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Package Details: salmon 1.10.3-1
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| Git Clone URL: | https://aur.archlinux.org/salmon.git (read-only, click to copy) |
|---|---|
| Package Base: | salmon |
| Description: | Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments |
| Upstream URL: | https://combine-lab.github.io/salmon/ |
| Keywords: | bioinformatics gene-expression quantification quasi-mapping rna-seq rnaseq sailfish salmon |
| Licenses: | GPL3 |
| Submitter: | tmiller |
| Maintainer: | kbipinkumar (BioArchLinuxBot) |
| Last Packager: | BioArchLinuxBot |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2018-08-29 07:31 (UTC) |
| Last Updated: | 2024-03-16 00:06 (UTC) |
Dependencies (15)
- boost-libs (boost-libs-gitAUR)
- bzip2 (bzip2-gitAUR)
- gcc-libs (gccrs-libs-gitAUR, gcc11-libsAUR, gcc-libs-gitAUR)
- glibc (glibc-gitAUR, glibc-linux4AUR, glibc-eacAUR)
- intel-tbb (tbb2020AUR, onetbb-gitAUR, onetbb)
- jemalloc (jemalloc-gitAUR)
- xz (xz-gitAUR)
- zlib (zlib-ng-compat-gitAUR, zlib-gitAUR, zlib-ng-compatAUR)
- boost (boost-gitAUR) (make)
- bzip2 (bzip2-gitAUR) (make)
- cereal (make)
- cmake (cmake-gitAUR) (make)
- curl (curl-quiche-gitAUR, curl-http3-ngtcp2AUR, curl-c-aresAUR, curl-gitAUR) (make)
- python-sphinx (python-sphinx-gitAUR) (make)
- unzip (unzip-natspecAUR, unzip-zstdAUR) (make)