r-tfarm
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1.26.0-1 |
0 |
0.00
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Transcription Factors Association Rules Miner |
BioArchLinuxBot
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2024-05-01 22:11 (UTC) |
r-textstem
|
0.1.4-3 |
0 |
0.00
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Tools for Stemming and Lemmatizing Text |
BioArchLinuxBot
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2022-06-06 17:29 (UTC) |
r-textshape
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1.7.5-2 |
2 |
0.00
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Tools for Reshaping Text |
BioArchLinuxBot
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2024-04-11 18:15 (UTC) |
r-textclean
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0.9.3-4 |
0 |
0.00
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Text Cleaning Tools |
BioArchLinuxBot
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2022-06-06 17:28 (UTC) |
r-text2vec
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0.6.4-1 |
0 |
0.00
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Modern Text Mining Framework for R |
BioArchLinuxBot
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2023-11-09 12:08 (UTC) |
r-texreg
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1.39.3-1 |
0 |
0.00
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Conversion of R Regression Output to LaTeX or HTML Tables |
BioArchLinuxBot
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2023-11-10 06:03 (UTC) |
r-tester
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0.2.0-1 |
0 |
0.00
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Tests and Checks Characteristics of R Objects |
BioArchLinuxBot
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2024-04-04 18:01 (UTC) |
r-ternarynet
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1.48.0-1 |
0 |
0.00
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Ternary Network Estimation |
BioArchLinuxBot
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2024-05-01 21:12 (UTC) |
r-teqc
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4.26.0-1 |
0 |
0.00
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Quality control for target capture experiments |
BioArchLinuxBot
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2024-05-03 07:37 (UTC) |
r-tenxpbmcdata
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1.22.0-1 |
0 |
0.00
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PBMC data from 10X Genomics |
BioArchLinuxBot
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2024-05-03 08:25 (UTC) |
r-tensorflow
|
2.16.0-1 |
0 |
0.00
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R Interface to 'TensorFlow' |
BioArchLinuxBot
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2024-04-15 18:15 (UTC) |
r-tensora
|
0.36.2.1-3 |
0 |
0.00
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Advanced Tensor Arithmetic with Named Indices |
BioArchLinuxBot
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2024-04-24 19:22 (UTC) |
r-tensor
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1.5-10 |
0 |
0.00
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Tensor product of arrays |
BioArchLinuxBot
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2024-04-24 18:27 (UTC) |
r-teachingdemos
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2.13-2 |
0 |
0.00
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Demonstrations for Teaching and Learning |
BioArchLinuxBot
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2024-02-19 18:08 (UTC) |
r-tdaracne
|
1.47.0-4 |
0 |
0.00
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Network reverse engineering from time course data. |
BioArchLinuxBot
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2023-04-29 04:43 (UTC) |
r-tcseq
|
1.28.0-1 |
0 |
0.00
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Time course sequencing data analysis |
BioArchLinuxBot
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2024-05-03 07:46 (UTC) |
r-tcltk2
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1.2.11-6 |
0 |
0.00
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Tcl/Tk Additions |
BioArchLinuxBot
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2024-03-07 12:02 (UTC) |
r-tcgautils
|
1.24.0-1 |
0 |
0.00
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TCGA utility functions for data management |
BioArchLinuxBot
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2024-05-03 07:59 (UTC) |
r-tcgabiolinksgui.data
|
1.24.0-1 |
0 |
0.00
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Data for the TCGAbiolinksGUI package |
BioArchLinuxBot
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2024-05-04 00:38 (UTC) |
r-tcgabiolinksgui
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1.23.0-4 |
0 |
0.00
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"TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data" |
BioArchLinuxBot
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2023-04-29 07:09 (UTC) |
r-tcgabiolinks
|
2.32.0-1 |
0 |
0.00
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TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data |
BioArchLinuxBot
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2024-05-03 07:50 (UTC) |
