r-openprimer
|
1.26.0-1 |
0 |
0.00
|
Multiplex PCR Primer Design and Analysis |
BioArchLinuxBot
|
2024-05-04 12:11 (UTC) |
r-openprimerui
|
1.26.0-1 |
0 |
0.00
|
Shiny Application for Multiplex PCR Primer Design and Analysis |
BioArchLinuxBot
|
2024-05-04 12:25 (UTC) |
r-openssl
|
2.1.2-1 |
1 |
0.00
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Encryption, Signatures and Certificates Based on OpenSSLi |
peippo
|
2024-04-22 08:39 (UTC) |
r-openstats
|
1.16.0-1 |
0 |
0.00
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A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association |
BioArchLinuxBot
|
2024-05-01 21:42 (UTC) |
r-openxlsx
|
4.2.5.2-1 |
1 |
0.00
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Read, Write and Edit xlsx Files |
BioArchLinuxBot
|
2023-02-06 18:02 (UTC) |
r-operator.tools
|
1.6.3-11 |
0 |
0.00
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Utilities for Working with R's Operators |
BioArchLinuxBot
|
2024-02-29 18:06 (UTC) |
r-opossom
|
2.22.0-1 |
0 |
0.00
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Comprehensive analysis of transcriptome data |
BioArchLinuxBot
|
2024-05-02 23:17 (UTC) |
r-oppar
|
1.32.0-1 |
0 |
0.00
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Outlier profile and pathway analysis in R |
BioArchLinuxBot
|
2024-05-03 18:34 (UTC) |
r-oppti
|
1.18.0-1 |
0 |
0.00
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Outlier Protein and Phosphosite Target Identifier |
BioArchLinuxBot
|
2024-05-01 21:46 (UTC) |
r-optextras
|
2019.12.4-7 |
0 |
0.00
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Tools to Support Optimization Possibly with Bounds and Masks |
BioArchLinuxBot
|
2024-04-09 12:13 (UTC) |
r-optimalflow
|
1.16.0-1 |
0 |
0.00
|
optimalFlow |
BioArchLinuxBot
|
2024-05-01 23:39 (UTC) |
r-optimalflowdata
|
1.16.0-1 |
0 |
0.00
|
optimalFlowData |
BioArchLinuxBot
|
2024-05-04 00:21 (UTC) |
r-optimparallel
|
1.0.2-3 |
0 |
0.00
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Parallel Version of the L-BFGS-B Optimization Method |
pekkarr
|
2024-04-25 08:33 (UTC) |
r-optimx
|
2023.10.21-2 |
0 |
0.00
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Expanded Replacement and Extension of the 'optim' Function |
BioArchLinuxBot
|
2024-04-25 08:27 (UTC) |
r-optparse
|
1.7.3-1 |
0 |
0.00
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R command line parser inspired by Python's 'optparse' |
gnaggnoyil
|
2023-06-15 07:37 (UTC) |
r-opweight
|
1.26.0-1 |
0 |
0.00
|
Optimal p-value weighting with independent information |
BioArchLinuxBot
|
2024-05-01 23:25 (UTC) |
r-orcme
|
2.0.2-7 |
0 |
0.00
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Order Restricted Clustering for Microarray Experiments |
BioArchLinuxBot
|
2024-04-09 12:15 (UTC) |
r-orderedlist
|
1.76.0-1 |
0 |
0.00
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Similarities of Ordered Gene Lists |
BioArchLinuxBot
|
2024-05-01 18:43 (UTC) |
r-ordinal
|
2023.12.4-2 |
0 |
0.00
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Regression Models for Ordinal Data |
pekkarr
|
2024-04-25 07:18 (UTC) |
r-ore
|
1.7.4.1-2 |
0 |
0.00
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An R Interface to the Onigmo Regular Expression Library |
BioArchLinuxBot
|
2024-03-15 14:10 (UTC) |
