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Package Details: salmon 1.11.4-3
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| Git Clone URL: | https://aur.archlinux.org/salmon.git (read-only, click to copy) |
|---|---|
| Package Base: | salmon |
| Description: | Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments |
| Upstream URL: | https://combine-lab.github.io/salmon/ |
| Keywords: | bioinformatics gene-expression quantification quasi-mapping rna-seq rnaseq sailfish salmon |
| Licenses: | GPL-3.0-only |
| Submitter: | tmiller |
| Maintainer: | kbipinkumar (BioArchLinuxBot) |
| Last Packager: | BioArchLinuxBot |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2018-08-29 07:31 (UTC) |
| Last Updated: | 2026-04-14 12:09 (UTC) |
Dependencies (24)
- boost-libs
- bzip2 (bzip2-gitAUR)
- gcc-libs (gcc-libs-gitAUR, gccrs-libs-gitAUR, gcc-libs-snapshotAUR)
- glibc (glibc-gitAUR, glibc-eacAUR, glibc-git-native-pgoAUR)
- htslibAUR (htslib-gitAUR)
- intel-tbb (onetbb-gitAUR, onetbb)
- libgcc (libgcc-snapshotAUR)
- libgffAUR
- libstdc++ (libstdc++-snapshotAUR)
- xz (xz-gitAUR)
- zlib (zlib-gitAUR, zlib-ng-compat-gitAUR, zlib-ng-compat)
- zlib-ng (zlib-ng-gitAUR)
- boost (boost-gitAUR) (make)
- bzip2 (bzip2-gitAUR) (make)
- catch2 (catch2-gitAUR) (make)
- cereal (make)
- cmake (cmake3AUR, cmake-gitAUR) (make)
- curl (curl-gitAUR, curl-c-aresAUR) (make)
- eigen (eigen-gitAUR, eigen3) (make)
- git (git-gitAUR, git-glAUR, git-wd40AUR) (make)
- Show 4 more dependencies...