r-tcc
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1.44.0-1 |
0 |
0.00
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TCC: Differential expression analysis for tag count data with robust normalization strategies |
BioArchLinuxBot
|
2024-05-03 07:44 (UTC) |
r-tbx20bamsubset
|
1.40.0-1 |
0 |
0.00
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Subset of BAM files from the "TBX20" experiment |
BioArchLinuxBot
|
2024-05-03 07:38 (UTC) |
r-tbsignatureprofiler
|
1.16.0-1 |
0 |
0.00
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Profile RNA-Seq Data Using TB Pathway Signatures |
BioArchLinuxBot
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2024-05-03 18:37 (UTC) |
r-tarifx
|
1.0.6.2-4 |
0 |
0.00
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Collection of Utility and Convenience Functions |
BioArchLinuxBot
|
2022-06-07 13:24 (UTC) |
r-targetsearch
|
2.6.0-1 |
0 |
0.00
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A package for the analysis of GC-MS metabolite profiling data |
BioArchLinuxBot
|
2024-05-02 04:34 (UTC) |
r-targetscore
|
1.42.0-1 |
0 |
0.00
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Infer microRNA targets using microRNA-overexpression data and sequence information |
BioArchLinuxBot
|
2024-05-02 04:36 (UTC) |
r-targetdecoy
|
1.10.0-1 |
0 |
0.00
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Diagnostic Plots to Evaluate the Target Decoy Approach |
BioArchLinuxBot
|
2024-05-02 01:09 (UTC) |
r-target
|
1.18.0-1 |
0 |
0.00
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Predict Combined Function of Transcription Factors |
BioArchLinuxBot
|
2024-05-01 22:19 (UTC) |
r-tapseq
|
1.16.0-1 |
0 |
0.00
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Targeted scRNA-seq primer design for TAP-seq |
BioArchLinuxBot
|
2024-05-03 08:01 (UTC) |
r-tanggle
|
1.10.0-1 |
0 |
0.00
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Visualization of Phylogenetic Networks |
BioArchLinuxBot
|
2024-05-02 01:07 (UTC) |
r-tagcloud
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0.6-4 |
0 |
0.00
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Tag Clouds |
BioArchLinuxBot
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2022-06-06 17:17 (UTC) |
r-tadcompare
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1.14.0-1 |
0 |
0.00
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TADCompare: Identification and characterization of differential TADs |
BioArchLinuxBot
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2024-05-03 07:59 (UTC) |
r-syuzhet
|
1.0.7-1 |
1 |
0.00
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Extracts Sentiment and Sentiment-Derived Plot Arcs from Text |
BioArchLinuxBot
|
2023-08-12 00:03 (UTC) |
r-systempipetools
|
1.12.0-1 |
0 |
0.00
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Tools for data visualization |
BioArchLinuxBot
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2024-05-03 08:32 (UTC) |
r-systempipeshiny
|
1.14.0-1 |
0 |
0.00
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systemPipeShiny: An Interactive Framework for Workflow Management and Visualization |
BioArchLinuxBot
|
2024-05-03 08:04 (UTC) |
r-systempiperdata
|
2.8.0-1 |
0 |
0.00
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systemPipeRdata: Workflow templates and sample data |
BioArchLinuxBot
|
2024-05-03 07:30 (UTC) |
r-systempiper
|
2.10.0-1 |
0 |
0.00
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systemPipeR: NGS workflow and report generation environment |
BioArchLinuxBot
|
2024-05-03 07:56 (UTC) |
r-sys
|
3.4.2-3 |
1 |
0.00
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Powerful and Reliable Tools for Running System Commands in R |
BioArchLinuxBot
|
2024-04-25 06:58 (UTC) |
r-synmut
|
1.20.0-1 |
0 |
0.00
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SynMut: Designing Synonymously Mutated Sequences with Different Genomic Signatures |
BioArchLinuxBot
|
2024-05-03 07:31 (UTC) |
r-synlet
|
2.4.0-1 |
0 |
0.00
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Hits Selection for Synthetic Lethal RNAi Screen Data |
BioArchLinuxBot
|
2024-05-01 22:55 (UTC) |
r-synextend
|
1.16.0-1 |
0 |
0.00
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Tools for Working With Synteny Objects |
BioArchLinuxBot
|
2024-05-03 07:39 (UTC) |
r-synergyfinder
|
3.12.0-1 |
0 |
0.00
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Calculate and Visualize Synergy Scores for Drug Combinations |
BioArchLinuxBot
|
2024-05-01 22:00 (UTC) |
r-synapter
|
2.28.0-1 |
0 |
0.00
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Label-free data analysis pipeline for optimal identification and quantitation |
BioArchLinuxBot
|
2024-05-03 02:03 (UTC) |
r-synapsis
|
1.10.0-1 |
0 |
0.00
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An R package to automate the analysis of double-strand break repair during meiosis |
BioArchLinuxBot
|
2024-05-01 21:06 (UTC) |
r-symmoments
|
1.2.1-1 |
0 |
0.00
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Symbolic Central and Noncentral Moments of the Multivariate Normal Distribution |
BioArchLinuxBot
|
2023-01-27 05:58 (UTC) |
r-sylly.en
|
0.1.3-7 |
0 |
0.00
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Language Support for 'sylly' Package: English |