r-orfhunter
|
1.12.0-1 |
0 |
0.00
|
Predict open reading frames in nucleotide sequences |
BioArchLinuxBot
|
2024-05-03 03:21 (UTC) |
r-orfik
|
1.24.0-1 |
0 |
0.00
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Open Reading Frames in Genomics |
BioArchLinuxBot
|
2024-05-03 18:14 (UTC) |
r-org.bt.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Bovine |
BioArchLinuxBot
|
2024-05-04 12:02 (UTC) |
r-org.ce.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Worm |
pekkarr
|
2024-05-04 12:03 (UTC) |
r-org.dm.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Fly |
BioArchLinuxBot
|
2024-05-03 18:08 (UTC) |
r-org.dr.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Zebrafish |
BioArchLinuxBot
|
2024-05-03 18:07 (UTC) |
r-org.hs.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Human |
BioArchLinuxBot
|
2024-05-02 18:42 (UTC) |
r-org.mm.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Mouse |
BioArchLinuxBot
|
2024-05-02 18:43 (UTC) |
r-org.rn.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Rat |
BioArchLinuxBot
|
2024-05-02 18:45 (UTC) |
r-org.sc.sgd.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Yeast |
BioArchLinuxBot
|
2024-05-02 18:46 (UTC) |
r-organism.dplyr
|
1.32.0-1 |
0 |
0.00
|
dplyr-based Access to Bioconductor Annotation Resources |
BioArchLinuxBot
|
2024-05-03 02:27 (UTC) |
r-organismdbi
|
1.46.0-1 |
0 |
0.00
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Software to enable the smooth interfacing of different database packages |
BioArchLinuxBot
|
2024-05-03 12:08 (UTC) |
r-orgmassspecr
|
0.5.3-8 |
0 |
0.00
|
Organic Mass Spectrometry |
BioArchLinuxBot
|
2024-04-24 21:33 (UTC) |
r-oriclust
|
1.0.2-4 |
0 |
0.00
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Order-Restricted Information Criterion-Based Clustering Algorithm |
BioArchLinuxBot
|
2024-03-07 12:10 (UTC) |
r-origami
|
1.0.7-1 |
0 |
0.00
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Generalized Framework for Cross-Validation |
BioArchLinuxBot
|
2022-10-20 00:02 (UTC) |
r-orqa
|
0.2.1-4 |
0 |
0.00
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Order Restricted Assessment Of Microarray Titration Experiments |
BioArchLinuxBot
|
2022-06-06 09:44 (UTC) |
r-orthogene
|
1.10.0-1 |
0 |
0.00
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Interspecies gene mapping |
BioArchLinuxBot
|
2024-05-02 01:06 (UTC) |
r-orthos
|
1.2.0-1 |
0 |
0.00
|
`orthos` is an R package for variance decomposition using conditional variational auto-encoders |
pekkarr
|
2024-05-04 01:25 (UTC) |
r-orthosdata
|
1.2.0-1 |
0 |
0.00
|
Data for the orthos package |
pekkarr
|
2024-05-04 01:05 (UTC) |
r-osat
|
1.52.0-1 |
0 |
0.00
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Optimal Sample Assignment Tool |
BioArchLinuxBot
|
2024-05-02 04:15 (UTC) |
r-oscope
|
1.34.0-1 |
0 |
0.00
|
Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq |
BioArchLinuxBot
|
2024-05-01 19:49 (UTC) |
r-osfr
|
0.2.9-3 |
0 |
0.00
|
Interface to the 'Open Science Framework' ('OSF') |
BioArchLinuxBot
|
2022-11-26 14:38 (UTC) |
r-osqp
|
0.6.3.2-2 |
0 |
0.00
|
Quadratic Programming Solver using the 'OSQP' Library |
BioArchLinuxBot
|
2024-04-25 07:23 (UTC) |
r-otubase
|
1.54.0-1 |
0 |
0.00
|
Provides structure and functions for the analysis of OTU data |
BioArchLinuxBot
|
