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Package Details: trimmomatic 0.39-1

Package Actions

Git Clone URL:	https://aur.archlinux.org/trimmomatic.git (read-only, click to copy)
Package Base:	trimmomatic
Description:	Trimmomatic: A flexible read trimming tool for Illumina NGS data
Upstream URL:	http://www.usadellab.org/cms/?page=trimmomatic
Keywords:	science
Licenses:	GPL3
Submitter:	ZJLIN
Maintainer:	ZJLIN
Last Packager:	ZJLIN
Votes:	3
Popularity:	0.000000
First Submitted:	2016-03-10 15:21 (UTC)
Last Updated:	2019-05-11 09:32 (UTC)

Dependencies (1)

java-environment (jdk12^AUR, jdk10^AUR, jdk10-openj9-bin^AUR, jdk7^AUR, amazon-corretto-16^AUR, jdk8-graalvm-bin^AUR, jdk16-graalvm-bin^AUR, jdk16-adoptopenjdk^AUR, jdk8-arm^AUR, liberica-jre-11-bin^AUR, jdk11-j9-bin^AUR, jdk11-jbr-xdg^AUR, jdk16-openjdk^AUR, jdk14-openjdk^AUR, jdk18-openjdk^AUR, amazon-corretto-19-bin^AUR, jdk19-graalvm-bin^AUR, liberica-jre-11-full-bin^AUR, jdk19-graalvm-ee-bin^AUR, jdk13-openjdk-bin^AUR, liberica-jre-8-full-bin^AUR, jdk11-graalvm-bin^AUR, jdk-openj9^AUR, jdk11-graalvm-ee-bin^AUR, jdk12-openjdk^AUR, jdk11-dragonwell-standard-bin^AUR, jdk11-jetbrains-bin^AUR, jdk20-graalvm-bin^AUR, jdk17-graalvm-bin^AUR, jdk8-graalvm-ee-bin^AUR, zulu-15-bin^AUR, jdk20-openj9-bin^AUR, zulu-13-bin^AUR, jdk8-dragonwell-extended-bin^AUR, jdk8-dragonwell-standard-bin^AUR, jdk11-dragonwell-extended-bin^AUR, jdk17-dragonwell-standard-bin^AUR, jdk11^AUR, jdk8-j9-bin^AUR, jdk7-j9-bin^AUR, jdk7r1-j9-bin^AUR, jdk8-dragonwell-extended^AUR, jdk13-openjdk^AUR, jdk15-openjdk^AUR, jdk21-graalvm-bin^AUR, jdk17-jetbrains^AUR, jdk8-openj9-bin^AUR, jdk-lts^AUR, microsoft-openjdk-11-bin^AUR, microsoft-openjdk-17-bin^AUR, microsoft-openjdk-21-bin^AUR, liberica-nik-24-full-bin^AUR, jdk21-jetbrains-git^AUR, zulu-17-bin^AUR, zulu-11-bin^AUR, zulu-8-bin^AUR, mandrel-bin^AUR, mandrel24-bin^AUR, liberica-jdk-17-full-bin^AUR, liberica-jdk-11-lite-bin^AUR, liberica-jdk-11-full-bin^AUR, liberica-jdk-11-bin^AUR, jdk17-graalvm-ee-bin^AUR, jdk21-graalvm-ee-bin^AUR, jdk22-graalvm-ee-bin^AUR, jdk20-graalvm-ee-bin^AUR, jdk22-graalvm-bin^AUR, jdk19-openjdk^AUR, jdk17-jetbrains-bin^AUR, zulu-jdk-fx-bin^AUR, jabba-bin^AUR, jdk21-jetbrains^AUR, jdk17-zulu-prime-bin^AUR, zing-21-bin^AUR, zing-8-bin^AUR, jdk23-graalvm-ee-bin^AUR, jdk-android-studio^AUR, java-openjdk-bin^AUR, amazon-corretto-17^AUR, amazon-corretto-21-bin^AUR, jdk21-temurin^AUR, amazon-corretto-8^AUR, amazon-corretto-11^AUR, jdk11-temurin^AUR, liberica-jdk-full-bin^AUR, liberica-jdk-21-full-bin^AUR, liberica-jdk-8-full-bin^AUR, jdk17-temurin^AUR, jdk8-temurin^AUR, zulu-21-bin^AUR, jdk-temurin^AUR, jdk8^AUR, zulu-17-fx-bin^AUR, jdk8-perf^AUR, zulu-fx-bin^AUR, zulu8-fx-bin^AUR, zulu11-fx-bin^AUR, zulu17-fx-bin^AUR, zulu21-fx-bin^AUR, jdk-openj9-bin^AUR, jdk11-openj9-bin^AUR, jdk17-openj9-bin^AUR, jre-jetbrains^AUR, jdk-openjdk-wakefield^AUR, jdk21-openj9-bin^AUR, java-openjdk-ea-bin^AUR, zulu-23-bin^AUR, jdk^AUR, jdk21-jetbrains-bin^AUR, jdk21-dragonwell-standard-bin^AUR, jdk21-dragonwell-extended-bin^AUR, jdk-openjdk, jdk11-openjdk, jdk17-openjdk, jdk21-openjdk, jdk8-openjdk)

Required by (4)

mutmap
qtl-seq
ugene-bin (optional)
ugene-git (optional)

Sources (2)

Latest Comments

malacology commented on 2022-12-01 17:13 (UTC)

see here, build from source. https://github.com/BioArchLinux/Packages/commit/38697ede5aee94fbef2e00f51da31d83a130d3af