BioArchLinuxBot
|
2024-04-14 12:19 (UTC) |
r-sylly
|
0.1.6-9 |
0 |
0.00
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Hyphenation and Syllable Counting for Text Analysis |
BioArchLinuxBot
|
2024-03-08 18:08 (UTC) |
r-switchde
|
1.30.0-1 |
0 |
0.00
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Switch-like differential expression across single-cell trajectories |
BioArchLinuxBot
|
2024-05-03 07:43 (UTC) |
r-switchbox
|
1.40.0-1 |
0 |
0.00
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Utilities to train and validate classifiers based on pair switching using the K-Top-Scoring-Pair (KTSP) algorithm |
BioArchLinuxBot
|
2024-05-01 19:38 (UTC) |
r-swimr
|
1.29.0-1 |
0 |
0.00
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A Suite of Analytical Tools for Quantification of C. elegans Swimming Behavior |
BioArchLinuxBot
|
2022-06-07 13:24 (UTC) |
r-swfdr
|
1.30.0-1 |
0 |
0.00
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Estimation of the science-wise false discovery rate and the false discovery rate conditional on covariates |
BioArchLinuxBot
|
2024-05-02 03:55 (UTC) |
r-swathxtend
|
2.26.0-1 |
0 |
0.00
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SWATH extended library generation and statistical data analysis |
BioArchLinuxBot
|
2024-05-01 19:42 (UTC) |
r-swath2stats
|
1.34.0-1 |
0 |
0.00
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Transform and Filter SWATH Data for Statistical Packages |
BioArchLinuxBot
|
2024-05-03 07:51 (UTC) |
r-swamp
|
1.5.1-4 |
0 |
0.00
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Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations |
BioArchLinuxBot
|
2022-06-06 17:08 (UTC) |
r-svunit
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1.0.6-8 |
0 |
0.00
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'SciViews' - Unit, Integration and System Testing |
BioArchLinuxBot
|
2024-04-24 22:30 (UTC) |
r-svmisc
|
1.2.3-9 |
0 |
0.00
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'SciViews' - Miscellaneous Functions |
BioArchLinuxBot
|
2024-02-29 18:05 (UTC) |
r-svgui
|
1.0.1-9 |
0 |
0.00
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SciViews - Manage GUIs in R |
BioArchLinuxBot
|
2024-03-16 12:05 (UTC) |
r-svgpanzoom
|
0.3.4-4 |
0 |
0.00
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R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic |
BioArchLinuxBot
|
2022-06-06 17:06 (UTC) |
r-svdialogs
|
1.1.0-6 |
0 |
0.00
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'SciViews' - Standard Dialog Boxes for Windows, MacOS and Linuxes |
BioArchLinuxBot
|
2024-04-14 12:11 (UTC) |
r-svd
|
0.5.5-2 |
0 |
0.00
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Interfaces to Various State-of-Art SVD and Eigensolvers |
BioArchLinuxBot
|
2024-03-12 18:04 (UTC) |
r-svaretro
|
1.10.0-1 |
0 |
0.00
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Retrotransposed transcript detection from structural variants |
BioArchLinuxBot
|
2024-05-03 18:42 (UTC) |
r-svanumt
|
1.10.0-1 |
0 |
0.00
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NUMT detection from structural variant calls |
BioArchLinuxBot
|
2024-05-03 18:41 (UTC) |
r-sva
|
3.52.0-1 |
0 |
0.00
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Surrogate Variable Analysis |
BioArchLinuxBot
|
2024-05-03 13:02 (UTC) |
r-sushi
|
1.34.0-4 |
0 |
0.00
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Tools for visualizing genomics data |
BioArchLinuxBot
|
2022-11-04 06:17 (UTC) |
r-survtype
|
1.20.0-1 |
0 |
0.00
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Subtype Identification with Survival Data |
BioArchLinuxBot
|
2024-05-03 08:05 (UTC) |
r-survmisc
|
0.5.6-3 |
0 |
0.00
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Miscellaneous Functions for Survival Data |
BioArchLinuxBot
|
2022-06-06 17:03 (UTC) |
r-survminer
|
0.4.9-3 |
0 |
0.00
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Drawing Survival Curves using 'ggplot2' |
BioArchLinuxBot
|
2022-06-06 17:03 (UTC) |
r-survivalsvm
|
0.0.5-3 |
0 |
0.00
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Survival Support Vector Analysis |
BioArchLinuxBot
|
2022-06-06 17:02 (UTC) |
r-survivalroc
|
1.0.3.1-3 |
0 |
0.00
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Time-Dependent ROC Curve Estimation from Censored Survival Data |
BioArchLinuxBot
|
2024-02-20 18:08 (UTC) |
r-survivalanalysis
|
0.3.0-1 |
0 |
0.00
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High-Level Interface for Survival Analysis and Associated Plots |
BioArchLinuxBot
|
2022-11-13 14:05 (UTC) |
r-survey
|
4.4.2-1 |
0 |
0.00
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Analysis of Complex Survey Samples |
BioArchLinuxBot
|
2024-03-20 18:10 (UTC) |
r-survcomp
|
1.54.0-1 |
0 |
0.00
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Performance Assessment and Comparison for Survival Analysis |
BioArchLinuxBot
|
2024-05-01 19:09 (UTC) |
r-surfaltr
|
1.10.0-1 |
0 |
0.00
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Rapid Comparison of Surface Protein Isoform Membrane Topologies Through surfaltr |
BioArchLinuxBot
|
2024-05-03 07:51 (UTC) |
r-suprahex
|
1.42.0-1 |
0 |
0.00
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supraHex: a supra-hexagonal map for analysing tabular omics data |