2024-05-03 01:23 (UTC) |
r-outliers
|
0.15-9 |
0 |
0.00
|
Tests for Outliers |
BioArchLinuxBot
|
2024-04-24 19:59 (UTC) |
r-outrider
|
1.22.0-1 |
0 |
0.00
|
OUTlier in RNA-Seq fInDER |
BioArchLinuxBot
|
2024-05-04 12:16 (UTC) |
r-outsplice
|
1.2.0-3 |
0 |
0.00
|
Comparison of Splicing Events between Tumor and Normal Samples |
pekkarr
|
2024-04-28 20:28 (UTC) |
r-oveseg
|
1.20.0-1 |
0 |
0.00
|
OVESEG-test to detect tissue/cell-specific markers |
BioArchLinuxBot
|
2024-05-02 19:26 (UTC) |
r-paa
|
1.38.0-1 |
0 |
0.00
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PAA (Protein Array Analyzer) |
BioArchLinuxBot
|
2024-05-02 02:41 (UTC) |
r-packfinder
|
1.16.0-1 |
0 |
0.00
|
de novo Annotation of Pack-TYPE Transposable Elements |
BioArchLinuxBot
|
2024-05-02 00:25 (UTC) |
r-padma
|
1.14.0-1 |
0 |
0.00
|
Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis |
BioArchLinuxBot
|
2024-05-02 22:29 (UTC) |
r-padog
|
1.46.0-1 |
0 |
0.00
|
Pathway Analysis with Down-weighting of Overlapping Genes (PADOG) |
BioArchLinuxBot
|
2024-05-02 21:08 (UTC) |
r-pagerank
|
1.14.0-1 |
0 |
0.00
|
Temporal and Multiplex PageRank for Gene Regulatory Network Analysis |
BioArchLinuxBot
|
2024-05-03 19:15 (UTC) |
r-paintmap
|
1.0-9 |
0 |
0.00
|
Plotting Paintmaps |
BioArchLinuxBot
|
2024-03-14 18:11 (UTC) |
r-pairadise
|
1.20.0-1 |
0 |
0.00
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PAIRADISE: Paired analysis of differential isoform expression |
BioArchLinuxBot
|
2024-05-02 19:28 (UTC) |
r-paircompviz
|
1.42.0-1 |
0 |
0.00
|
Multiple comparison test visualization |
BioArchLinuxBot
|
2024-05-01 18:47 (UTC) |
r-paireddata
|
1.1.1-4 |
0 |
0.00
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Paired Data Analysis |
BioArchLinuxBot
|
2022-06-06 09:51 (UTC) |
r-pairedgsea
|
1.4.0-1 |
0 |
0.00
|
Paired DGE and DGS analysis for gene set enrichment analysis |
pekkarr
|
2024-05-03 14:08 (UTC) |
r-pairkat
|
1.10.0-1 |
0 |
0.00
|
PaIRKAT |
BioArchLinuxBot
|
2024-05-02 19:58 (UTC) |
r-pairsd3
|
0.1.3-2 |
0 |
0.00
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D3 Scatterplot Matrices |
BioArchLinuxBot
|
2022-08-16 22:21 (UTC) |
r-pak
|
0.7.2-1 |
0 |
0.00
|
Another Approach to R Package Installation |
peippo
|
2024-03-18 08:49 (UTC) |
r-paletteer
|
1.6.0-1 |
0 |
0.00
|
Comprehensive Collection of Color Palettes |
pekkarr
|
2024-01-22 00:01 (UTC) |
r-palmerpenguins
|
0.1.1-8 |
1 |
0.00
|
Palmer Archipelago (Antarctica) Penguin Data |
pekkarr
|
2024-04-24 18:18 (UTC) |
r-palr
|
0.4.0-2 |
0 |
0.00
|
Colour Palettes for Data |
pekkarr
|
2024-04-25 14:20 (UTC) |
r-pals
|
1.8-1 |
0 |
0.00
|
Color Palettes, Colormaps, and Tools to Evaluate Them |
BioArchLinuxBot
|
2023-08-23 06:23 (UTC) |
r-pamr
|
1.56.2-1 |
0 |
0.00
|
Pam: Prediction Analysis for Microarrays |
BioArchLinuxBot
|
2024-04-20 12:02 (UTC) |
r-pan
|
1.9-3 |
0 |
0.00
|
Multiple Imputation for Multivariate Panel or Clustered Data |
pekkarr
|
2024-04-24 20:20 (UTC) |
r-pandar
|
1.36.0-1 |
0 |
0.00
|
PANDA Algorithm |
BioArchLinuxBot
|
2024-05-01 21:23 (UTC) |
r-pander
|
0.6.5-3 |
0 |
0.00
|
An R 'Pandoc' Writer |
BioArchLinuxBot
|
2022-06-06 09:53 (UTC) |
r-panelcn.mops
|
1.26.0-1 |
0 |
0.00
|
CNV detection tool for targeted NGS panel data |
BioArchLinuxBot
|
2024-05-02 01:56 (UTC) |
r-panomir
|
