|
r-cpvsnp
|
1.36.0-1 |
0 |
0.00
|
Gene set analysis methods for SNP association p-values that lie in genes in given gene sets |
BioArchLinuxBot
|
2024-05-03 12:26 (UTC) |
|
r-bicare
|
1.62.0-1 |
0 |
0.00
|
Biclustering Analysis and Results Exploration |
BioArchLinuxBot
|
2024-05-03 12:23 (UTC) |
|
r-aucell
|
1.26.0-1 |
0 |
0.00
|
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures) |
BioArchLinuxBot
|
2024-05-03 12:21 (UTC) |
|
r-signaturesearch
|
1.18.0-1 |
0 |
0.00
|
Environment for Gene Expression Searching Combined with Functional Enrichment Analysis |
BioArchLinuxBot
|
2024-05-03 12:18 (UTC) |
|
r-umi4cats
|
1.14.0-1 |
0 |
0.00
|
UMI4Cats: Processing, analysis and visualization of UMI-4C chromatin contact data |
BioArchLinuxBot
|
2024-05-03 12:15 (UTC) |
|
r-drugvsdisease
|
2.46.0-1 |
0 |
0.00
|
Comparison of disease and drug profiles using Gene set Enrichment Analysis |
BioArchLinuxBot
|
2024-05-03 12:13 (UTC) |
|
r-gnosis
|
1.2.0-1 |
0 |
0.00
|
Genomics explorer using statistical and survival analysis in R |
pekkarr
|
2024-05-03 09:37 (UTC) |
|
r-imcrtools
|
1.10.0-1 |
0 |
0.00
|
Methods for imaging mass cytometry data analysis |
BioArchLinuxBot
|
2024-05-03 09:29 (UTC) |
|
r-amaretto
|
1.20.0-1 |
0 |
0.00
|
Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression |
BioArchLinuxBot
|
2024-05-03 09:25 (UTC) |
|
r-diffbind
|
3.14.0-1 |
0 |
0.00
|
Differential Binding Analysis of ChIP-Seq Peak Data |
BioArchLinuxBot
|
2024-05-03 09:19 (UTC) |
|
r-spiat
|
1.6.0-1 |
0 |
0.00
|
Spatial Image Analysis of Tissues |
pekkarr
|
2024-05-03 09:12 (UTC) |
|
r-omicspca
|
1.22.0-1 |
0 |
0.00
|
An R package for quantitative integration and analysis of multiple omics assays from heterogeneous samples |
BioArchLinuxBot
|
2024-05-03 08:51 (UTC) |
|
r-structtoolbox
|
1.16.0-1 |
0 |
0.00
|
Data processing & analysis tools for Metabolomics and other omics |
BioArchLinuxBot
|
2024-05-03 08:49 (UTC) |
|
r-spaniel
|
1.18.0-1 |
0 |
0.00
|
Spatial Transcriptomics Analysis |
BioArchLinuxBot
|
2024-05-03 08:41 (UTC) |
|
r-methylpipe
|
1.38.0-1 |
0 |
0.00
|
Base resolution DNA methylation data analysis |
BioArchLinuxBot
|
2024-05-03 08:35 (UTC) |
|
r-mitch
|
1.16.0-1 |
0 |
0.00
|
Multi-Contrast Gene Set Enrichment Analysis |
BioArchLinuxBot
|
2024-05-03 08:33 (UTC) |
|
r-tradeseq
|
1.18.0-1 |
0 |
0.00
|
trajectory-based differential expression analysis for sequencing data |
BioArchLinuxBot
|
2024-05-03 08:30 (UTC) |
|
r-circrnaprofiler
|
1.18.0-1 |
0 |
0.00
|
circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs |
BioArchLinuxBot
|
2024-05-03 08:29 (UTC) |
|
r-derfinder
|
1.38.0-1 |
0 |
0.00
|
Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach |
BioArchLinuxBot
|
2024-05-03 08:18 (UTC) |
|
r-spatialcpie
|
1.20.0-1 |
0 |
0.00
|
Cluster analysis of Spatial Transcriptomics data |
BioArchLinuxBot
|
2024-05-03 08:13 (UTC) |
|
r-epigrahmm
|
1.12.0-1 |
0 |
0.00
|
Epigenomic R-based analysis with hidden Markov models |
BioArchLinuxBot
|
2024-05-03 08:11 (UTC) |
|
r-tcgabiolinks
|
2.32.0-1 |
0 |
0.00
|
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data |
BioArchLinuxBot
|
2024-05-03 07:50 (UTC) |
|
r-tcseq
|
1.28.0-1 |
0 |
0.00
|
Time course sequencing data analysis |
BioArchLinuxBot
|
2024-05-03 07:46 (UTC) |
|
r-tcc
|
1.44.0-1 |
0 |
0.00
|
TCC: Differential expression analysis for tag count data with robust normalization strategies |
BioArchLinuxBot
|
2024-05-03 07:44 (UTC) |
|
r-ssviz
|
1.38.0-1 |
0 |
0.00
|
A small RNA-seq visualizer and analysis toolkit |
BioArchLinuxBot
|