BioArchLinuxBot
|
2024-05-01 21:27 (UTC) |
r-suppdists
|
1.1.9.7-10 |
0 |
0.00
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Supplementary Distributions |
BioArchLinuxBot
|
2024-04-24 20:09 (UTC) |
r-supersigs
|
1.12.0-1 |
0 |
0.00
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Supervised mutational signatures |
BioArchLinuxBot
|
2024-05-03 08:43 (UTC) |
r-superlearner
|
2.0.29-1 |
0 |
0.00
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Super Learner Prediction |
BioArchLinuxBot
|
2024-02-20 18:10 (UTC) |
r-superheat
|
0.1.0-4 |
0 |
0.00
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A Graphical Tool for Exploring Complex Datasets Using Heatmaps |
BioArchLinuxBot
|
2022-06-06 16:59 (UTC) |
r-summix
|
2.10.0-1 |
0 |
0.00
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Summix2: A suite of methods to estimate, adjust, and leverage substructure in genetic summary data |
BioArchLinuxBot
|
2024-05-04 18:21 (UTC) |
r-summarytools
|
1.0.1-3 |
0 |
0.00
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Tools to Quickly and Neatly Summarize Data |
BioArchLinuxBot
|
2022-06-06 16:58 (UTC) |
r-summarizedbenchmark
|
2.20.0-1 |
0 |
0.00
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Classes and methods for performing benchmark comparisons |
BioArchLinuxBot
|
2023-10-27 06:12 (UTC) |
r-subspace
|
1.0.4-3 |
0 |
0.00
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Interface to OpenSubspace |
BioArchLinuxBot
|
2022-06-06 16:57 (UTC) |
r-subseq
|
1.34.0-1 |
0 |
0.00
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Subsampling of high-throughput sequencing count data |
BioArchLinuxBot
|
2024-05-03 07:40 (UTC) |
r-subcellbarcode
|
1.20.0-1 |
0 |
0.00
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SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome |
BioArchLinuxBot
|
2024-05-03 08:42 (UTC) |
r-styler
|
1.10.3-1 |
1 |
0.00
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Non-Invasive Pretty Printing of R Code |
BioArchLinuxBot
|
2024-04-08 00:02 (UTC) |
r-structuralvariantannotation
|
1.20.0-1 |
0 |
0.00
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Variant annotations for structural variants |
BioArchLinuxBot
|
2024-05-03 18:15 (UTC) |
r-structtoolbox
|
1.16.0-1 |
0 |
0.00
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Data processing & analysis tools for Metabolomics and other omics |
BioArchLinuxBot
|
2024-05-03 08:49 (UTC) |
r-structstrings
|
1.20.0-1 |
0 |
0.00
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Implementation of the dot bracket annotations with Biostrings |
BioArchLinuxBot
|
2024-05-03 07:28 (UTC) |
r-struct
|
1.16.0-1 |
0 |
0.00
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Statistics in R Using Class-based Templates |
BioArchLinuxBot
|
2024-05-03 07:34 (UTC) |
r-strucchange
|
1.5.3-1 |
0 |
0.00
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Testing, Monitoring, and Dating Structural Changes |
BioArchLinuxBot
|
2022-06-15 12:19 (UTC) |
r-stroma4
|
1.24.0-2 |
0 |
0.00
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Assign Properties to TNBC Patients |
BioArchLinuxBot
|
2024-02-12 18:03 (UTC) |
r-stringfish
|
0.16.0-3 |
0 |
0.00
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Alt String Implementation |
BioArchLinuxBot
|
2024-02-08 12:04 (UTC) |
r-stringdist
|
0.9.12-3 |
0 |
0.00
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Approximate String Matching, Fuzzy Text Search, and String Distance Functions |
BioArchLinuxBot
|
2024-04-24 19:01 (UTC) |
r-stringdb
|
2.16.0-1 |
0 |
0.00
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Protein-Protein Interaction Networks and Functional Enrichment Analysis |
BioArchLinuxBot
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2024-05-02 05:37 (UTC) |
r-streamer
|
1.50.0-1 |
0 |
0.00
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Enabling stream processing of large files |
BioArchLinuxBot
|
2024-05-03 07:00 (UTC) |
r-strawr
|
0.0.91-1 |
0 |
0.00
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Fast Implementation of Reading/Dump for .hic Files |
BioArchLinuxBot
|
2023-03-30 00:01 (UTC) |
r-strandcheckr
|
1.22.0-1 |
0 |
0.00
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Calculate strandness information of a bam file |
BioArchLinuxBot
|
2024-05-03 08:06 (UTC) |
r-stopwords
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2.3-7 |
0 |
0.00
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Multilingual Stopword Lists |
BioArchLinuxBot
|
2024-04-14 12:18 (UTC) |
r-stepnorm
|
1.76.0-1 |
0 |
0.00
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Stepwise normalization functions for cDNA microarrays |
BioArchLinuxBot
|
2024-05-01 22:52 (UTC) |
r-stemhypoxia
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1.40.0-1 |
0 |
0.00
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Differentiation of Human Embryonic Stem Cells under Hypoxia gene expression dataset by Prado-Lopez et al. (2010) |
BioArchLinuxBot
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2024-05-04 00:32 (UTC) |
r-stattarget
|
1.34.0-1 |
0 |
0.00
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Statistical Analysis of Molecular Profiles |
BioArchLinuxBot
|
2024-05-01 23:03 (UTC) |
r-statnet.common