1.8.0-1 |
0 |
0.00
|
Detection of miRNAs that regulate interacting groups of pathways |
pekkarr
|
2024-05-03 12:28 (UTC) |
r-panp
|
1.74.0-1 |
0 |
0.00
|
Presence-Absence Calls from Negative Strand Matching Probesets |
BioArchLinuxBot
|
2024-05-01 22:41 (UTC) |
r-panr
|
1.50.0-1 |
0 |
0.00
|
Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations |
BioArchLinuxBot
|
2024-05-02 18:32 (UTC) |
r-panviz
|
1.6.0-1 |
0 |
0.00
|
Integrating Multi-Omic Network Data With Summay-Level GWAS Data |
pekkarr
|
2024-05-02 05:37 (UTC) |
r-panvizgenerator
|
1.22.0-4 |
0 |
0.00
|
Generate PanViz visualisations from your pangenome |
BioArchLinuxBot
|
2022-07-07 06:06 (UTC) |
r-paper
|
1.0.5-2 |
0 |
0.00
|
A Toolbox for Writing Pretty Papers and Reports |
BioArchLinuxBot
|
2022-08-18 01:05 (UTC) |
r-paradox
|
0.11.1-1 |
0 |
0.00
|
Define and Work with Parameter Spaces for Complex Algorithms |
BioArchLinuxBot
|
2023-03-17 18:02 (UTC) |
r-paralleldist
|
0.2.6-8 |
0 |
0.00
|
Parallel Distance Matrix Computation using Multiple Threads |
BioArchLinuxBot
|
2024-02-08 12:09 (UTC) |
r-parallellogger
|
3.3.0-3 |
0 |
0.00
|
Support for Parallel Computation, Logging, and Function Automation |
BioArchLinuxBot
|
2023-10-26 18:24 (UTC) |
r-parallelly
|
1.37.1-1 |
0 |
0.00
|
Enhancing the 'parallel' Package |
pekkarr
|
2024-03-17 13:16 (UTC) |
r-parallelmap
|
1.5.1-4 |
0 |
0.00
|
Unified Interface to Parallelization Back-Ends |
BioArchLinuxBot
|
2022-06-06 09:56 (UTC) |
r-parameters
|
0.21.6-2 |
0 |
0.00
|
Processing of Model Parameters |
BioArchLinuxBot
|
2024-03-18 18:11 (UTC) |
r-paramhelpers
|
1.14.1-4 |
0 |
0.00
|
Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning |
BioArchLinuxBot
|
2022-11-26 12:51 (UTC) |
r-parglms
|
1.36.0-1 |
0 |
0.00
|
support for parallelized estimation of GLMs/GEEs |
BioArchLinuxBot
|
2024-05-01 23:50 (UTC) |
r-parmigene
|
1.1.0-7 |
0 |
0.00
|
Parallel Mutual Information Estimation for Gene Network Reconstruction |
BioArchLinuxBot
|
2024-03-08 18:07 (UTC) |
r-parody
|
1.62.0-1 |
0 |
0.00
|
Parametric And Resistant Outlier DYtection |
BioArchLinuxBot
|
2024-05-02 03:36 (UTC) |
r-parsedate
|
1.3.1-2 |
0 |
0.00
|
Recognize and Parse Dates in Various Formats |
peippo
|
2023-03-26 16:00 (UTC) |
r-parsnip
|
1.2.1-2 |
0 |
0.00
|
A Common API to Modeling and Analysis Functions |
pekkarr
|
2024-04-27 18:03 (UTC) |
r-partcnv
|
1.2.0-1 |
0 |
0.00
|
Infer locally aneuploid cells using single cell RNA-seq data |
pekkarr
|
2024-05-03 00:04 (UTC) |
r-partitions
|
1.10.7-1 |
0 |
0.00
|
Additive Partitions of Integers |
BioArchLinuxBot
|
2022-07-21 12:01 (UTC) |
r-party
|
1.3.15-1 |
0 |
0.00
|
A Laboratory for Recursive Partytioning |
BioArchLinuxBot
|
2024-04-29 18:19 (UTC) |
r-partykit
|
1.2.20-1 |
0 |
0.00
|
A Toolkit for Recursive Partytioning |
BioArchLinuxBot
|
2023-04-14 12:03 (UTC) |
r-pasilla
|
1.32.0-1 |
0 |
0.00
|
Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. |
BioArchLinuxBot
|
2024-05-03 13:45 (UTC) |
r-past
|
1.20.0-1 |
0 |
0.00
|
Pathway Association Study Tool (PAST) |
BioArchLinuxBot
|
2024-05-03 01:08 (UTC) |
r-pastecs
|
1.4.2-1 |
0 |
0.00
|
Package for Analysis of Space-Time Ecological Series |
BioArchLinuxBot
|
2024-02-02 00:01 (UTC) |
r-patchwork
|
1.2.0-1 |
0 |
0.00
|
The Composer of Plots |
BioArchLinuxBot
|
