Package Details: ugene 53.1-2

Git Clone URL: https://aur.archlinux.org/ugene.git (read-only, click to copy)
Package Base: ugene
Description: A free open-source cross-platform bioinformatics software
Upstream URL: http://ugene.net
Licenses: GPL-2.0-or-later
Submitter: hottea
Maintainer: hottea (BioArchLinuxBot)
Last Packager: BioArchLinuxBot
Votes: 1
Popularity: 0.000000
First Submitted: 2021-10-16 15:50 (UTC)
Last Updated: 2026-05-18 03:27 (UTC)

Latest Comments

WFCody commented on 2021-11-24 07:54 (UTC)

OK thanks. I might do that. Also some things: Perhaps list the optdepends that are present in ugene-git and ugene-bin. For the binary release, ugene is providing a "external tools" package, but it is of course far better to use system-provided ones (just as comparison ugene-bin is like 1GiB and if you build from source and use system libs, a bit more than 100MiB).

Also when I built this package yesterday, I was missing circular view on my plasmids and could not search for RE sites. I edited the PKGBUILD from "make" to "make all" and I am currently rebuilding. I don't know if this will solve that issue, but I will let you know if that was the problem.

hottea commented on 2021-11-23 11:33 (UTC)

@WFCody The pkg is automatically built in https://github.com/archlinuxcn/repo and the PKGBUILD file is synced here. You could install it from https://github.com/archlinuxcn/repo. Or you could also build it in a clean chroot.

WFCody commented on 2021-11-23 09:02 (UTC)

Suggestion: split ugene and ugene-cuda to 2 different AUR packages. It feels a bit weird to install 4 GiB build dependencies if you are not on nvidia hardware and will not use cuda.