|
4.9.0-4 |
1 |
0.00
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Common R Scripts and Utilities Used by the Statnet Project Software |
BioArchLinuxBot
|
2024-04-10 12:06 (UTC) |
r-statmod
|
1.5.0-4 |
1 |
0.00
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Statistical Modeling |
BioArchLinuxBot
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2024-04-24 18:48 (UTC) |
r-statip
|
0.2.3-7 |
0 |
0.00
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Statistical Functions for Probability Distributions and Regression |
BioArchLinuxBot
|
2024-04-09 12:14 (UTC) |
r-stategra
|
1.40.0-1 |
0 |
0.00
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Classes and methods for multi-omics data integration |
BioArchLinuxBot
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2024-05-03 07:32 (UTC) |
r-statebins
|
1.4.0-1 |
0 |
0.00
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Create United States Uniform Cartogram Heatmaps |
BioArchLinuxBot
|
2022-06-06 16:47 (UTC) |
r-startupmsg
|
0.9.6.1-1 |
0 |
0.00
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Utilities for Start-Up Messages |
BioArchLinuxBot
|
2024-02-12 18:09 (UTC) |
r-stars
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0.6.5-1 |
0 |
0.00
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Spatiotemporal Arrays, Raster and Vector Data Cubes |
BioArchLinuxBot
|
2024-04-04 19:00 (UTC) |
r-starbiotrek
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1.28.0-1 |
0 |
0.00
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StarBioTrek |
BioArchLinuxBot
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2023-10-26 05:36 (UTC) |
r-starank
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1.46.0-1 |
0 |
0.00
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Stability Ranking |
BioArchLinuxBot
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2024-05-03 13:12 (UTC) |
r-stanova
|
0.3.0-1 |
0 |
0.00
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Bayesian Models with Categorical Variables |
BioArchLinuxBot
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2022-06-06 16:45 (UTC) |
r-stanheaders
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2.32.7-1 |
1 |
0.00
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C++ Header Files for Stan |
BioArchLinuxBot
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2024-04-25 15:02 (UTC) |
r-stager
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1.26.0-1 |
0 |
0.00
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stageR: stage-wise analysis of high throughput gene expression data in R |
BioArchLinuxBot
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2024-05-03 07:36 (UTC) |
r-stabs
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0.6.4-9 |
0 |
0.00
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Stability Selection with Error Control |
BioArchLinuxBot
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2024-03-10 02:48 (UTC) |
r-stabledist
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0.7.1-10 |
0 |
0.00
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Stable Distribution Functions |
BioArchLinuxBot
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2024-04-24 18:24 (UTC) |
r-stable
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1.1.6-8 |
0 |
0.00
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Probability Functions and Generalized Regression Models for Stable Distributions |
BioArchLinuxBot
|
2024-04-14 12:20 (UTC) |
r-ssviz
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1.38.0-1 |
0 |
0.00
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A small RNA-seq visualizer and analysis toolkit |
BioArchLinuxBot
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2024-05-03 07:37 (UTC) |
r-ssrch
|
1.20.0-1 |
0 |
0.00
|
a simple search engine |
BioArchLinuxBot
|
2024-05-01 20:59 (UTC) |
r-sspaths
|
1.18.0-1 |
0 |
0.00
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ssPATHS: Single Sample PATHway Score |
BioArchLinuxBot
|
2024-05-03 07:58 (UTC) |
r-ssize
|
1.78.0-1 |
0 |
0.00
|
Estimate Microarray Sample Size |
BioArchLinuxBot
|
2024-05-01 18:29 (UTC) |
r-sseq
|
1.42.0-1 |
0 |
0.00
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Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size |
BioArchLinuxBot
|
2024-05-01 18:07 (UTC) |
r-sscu
|
2.34.0-1 |
0 |
0.00
|
Strength of Selected Codon Usage |
BioArchLinuxBot
|
2024-05-03 07:31 (UTC) |
r-sscore
|
1.72.0-2 |
0 |
0.00
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S-Score Algorithm for Affymetrix Oligonucleotide Microarrays |
BioArchLinuxBot
|
2024-02-15 18:02 (UTC) |
r-srnadiff
|
1.24.0-1 |
0 |
0.00
|
Finding differentially expressed unannotated genomic regions from RNA-seq data |
BioArchLinuxBot
|
2024-05-03 08:36 (UTC) |
r-srgnet
|
1.16.0-4 |
0 |
0.00
|
An R package for studying synergistic response to gene mutations from transcriptomics data |
BioArchLinuxBot
|
2022-11-26 16:01 (UTC) |
r-sradb
|
1.66.0-1 |
0 |
0.00
|
A compilation of metadata from NCBI SRA and tools |
BioArchLinuxBot
|
2024-05-03 07:23 (UTC) |
r-sracipe
|
1.20.0-1 |
0 |
0.00
|
Systems biology tool to simulate gene regulatory circuits |
BioArchLinuxBot
|
2024-05-03 08:02 (UTC) |
r-squash
|
1.0.9-8 |
0 |
0.00
|
Color-Based Plots for Multivariate Visualization |
