AUR (en) - unicycler

Search Criteria

Enter search criteria

Search by

Keywords

Out of Date

Sort by

Sort order

Per page

Git Clone URL:	https://aur.archlinux.org/unicycler.git (read-only, click to copy)
Package Base:	unicycler
Description:	Hybrid assembly pipeline for bacterial genomes.
Upstream URL:	https://github.com/rrwick/Unicycler/
Licenses:	GPL
Submitter:	PumpkinCheshire
Maintainer:	PumpkinCheshire
Last Packager:	PumpkinCheshire
Votes:	0
Popularity:	0.000000
First Submitted:	2021-06-28 07:18 (UTC)
Last Updated:	2022-01-26 02:13 (UTC)

clang (llvm-rocm-git^AUR, llvm-git^AUR, clang-minimal-git^AUR, clang17-bin^AUR) (make)
gcc (gcc-git^AUR, gccrs-git^AUR, gcc11^AUR, gcc-snapshot^AUR) (make)
python-setuptools (make)
blast+^AUR (blast+-bin^AUR) (optional) – rotating circular contigs
bowtie2^AUR (bowtie2-bin^AUR, bowtie2-git^AUR) (optional) – polishing
pilon^AUR (pilon^AUR) (optional) – polishing
racon^AUR (racon-git^AUR) (optional) – long-read or hybrid assembly
samtools^AUR (samtools-git^AUR) (optional) – polishing
spades^AUR (spades^AUR) (optional) – short read or hybird assembly