Description: | FASTQ input and manipulation |
| Upstream URL: | https://bioconductor.org/packages/release/bioc/html/ShortRead.html |
| Licenses: | Artistic2.0 |
| Submitter: | greyltc |
| Maintainer: | greyltc (peippo) |
| Last Packager: | peippo |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2019-02-09 15:03 (UTC) |
| Last Updated: | 2023-11-02 11:15 (UTC) |
Dependencies (22)
- r (r352AUR, r-mklAUR)
- r-biobaseAUR
- r-biocgenericsAUR
- r-biocparallelAUR
- r-biostringsAUR
- r-genomeinfodbAUR
- r-genomicalignmentsAUR
- r-genomicrangesAUR
- r-hwriterAUR
- r-irangesAUR
- r-lattice (r)
- r-latticeextraAUR
- r-rhtslibAUR
- r-rsamtoolsAUR
- r-s4vectorsAUR
- r-xvectorAUR
- r-zlibbiocAUR
- r-biocstyleAUR (optional)
- r-biomartAUR (optional)
- r-genomicfeaturesAUR (optional)
- Show 2 more dependencies...
Required by (37)
- r-amplican
- r-basecallqc
- r-beat
- r-biocparallel (optional)
- r-cellbarcode
- r-chipseq
- r-chipseqr
- r-chipsim
- r-csar (optional)
- r-dada2
- r-easyrnaseq
- r-edaseq
- r-esatac
- r-fastqcleaner
- r-flames (optional)
- r-genomicalignments (optional)
- r-girafe
- r-gothic
- r-htseqgenie
- r-icetea
- r-ioniser
- r-macpet
- r-nucler
- r-otubase
- r-ping (optional)
- r-quasr
- r-r453plus1toolbox
- r-repitools (optional)
- r-rqc
- r-rsamtools (optional)
- r-rsvsim
- r-s4vectors (optional)
- r-scruff
- r-segmentseq
- r-systempiper
- r-systempiperdata (optional)
- r-umi4cats
Latest Comments
dviktor commented on 2022-01-18 20:07 (UTC)
I'm leaving maintenance and support for this package in favor of new repository. You can install pre-built packages from my repo