BioArchLinuxBot
|
2024-04-24 21:29 (UTC) |
r-squarem
|
2021.1-13 |
0 |
0.00
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Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms |
BioArchLinuxBot
|
2024-04-24 19:32 (UTC) |
r-squadd
|
1.52.0-2 |
0 |
0.00
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Add-on of the SQUAD Software |
BioArchLinuxBot
|
2024-04-07 12:03 (UTC) |
r-sqldf
|
0.4.11-4 |
0 |
0.00
|
Manipulate R Data Frames Using SQL |
BioArchLinuxBot
|
2022-06-06 16:37 (UTC) |
r-sqldataframe
|
1.16.1-1 |
0 |
0.00
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Representation of SQL database in DataFrame metaphor |
BioArchLinuxBot
|
2024-02-13 00:03 (UTC) |
r-spsutil
|
0.2.2-4 |
0 |
0.00
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'systemPipeShiny' Utility Functions |
BioArchLinuxBot
|
2022-06-06 16:36 (UTC) |
r-spsimseq
|
1.14.0-1 |
0 |
0.00
|
Semi-parametric simulation tool for bulk and single-cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-03 08:47 (UTC) |
r-spscomps
|
0.3.3.0-1 |
0 |
0.00
|
'systemPipeShiny' UI and Server Components |
BioArchLinuxBot
|
2023-07-13 00:07 (UTC) |
r-spqn
|
1.16.0-1 |
0 |
0.00
|
Spatial quantile normalization |
BioArchLinuxBot
|
2024-05-03 07:40 (UTC) |
r-spp
|
1.16.0-7 |
0 |
0.00
|
ChIP-Seq Processing Pipeline |
BioArchLinuxBot
|
2022-11-26 13:51 (UTC) |
r-sponge
|
1.24.0-1 |
0 |
0.00
|
Sparse Partial Correlations On Gene Expression |
BioArchLinuxBot
|
2024-04-13 18:20 (UTC) |
r-splus2r
|
1.3.5-2 |
1 |
0.00
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Supplemental S-PLUS Functionality in R |
BioArchLinuxBot
|
2024-03-01 06:03 (UTC) |
r-splots
|
1.70.0-1 |
0 |
0.00
|
Visualization of high-throughput assays in microtitre plate or slide format |
BioArchLinuxBot
|
2024-05-02 04:26 (UTC) |
r-splitstackshape
|
1.4.8-7 |
0 |
0.00
|
Stack and Reshape Datasets After Splitting Concatenated Values |
BioArchLinuxBot
|
2024-04-07 12:07 (UTC) |
r-splinter
|
1.30.0-1 |
0 |
0.00
|
Splice Interpreter of Transcripts |
BioArchLinuxBot
|
2024-05-04 18:06 (UTC) |
r-splinetimer
|
1.32.0-1 |
0 |
0.00
|
Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction |
BioArchLinuxBot
|
2024-05-03 12:28 (UTC) |
r-splines2
|
0.5.1-1 |
0 |
0.00
|
Regression Spline Functions and Classes |
BioArchLinuxBot
|
2023-08-20 00:02 (UTC) |
r-splicinggraphs
|
1.44.0-1 |
0 |
0.00
|
Create, manipulate, visualize splicing graphs, and assign RNA-seq reads to them |
BioArchLinuxBot
|
2024-05-03 08:14 (UTC) |
r-splicingfactory
|
1.12.0-1 |
0 |
0.00
|
Splicing Diversity Analysis for Transcriptome Data |
BioArchLinuxBot
|
2024-05-03 07:35 (UTC) |
r-splatter
|
1.28.0-1 |
0 |
0.00
|
Simple Simulation of Single-cell RNA Sequencing Data |
BioArchLinuxBot
|
2024-05-03 07:48 (UTC) |
r-splancs
|
2.01.44-2 |
0 |
0.00
|
Spatial and Space-Time Point Pattern Analysis |
BioArchLinuxBot
|
2024-04-08 18:06 (UTC) |
r-spktools
|
1.60.0-1 |
0 |
0.00
|
Methods for Spike-in Arrays |
BioArchLinuxBot
|
2024-05-02 12:44 (UTC) |
r-spiky
|
1.10.0-1 |
0 |
0.00
|
Spike-in calibration for cell-free MeDIP |
BioArchLinuxBot
|
2024-05-03 08:19 (UTC) |
r-spikeli
|
2.64.0-1 |
0 |
0.00
|
Affymetrix Spike-in Langmuir Isotherm Data Analysis Tool |
BioArchLinuxBot
|
2024-05-02 03:18 (UTC) |
r-spidermir
|
1.32.0-1 |
0 |
0.00
|
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data |
BioArchLinuxBot
|
2023-10-26 05:01 (UTC) |
r-spicyr
|
1.16.0-1 |
0 |
0.00
|
Spatial analysis of in situ cytometry data |
BioArchLinuxBot
|
2024-05-03 13:43 (UTC) |
r-spia
|
2.56.0-1 |
0 |
0.00
|
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations |
BioArchLinuxBot
|
2024-05-03 07:02 (UTC) |
r-spem
|
1.44.0-1 |
0 |
0.00
|
S-system parameter estimation method |
BioArchLinuxBot
|
2024-05-01 18:37 (UTC) |
r-speedglm
|
0.3.5-3 |
0 |
0.00
|
Fitting Linear and Generalized Linear Models to Large Data Sets |
BioArchLinuxBot
|
2024-04-25 09:34 (UTC) |
r-spectraltad
|
1.20.0-1 |
0 |
0.00
|
SpectralTAD: Hierarchical TAD detection using spectral clustering |
BioArchLinuxBot
|
2024-05-03 07:49 (UTC) |
r-spectra
|
1.14.0-1 |
0 |
0.00
|
Spectra Infrastructure for Mass Spectrometry Data |
BioArchLinuxBot
|
2024-05-03 07:22 (UTC) |
r-specond
|
1.58.0-1 |
0 |
0.00
|
Condition specific detection from expression data |
BioArchLinuxBot
|
2024-05-01 19:44 (UTC) |
r-specl
|
1.38.0-1 |
0 |
0.00
|
specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics |
BioArchLinuxBot
|
2024-05-01 20:04 (UTC) |
r-speaq
|
2.7.0-6 |
1 |
0.00
|
Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations |
BioArchLinuxBot
|
2022-11-26 15:40 (UTC) |
r-spdl
|
0.0.5-1 |
0 |
0.00
|
Wrapper for 'RcppSpdlog' Functions |
BioArchLinuxBot
|
2023-06-18 18:04 (UTC) |
r-spd
|
2.0.1-3 |
1 |
0.10
|
Semi Parametric Distribution |
BioArchLinuxBot
|
2024-03-15 14:16 (UTC) |
r-spbayes
|
0.4.7-1 |
0 |
0.00
|
Univariate and Multivariate Spatial-Temporal Modeling |
BioArchLinuxBot
|
2023-12-12 00:04 (UTC) |
r-spatzie
|
1.10.0-1 |
0 |
0.00
|
Identification of enriched motif pairs from chromatin interaction data |
BioArchLinuxBot
|
2024-05-03 19:19 (UTC) |
r-spatstat.utils
|
3.0.4-2 |
0 |
0.00
|
Utility Functions for 'spatstat' |
BioArchLinuxBot
|
2024-03-16 12:01 (UTC) |
r-spatstat.sparse
|
3.0.3-2 |
0 |
0.00
|
Sparse Three-Dimensional Arrays and Linear Algebra Utilities |