2024-01-08 18:03 (UTC) |
r-path2ppi
|
1.34.0-1 |
0 |
0.00
|
Prediction of pathway-related protein-protein interaction networks |
BioArchLinuxBot
|
2024-05-01 21:27 (UTC) |
r-pathifier
|
1.42.0-1 |
0 |
0.00
|
Quantify deregulation of pathways in cancer |
BioArchLinuxBot
|
2024-05-01 18:55 (UTC) |
r-pathnet
|
1.44.0-1 |
0 |
0.00
|
An R package for pathway analysis using topological information |
BioArchLinuxBot
|
2024-05-02 03:59 (UTC) |
r-pathostat
|
1.30.0-1 |
0 |
0.00
|
PathoStat Statistical Microbiome Analysis Package |
BioArchLinuxBot
|
2024-05-02 22:10 (UTC) |
r-pathrender
|
1.72.0-1 |
0 |
0.00
|
Render molecular pathways |
BioArchLinuxBot
|
2024-05-02 01:29 (UTC) |
r-pathvar
|
1.30.0-2 |
0 |
0.00
|
Methods to Find Pathways with Significantly Different Variability |
BioArchLinuxBot
|
2024-02-11 12:05 (UTC) |
r-pathview
|
1.44.0-1 |
0 |
0.00
|
a tool set for pathway based data integration and visualization |
BioArchLinuxBot
|
2024-05-02 21:00 (UTC) |
r-pathwaypca
|
1.20.0-1 |
0 |
0.00
|
Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection |
BioArchLinuxBot
|
2024-05-02 04:39 (UTC) |
r-paws.common
|
0.7.2-1 |
0 |
0.00
|
Paws Low-Level Amazon Web Services API |
pekkarr
|
2024-04-09 18:04 (UTC) |
r-paws.storage
|
0.5.0-1 |
0 |
0.00
|
'Amazon Web Services' Storage Services |
pekkarr
|
2024-01-10 06:04 (UTC) |
r-paxtoolsr
|
1.36.0-1 |
0 |
0.00
|
Access Pathways from Multiple Databases Through BioPAX and Pathway Commons |
BioArchLinuxBot
|
2023-10-26 00:00 (UTC) |
r-pbapply
|
1.7.2-3 |
0 |
0.00
|
Adding Progress Bar to '*apply' Functions |
BioArchLinuxBot
|
2024-04-24 18:58 (UTC) |
r-pbdmpi
|
0.5.1-2 |
0 |
0.00
|
R Interface to MPI for HPC Clusters (Programming with Big Data Project) |
pekkarr
|
2024-04-25 01:21 (UTC) |
r-pbdzmq
|
0.3.10-1 |
0 |
0.00
|
Programming with Big Data – Interface to 'ZeroMQ' |
portaloffreedom
|
2023-12-18 16:07 (UTC) |
r-pbivnorm
|
0.6.0-12 |
0 |
0.00
|
Vectorized Bivariate Normal CDF |
BioArchLinuxBot
|
2024-03-08 18:04 (UTC) |
r-pbkrtest
|
0.5.2-3 |
1 |
0.00
|
Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models |
BioArchLinuxBot
|
2023-02-09 18:29 (UTC) |
r-pbmcapply
|
1.5.1-5 |
0 |
0.00
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Tracking the Progress of Mc*pply with Progress Bar |
BioArchLinuxBot
|
2024-04-24 21:16 (UTC) |
r-pcaexplorer
|
2.30.0-1 |
0 |
0.00
|
Interactive Visualization of RNA-seq Data Using a Principal Components Approach |
BioArchLinuxBot
|
2024-05-03 14:35 (UTC) |
r-pcal1
|
1.5.7-3 |
0 |
0.00
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L1-Norm PCA Methods |
pekkarr
|
2024-04-24 19:32 (UTC) |
r-pcalg
|
2.7.11-1 |
0 |
0.00
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Methods for Graphical Models and Causal Inference |
BioArchLinuxBot
|
2024-02-12 18:10 (UTC) |
r-pcamethods
|
1.96.0-1 |
0 |
0.00
|
A collection of PCA methods |
BioArchLinuxBot
|
2024-05-01 18:22 (UTC) |
r-pcan
|
1.32.0-1 |
0 |
0.00
|
Phenotype Consensus ANalysis (PCAN) |
BioArchLinuxBot
|
2024-05-01 19:48 (UTC) |
r-pcapp
|
2.0.4-2 |
0 |
0.00
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Robust PCA by Projection Pursuit |
BioArchLinuxBot
|
2024-04-07 18:02 (UTC) |
r-pcatools
|
2.16.0-1 |
0 |
0.00
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PCAtools: Everything Principal Components Analysis |
