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Package Details: snakemake 5.6.0-1
| Git Clone URL: | https://aur.archlinux.org/snakemake.git (read-only) |
|---|---|
| Package Base: | snakemake |
| Description: | Python-based language and execution environment for GNU Make-like workflows |
| Upstream URL: | https://snakemake.readthedocs.io |
| Licenses: | |
| Submitter: | kyleam |
| Maintainer: | flying-sheep |
| Last Packager: | flying-sheep |
| Votes: | 5 |
| Popularity: | 0.008349 |
| First Submitted: | 2014-06-28 04:18 |
| Last Updated: | 2019-09-10 14:10 |
Dependencies (24)
- python (python-dbg)
- python-appdirs (python-appdirs-git)
- python-configargparse
- python-datrie
- python-docutils
- python-jsonschema (python-jsonschema26)
- python-ratelimiter
- python-requests
- python-wrapt
- python-yaml
- python-gitpython (python-gitpython-211) (make)
- python-setuptools (make)
- graphviz (optional) – For DAG visualization
- python-biopython (optional) – For GenBank/NCBI Entrez support
- python-boto3 (optional) – For AWS support
- python-dropbox (optional) – For Dropbox support
- python-easywebdav (optional) – For WebDAV support
- python-ftputil (optional) – For FTP support
- python-jinja (optional) – For report generation
- python-moto (optional) – For AWS support
- python-networkx (python-networkx-1.11) (optional) – For report generation
- python-psutil (optional) – For benchmarking
- python-pysftp (optional) – For SFTP support
- xrootd (xrootd-py2) (optional) – For XRootD support
Latest Comments
op3 commented on 2019-02-16 19:44
xrootdis now in community and the python-bindings are inpython-xrootd, so the optdepends have to be updated.flying-sheep commented on 2018-12-07 11:38
done, thank you
a-ludi commented on 2018-12-06 08:20
The installation routine of this package depends on
python-gitpython. Please add it tomakedepends.op3 commented on 2018-11-10 12:48
Optional dependencies:
$PKGDIRinPYTHONPATH(at the very end of the PKGBUILD) has to be replaced by$pkgdir.