BioArchLinuxBot
|
2024-04-14 12:06 (UTC) |
r-spatstat.random
|
3.2.3-1 |
0 |
0.00
|
Random Generation Functionality for the 'spatstat' Family |
BioArchLinuxBot
|
2024-02-29 12:29 (UTC) |
r-spatstat.model
|
3.2.11-1 |
0 |
0.00
|
Parametric Statistical Modelling for the 'spatstat' Family |
BioArchLinuxBot
|
2024-03-22 18:01 (UTC) |
r-spatstat.linnet
|
3.1.5-1 |
0 |
0.00
|
Linear Networks Functionality of the 'spatstat' Family |
BioArchLinuxBot
|
2024-03-25 12:05 (UTC) |
r-spatstat.geom
|
3.2.9-1 |
0 |
0.00
|
Geometrical Functionality of the 'spatstat' Family |
BioArchLinuxBot
|
2024-02-28 12:01 (UTC) |
r-spatstat.explore
|
3.2.7-1 |
0 |
0.00
|
Exploratory Data Analysis for the 'spatstat' Family |
BioArchLinuxBot
|
2024-03-21 06:23 (UTC) |
r-spatstat.data
|
3.0.4-2 |
0 |
0.00
|
Datasets for 'spatstat' Family |
BioArchLinuxBot
|
2024-04-14 12:05 (UTC) |
r-spatstat.core
|
2.4.4-6 |
0 |
0.00
|
Core Functionality of the 'spatstat' Family |
BioArchLinuxBot
|
2022-12-31 06:02 (UTC) |
r-spatstat
|
3.0.8-1 |
0 |
0.00
|
Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests |
BioArchLinuxBot
|
2024-03-26 18:08 (UTC) |
r-spatialtools
|
1.0.5-1 |
0 |
0.00
|
Tools for Spatial Data Analysis |
BioArchLinuxBot
|
2023-07-19 00:03 (UTC) |
r-spatialheatmap
|
2.10.0-1 |
0 |
0.00
|
Creating spatial heatmaps from R and Shiny |
BioArchLinuxBot
|
2024-05-04 18:13 (UTC) |
r-spatialextremes
|
2.1.0-5 |
0 |
0.00
|
Modelling Spatial Extremes |
BioArchLinuxBot
|
2022-06-06 15:50 (UTC) |
r-spatialexperiment
|
1.14.0-1 |
0 |
0.00
|
S4 Class for Spatial Experiments handling |
BioArchLinuxBot
|
2024-05-03 07:42 (UTC) |
r-spatialdecon
|
1.14.0-1 |
0 |
0.00
|
Deconvolution of mixed cells from spatial and/or bulk gene expression data |
BioArchLinuxBot
|
2024-05-03 08:38 (UTC) |
r-spatialde
|
1.10.0-1 |
0 |
0.00
|
R wrapper for SpatialDE |
BioArchLinuxBot
|
2024-05-03 08:52 (UTC) |
r-spatialcpie
|
1.20.0-1 |
0 |
0.00
|
Cluster analysis of Spatial Transcriptomics data |
BioArchLinuxBot
|
2024-05-03 08:13 (UTC) |
r-spatest
|
3.1.2-7 |
0 |
0.00
|
Score Test and Meta-Analysis Based on Saddlepoint Approximation |
BioArchLinuxBot
|
2024-04-05 18:06 (UTC) |
r-sparsesvd
|
0.2.2-3 |
0 |
0.00
|
Sparse Truncated Singular Value Decomposition (from 'SVDLIBC') |
BioArchLinuxBot
|
2024-03-14 18:08 (UTC) |
r-sparsesignatures
|
2.14.0-1 |
0 |
0.00
|
SparseSignatures |
BioArchLinuxBot
|
2024-05-03 08:45 (UTC) |
r-sparsepca
|
0.1.2-7 |
0 |
0.00
|
Sparse Principal Component Analysis (SPCA) |
BioArchLinuxBot
|
2024-04-08 18:14 (UTC) |
r-sparsenetgls
|
1.22.0-1 |
0 |
0.00
|
Using Gaussian graphical structue learning estimation in generalized least squared regression for multivariate normal regression |
BioArchLinuxBot
|
2024-05-01 21:52 (UTC) |
r-sparsemvn
|
0.2.2-4 |
0 |
0.00
|
Multivariate Normal Functions for Sparse Covariance and Precision Matrices |
BioArchLinuxBot
|
2022-06-06 15:45 (UTC) |
r-sparsematrixstats
|
1.16.0-1 |
0 |
0.00
|
Summary Statistics for Rows and Columns of Sparse Matrices |
BioArchLinuxBot
|
2024-05-01 18:28 (UTC) |
r-sparseinv
|
0.1.3-4 |
0 |
0.00
|
Computation of the Sparse Inverse Subset |
BioArchLinuxBot
|
2022-06-06 15:45 (UTC) |
r-sparsedossa
|
1.24.0-2 |
0 |
0.00
|
Sparse Data Observations for Simulating Synthetic Abundance |
BioArchLinuxBot
|
2024-02-11 18:05 (UTC) |
r-sparrow
|
1.8.0-1 |
0 |
0.00
|
Take command of set enrichment analyses through a unified interface |
BioArchLinuxBot
|
2023-10-27 05:36 (UTC) |
r-sparql
|
1.16-4 |
0 |
0.00
|
SPARQL client |
BioArchLinuxBot
|
2022-06-07 13:22 (UTC) |
r-spaniel
|
1.18.0-1 |
0 |
0.00
|
Spatial Transcriptomics Analysis |
BioArchLinuxBot
|
2024-05-03 08:41 (UTC) |
r-spam
|
2.10.0-3 |
0 |
0.00
|
SPArse Matrix |
BioArchLinuxBot
|
2024-04-25 07:07 (UTC) |
r-spacetime
|
1.3.1-1 |
0 |
0.00
|
Classes and Methods for Spatio-Temporal Data |
BioArchLinuxBot
|
2023-12-06 00:05 (UTC) |
r-spacepac
|
1.42.0-1 |
0 |
0.00
|
Identification of Mutational Clusters in 3D Protein Space via Simulation. |
BioArchLinuxBot
|
2024-05-03 18:25 (UTC) |
r-soupx
|
1.6.2-1 |
0 |
0.00
|
Single Cell mRNA Soup eXterminator |
BioArchLinuxBot
|
2022-11-01 18:05 (UTC) |
r-sortable
|
0.5.0-3 |
0 |
0.00
|
Drag-and-Drop in 'shiny' Apps with 'SortableJS' |
BioArchLinuxBot
|
2023-03-29 18:03 (UTC) |
r-soniclength
|
1.4.7-9 |
0 |
0.00
|
Estimating Abundance of Clones from DNA Fragmentation Data |
BioArchLinuxBot
|
2024-03-07 00:04 (UTC) |
r-somnibus
|
1.12.0-1 |
0 |
0.00
|
Smooth modeling of bisulfite sequencing |
BioArchLinuxBot
|
2024-05-03 05:31 (UTC) |
r-sombrero
|
1.4.2-1 |
0 |
0.00
|
SOM Bound to Realize Euclidean and Relational Outputs |
BioArchLinuxBot
|
2024-01-26 00:06 (UTC) |
r-somaticsignatures
|
2.40.0-1 |
0 |
0.00
|
Somatic Signatures |
BioArchLinuxBot
|
2024-05-03 13:23 (UTC) |
r-som
|
0.3.5.1-10 |
0 |
0.00
|
Self-Organizing Map |
BioArchLinuxBot
|
2024-04-24 19:50 (UTC) |
r-sojourner
|
1.11.0-4 |
0 |
0.00
|
Statistical analysis of single molecule trajectories |
BioArchLinuxBot
|
2023-04-29 05:01 (UTC) |
r-soggi
|
1.36.0-1 |
0 |
0.00
|
Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals |
BioArchLinuxBot
|
2024-05-03 03:41 (UTC) |
r-softimpute
|
1.4.1-9 |
0 |
0.00
|
Matrix Completion via Iterative Soft-Thresholded SVD |
BioArchLinuxBot
|
2024-03-03 18:08 (UTC) |
