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Package Details: r-variantfiltering 1.36.0-1
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| Git Clone URL: | https://aur.archlinux.org/r-variantfiltering.git (read-only, click to copy) |
|---|---|
| Package Base: | r-variantfiltering |
| Description: | Filtering of coding and non-coding genetic variants |
| Upstream URL: | https://bioconductor.org/packages/VariantFiltering |
| Licenses: | Artistic2.0 |
| Submitter: | BioArchLinuxBot |
| Maintainer: | BioArchLinuxBot |
| Last Packager: | BioArchLinuxBot |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2022-06-06 18:32 (UTC) |
| Last Updated: | 2023-04-27 23:48 (UTC) |
Dependencies (35)
- r (microsoft-r-open, r352, r-mkl)
- r-annotationdbi
- r-biobase
- r-biocgenerics
- r-biocparallel
- r-biostrings
- r-bsgenome
- r-dt
- r-genomeinfodb
- r-genomicfeatures
- r-genomicranges
- r-genomicscores
- r-graph
- r-gviz
- r-iranges
- r-rbgl
- r-rsamtools
- r-s4vectors
- r-shiny
- r-shinyjs
- r-shinythemes
- r-shinytree
- r-summarizedexperiment
- r-variantannotation
- r-xvector
- r-biocstyle (optional)
- r-bsgenome.hsapiens.1000genomes.hs37d5 (optional)
- r-mafdb.1kgenomes.phase1.hs37d5 (optional)
- r-org.hs.eg.db (optional)
- r-phastcons100way.ucsc.hg19 (optional)
- r-polyphen.hsapiens.dbsnp131 (optional)
- r-runit (optional)
- r-sift.hsapiens.dbsnp137 (optional)
- r-snplocs.hsapiens.dbsnp144.grch37 (optional)
- r-txdb.hsapiens.ucsc.hg19.knowngene (optional)