2024-05-03 07:37 (UTC) |
|
r-stager
|
1.26.0-1 |
0 |
0.00
|
stageR: stage-wise analysis of high throughput gene expression data in R |
BioArchLinuxBot
|
2024-05-03 07:36 (UTC) |
|
r-splicingfactory
|
1.12.0-1 |
0 |
0.00
|
Splicing Diversity Analysis for Transcriptome Data |
BioArchLinuxBot
|
2024-05-03 07:35 (UTC) |
|
r-spia
|
2.56.0-1 |
0 |
0.00
|
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations |
BioArchLinuxBot
|
2024-05-03 07:02 (UTC) |
|
r-cager
|
2.10.0-1 |
0 |
0.00
|
Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining |
BioArchLinuxBot
|
2024-05-03 06:36 (UTC) |
|
r-cagefightr
|
1.24.0-1 |
0 |
0.00
|
Analysis of Cap Analysis of Gene Expression (CAGE) data using Bioconductor |
BioArchLinuxBot
|
2024-05-03 06:26 (UTC) |
|
r-comapr
|
1.8.0-1 |
0 |
0.00
|
Crossover analysis and genetic map construction |
pekkarr
|
2024-05-03 06:21 (UTC) |
|
r-genestructuretools
|
1.24.0-1 |
0 |
0.00
|
Tools for spliced gene structure manipulation and analysis |
BioArchLinuxBot
|
2024-05-03 06:14 (UTC) |
|
r-cummerbund
|
2.46.0-1 |
0 |
0.00
|
Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data. |
BioArchLinuxBot
|
2024-05-03 06:07 (UTC) |
|
r-tadar
|
1.2.0-1 |
0 |
0.00
|
Transcriptome Analysis of Differential Allelic Representation |
pekkarr
|
2024-05-03 06:01 (UTC) |
|
r-musicatk
|
1.14.0-1 |
0 |
0.00
|
Mutational Signature Comprehensive Analysis Toolkit |
BioArchLinuxBot
|
2024-05-03 05:56 (UTC) |
|
r-htseqgenie
|
4.34.0-1 |
0 |
0.00
|
A NGS analysis pipeline. |
BioArchLinuxBot
|
2024-05-03 05:54 (UTC) |
|
r-resolve
|
1.6.0-1 |
0 |
0.00
|
An R package for the efficient analysis of mutational signatures from cancer genomes |
pekkarr
|
2024-05-03 05:50 (UTC) |
|
r-cocoa
|
2.18.0-1 |
0 |
0.00
|
Coordinate Covariation Analysis |
BioArchLinuxBot
|
2024-05-03 05:38 (UTC) |
|
r-scmeth
|
1.24.0-1 |
0 |
0.00
|
Functions to conduct quality control analysis in methylation data |
BioArchLinuxBot
|
2024-05-03 05:34 (UTC) |
|
r-consensusde
|
1.22.0-1 |
0 |
0.00
|
RNA-seq analysis using multiple algorithms |
BioArchLinuxBot
|
2024-05-03 05:29 (UTC) |
|
r-microbiomemarker
|
1.10.0-1 |
0 |
0.00
|
microbiome biomarker analysis toolkit |
BioArchLinuxBot
|
2024-05-03 05:26 (UTC) |
|
r-ularcirc
|
1.22.0-1 |
0 |
0.00
|
Shiny app for canonical and back splicing analysis (i.e. circular and mRNA analysis) |
BioArchLinuxBot
|
2024-05-03 05:23 (UTC) |
|
r-fccac
|
1.30.0-1 |
0 |
0.00
|
functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets |
BioArchLinuxBot
|
2024-05-03 05:17 (UTC) |
|
r-rarevariantvis
|
2.32.0-1 |
0 |
0.00
|
A suite for analysis of rare genomic variants in whole genome sequencing data |
BioArchLinuxBot
|
2024-05-03 05:10 (UTC) |
|
r-icetea
|
1.22.0-1 |
0 |
0.00
|
Integrating Cap Enrichment with Transcript Expression Analysis |
BioArchLinuxBot
|
2024-05-03 05:08 (UTC) |
|
r-gwasurvivr
|
1.22.0-1 |
0 |
0.00
|
gwasurvivr: an R package for genome wide survival analysis |
BioArchLinuxBot
|
2024-05-03 04:52 (UTC) |
|
r-mutationalpatterns
|
3.14.0-1 |
0 |
0.00
|
Comprehensive genome-wide analysis of mutational processes |
BioArchLinuxBot
|
2024-05-03 04:51 (UTC) |
|
r-apalyzer
|
1.18.0-1 |
0 |
0.00
|
A toolkit for APA analysis using RNA-seq data |
BioArchLinuxBot
|
2024-05-03 04:48 (UTC) |
|
r-varianttools
|
1.46.0-1 |
0 |
0.00
|
Tools for Exploratory Analysis of Variant Calls |
BioArchLinuxBot
|
2024-05-03 04:47 (UTC) |
|
r-rgntx
|
1.6.0-1 |
0 |
0.00
|
Colocalization analysis of transcriptome elements in the presence of isoform heterogeneity and ambiguity |
pekkarr
|
2024-05-03 04:30 (UTC) |