r-snpstats
|
1.54.0-1 |
0 |
0.00
|
SnpMatrix and XSnpMatrix classes and methods |
BioArchLinuxBot
|
2024-05-02 05:09 (UTC) |
r-snprelate
|
1.38.0-1 |
0 |
0.00
|
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data |
BioArchLinuxBot
|
2024-05-01 18:53 (UTC) |
r-snplocs.hsapiens.dbsnp150.grch38
|
0.99.20-3 |
0 |
0.00
|
SNP locations for Homo sapiens (dbSNP Build 150) |
BioArchLinuxBot
|
2022-06-06 15:35 (UTC) |
r-snplocs.hsapiens.dbsnp144.grch37
|
0.99.20-4 |
0 |
0.00
|
SNP locations for Homo sapiens (dbSNP Build 144) |
BioArchLinuxBot
|
2022-06-06 15:35 (UTC) |
r-snphood
|
1.34.0-1 |
0 |
0.00
|
SNPhood: Investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data |
BioArchLinuxBot
|
2024-05-03 08:08 (UTC) |
r-snpediar
|
1.30.0-1 |
0 |
0.00
|
Query data from SNPedia |
BioArchLinuxBot
|
2024-05-01 18:07 (UTC) |
r-snowfall
|
1.84.6.3-2 |
0 |
0.00
|
Easier Cluster Computing (Based on 'snow') |
BioArchLinuxBot
|
2024-04-08 18:09 (UTC) |
r-snowballc
|
0.7.1-3 |
1 |
0.00
|
Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library |
BioArchLinuxBot
|
2024-04-24 20:33 (UTC) |
r-snm
|
1.52.0-1 |
0 |
0.00
|
Supervised Normalization of Microarrays |
BioArchLinuxBot
|
2024-05-01 19:42 (UTC) |
r-snifter
|
1.14.0-1 |
0 |
0.00
|
R wrapper for the python openTSNE library |
BioArchLinuxBot
|
2024-05-02 00:54 (UTC) |
r-snapcount
|
1.16.0-1 |
0 |
0.00
|
R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts |
BioArchLinuxBot
|
2024-05-02 19:47 (UTC) |
r-snapcgh
|
1.72.0-1 |
0 |
0.00
|
Segmentation, normalisation and processing of aCGH data |
BioArchLinuxBot
|
2023-10-26 07:48 (UTC) |
r-snakecase
|
0.11.1-1 |
0 |
0.00
|
Convert Strings into any Case |
BioArchLinuxBot
|
2023-08-28 00:01 (UTC) |
r-snageedata
|
1.40.0-1 |
0 |
0.00
|
SNAGEE data |
BioArchLinuxBot
|
2024-05-04 00:10 (UTC) |
r-snagee
|
1.44.0-1 |
0 |
0.00
|
Signal-to-Noise applied to Gene Expression Experiments |
BioArchLinuxBot
|
2024-05-02 05:14 (UTC) |
r-sna
|
2.7.2-1 |
1 |
0.00
|
Tools for Social Network Analysis |
BioArchLinuxBot
|
2023-12-06 06:03 (UTC) |
r-sn
|
2.1.1-1 |
0 |
0.00
|
The Skew-Normal and Related Distributions Such as the Skew-t and the SUN |
BioArchLinuxBot
|
2023-04-05 00:01 (UTC) |
r-smvar
|
1.3.4-8 |
0 |
0.00
|
Structural Model for Variances |
BioArchLinuxBot
|
2024-03-10 04:58 (UTC) |
r-smurf
|
1.1.5-3 |
0 |
0.00
|
Sparse Multi-Type Regularized Feature Modeling |
BioArchLinuxBot
|
2023-03-25 06:02 (UTC) |
r-smoothwin
|
3.0.0-3 |
0 |
0.00
|
Soft Windowing on Linear Regression |
BioArchLinuxBot
|
2022-06-06 15:27 (UTC) |
r-smoothie
|
1.0.3-7 |
0 |
0.00
|
Two-Dimensional Field Smoothing |
BioArchLinuxBot
|
2024-03-15 14:14 (UTC) |
r-smoother
|
1.3-1 |
0 |
0.00
|
Functions Relating to the Smoothing of Numerical Data |
BioArchLinuxBot
|
2024-04-03 06:03 (UTC) |
r-smite
|
1.30.0-1 |
0 |
0.00
|
Significance-based Modules Integrating the Transcriptome and Epigenome |
BioArchLinuxBot
|
2023-10-28 13:02 (UTC) |
r-smatr
|
3.4.8-9 |
0 |
0.00
|
(Standardised) Major Axis Estimation and Testing Routines |
BioArchLinuxBot
|
2024-03-12 18:14 (UTC) |
r-smartsva
|
0.1.3-3 |
0 |
0.00
|
Fast and Robust Surrogate Variable Analysis |
BioArchLinuxBot
|
2022-06-06 15:25 (UTC) |
r-smap
|
1.66.0-2 |
0 |
0.00
|
A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling |
BioArchLinuxBot
|
2024-04-05 18:07 (UTC) |
r-smad
|
1.20.0-1 |
0 |
0.00
|
Statistical Modelling of AP-MS Data (SMAD) |
BioArchLinuxBot
|
2024-05-01 20:11 (UTC) |
r-smacof
|
2.1.6-1 |
0 |
0.00
|
Multidimensional Scaling |
BioArchLinuxBot
|
2024-03-01 18:03 (UTC) |
r-sm
|
2.2.6.0-1 |
0 |
0.00
|
Smoothing Methods for Nonparametric Regression and Density Estimation |
BioArchLinuxBot
|
2024-02-17 18:01 (UTC) |
r-slqpcr
|
1.70.0-1 |
0 |
0.00
|
Functions for analysis of real-time quantitative PCR data at SIRS-Lab GmbH |
BioArchLinuxBot
|
2024-05-02 03:34 (UTC) |
r-slinky
|
1.12.0-5 |
0 |
0.00
|
Putting the fun in LINCS L1000 data analysis |
BioArchLinuxBot
|
2022-06-08 06:03 (UTC) |
r-slingshot
|
2.12.0-1 |
0 |
0.00
|
Tools for ordering single-cell sequencing |
BioArchLinuxBot
|
2024-05-03 00:14 (UTC) |
r-slider
|
0.3.1-1 |
0 |
0.00
|
Sliding Window Functions |
BioArchLinuxBot
|
2023-10-12 18:03 (UTC) |
r-slgi
|
1.56.0-4 |
0 |
0.00
|
Synthetic Lethal Genetic Interaction |
BioArchLinuxBot
|
2022-11-04 06:38 (UTC) |
r-slam
|
0.1.50-13 |
2 |
0.00
|
Sparse Lightweight Arrays and Matrices |
BioArchLinuxBot
|
2024-04-24 19:06 (UTC) |
r-slalom
|
1.26.0-1 |
0 |
0.00
|
Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 12:22 (UTC) |
r-skmeans
|
0.2.16-2 |
0 |
0.00
|
Spherical k-Means Clustering |
BioArchLinuxBot
|
2024-04-11 18:14 (UTC) |
r-skewr
|
1.36.0-1 |
0 |
0.00
|
Visualize Intensities Produced by Illumina's Human Methylation 450k BeadChip |
BioArchLinuxBot
|
2024-05-03 15:25 (UTC) |
r-skewhyperbolic
|
0.4.2-1 |
1 |
0.10
|
The Skew Hyperbolic Student t-Distribution |
BioArchLinuxBot
|
2023-11-26 06:58 (UTC) |
r-sjmisc
|
2.8.9-4 |
0 |
0.00
|
Data and Variable Transformation Functions |
BioArchLinuxBot
|
2022-06-06 15:19 (UTC) |
r-sjlabelled
|
1.2.0-3 |
0 |
0.00
|
Labelled Data Utility Functions |
BioArchLinuxBot
|
2022-06-06 15:18 (UTC) |
r-sizepower
|
1.74.0-1 |
0 |
0.00
|
Sample Size and Power Calculation in Micorarray Studies |
BioArchLinuxBot
|
2024-05-02 03:15 (UTC) |