BioArchLinuxBot
|
2024-05-02 13:24 (UTC) |
r-pcict
|
0.5.4.4-1 |
0 |
0.00
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Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars |
pekkarr
|
2024-02-12 17:44 (UTC) |
r-pcxn
|
2.26.0-1 |
0 |
0.00
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Exploring, analyzing and visualizing functions utilizing the pcxnData package |
BioArchLinuxBot
|
2024-05-01 19:04 (UTC) |
r-pcxndata
|
2.25.0-1 |
0 |
0.00
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Correlation coefficients and p values between pre-defined pathway/gene sets |
BioArchLinuxBot
|
2024-05-02 04:23 (UTC) |
r-pd.mapping50k.xba240
|
3.12.0-3 |
0 |
0.00
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Platform Design Info for Affymetrix Mapping50K_Xba240 |
BioArchLinuxBot
|
2022-06-06 10:11 (UTC) |
r-pdatk
|
1.12.0-1 |
0 |
0.00
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Pancreatic Ductal Adenocarcinoma Tool-Kit |
BioArchLinuxBot
|
2024-05-03 00:41 (UTC) |
r-pdfcluster
|
1.0.4-3 |
0 |
0.00
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Cluster Analysis via Nonparametric Density Estimation |
pekkarr
|
2024-04-25 14:17 (UTC) |
r-pdftools
|
3.4.0-3 |
0 |
0.00
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Text Extraction, Rendering and Converting of PDF Documents |
BioArchLinuxBot
|
2024-04-25 10:11 (UTC) |
r-pdinfobuilder
|
1.68.0-1 |
0 |
0.00
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Platform Design Information Package Builder |
BioArchLinuxBot
|
2024-05-03 00:26 (UTC) |
r-pdist
|
1.2.1-7 |
0 |
0.00
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Partitioned Distance Function |
BioArchLinuxBot
|
2024-04-24 19:45 (UTC) |
r-peacoqc
|
1.14.0-1 |
0 |
0.00
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Peak-based selection of high quality cytometry data |
BioArchLinuxBot
|
2024-05-02 13:20 (UTC) |
r-peakpanther
|
1.16.1-1 |
0 |
0.00
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Peak Picking and Annotation of High Resolution Experiments |
BioArchLinuxBot
|
2024-02-29 00:06 (UTC) |
r-peca
|
1.40.0-1 |
0 |
0.00
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Probe-level Expression Change Averaging |
BioArchLinuxBot
|
2024-05-02 02:11 (UTC) |
r-peco
|
1.16.0-1 |
0 |
0.00
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A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data |
BioArchLinuxBot
|
2024-05-03 01:51 (UTC) |
r-pema
|
0.1.3-5 |
0 |
0.00
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Penalized Meta-Analysis |
BioArchLinuxBot
|
2024-02-08 13:47 (UTC) |
r-penalized
|
0.9.52-1 |
0 |
0.00
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L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model |
BioArchLinuxBot
|
2022-06-06 10:13 (UTC) |
r-pengls
|
1.10.0-1 |
0 |
0.00
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Fit Penalised Generalised Least Squares models |
BioArchLinuxBot
|
2024-05-01 19:50 (UTC) |
r-pepsnmr
|
1.22.0-1 |
0 |
0.00
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Pre-process 1H-NMR FID signals |
BioArchLinuxBot
|
2024-05-01 20:25 (UTC) |
r-pepstat
|
1.38.0-1 |
0 |
0.00
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Statistical analysis of peptide microarrays |
BioArchLinuxBot
|
2024-05-01 22:18 (UTC) |
r-peptides
|
2.4.6-1 |
0 |
0.00
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Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
BioArchLinuxBot
|
2023-12-14 00:13 (UTC) |
r-pepxmltab
|
1.38.0-1 |
0 |
0.00
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Parsing pepXML files and filter based on peptide FDR |
BioArchLinuxBot
|
2024-05-02 04:34 (UTC) |
r-perfect
|
1.16.0-1 |
0 |
0.00
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Permutation filtration for microbiome data |
BioArchLinuxBot
|
2024-04-13 18:10 (UTC) |
r-performance
|
0.11.0-1 |
0 |
0.00
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Assessment of Regression Models Performance |
BioArchLinuxBot
|
2024-03-23 12:13 (UTC) |
r-performanceanalytics
|
2.0.4-4 |
0 |
0.00
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Econometric Tools for Performance and Risk Analysis |
BioArchLinuxBot
|
2022-06-06 10:16 (UTC) |
r-periodicdna
|
1.14.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2024-05-03 03:08 (UTC) |
r-permute
|
0.9.7-13 |
0 |
0.00
|
Functions for Generating Restricted Permutations of Data |
BioArchLinuxBot
|
2024-04-24 19:21 (UTC) |
r-pfam.db
|
3.19.1-1 |
0 |
0.00
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A set of protein ID mappings for PFAM |
BioArchLinuxBot
|
2024-05-03 18:09 (UTC) |
r-pfamanalyzer
|
1.4.0-1 |
0 |
0.00
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Identification of domain isotypes in pfam data |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-pfp
|
1.7.0-2 |
0 |
0.00
|
Pathway Fingerprint Framework in R |
BioArchLinuxBot
|
2024-02-13 18:06 (UTC) |
r-pgca
|
1.28.0-1 |
0 |
0.00
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An Algorithm to Link Protein Groups Created from MS/MS Data |
BioArchLinuxBot
|
2024-05-02 04:07 (UTC) |
r-phangorn
|
2.11.1-3 |
0 |
0.00
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Phylogenetic Reconstruction and Analysis |
BioArchLinuxBot
|
2023-02-09 18:07 (UTC) |
r-phantasus
|
1.22.2-1 |
0 |
0.00
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Visual and interactive gene expression analysis |
BioArchLinuxBot
|
2023-11-18 00:28 (UTC) |
r-phantasuslite
|
1.0.0-3 |
0 |
0.00
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Loading and annotation RNA-Seq counts matrices |
pekkarr
|
2024-04-27 02:21 (UTC) |
r-pharmacogx
|
3.8.0-1 |
0 |
0.00
|
Analysis of Large-Scale Pharmacogenomic Data |
BioArchLinuxBot
|
2024-05-03 00:40 (UTC) |
r-phastcons100way.ucsc.hg19
|
3.7.2-3 |
0 |
0.00
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UCSC phastCons conservation scores for hg19 |
BioArchLinuxBot
|
2022-06-06 10:20 (UTC) |
r-phastcons100way.ucsc.hg38
|
3.7.1-3 |
0 |
0.00
|
UCSC phastCons conservation scores for hg38 |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phater
|
1.0.7-3 |
0 |
0.00
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PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-pheatmap
|
1.0.12-4 |
0 |
0.00
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Pretty Heatmaps |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phemd
|
1.18.0-2 |
0 |
0.00
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Phenotypic EMD for comparison of single-cell samples |
BioArchLinuxBot
|
2024-04-28 18:00 (UTC) |
r-phenogeneranker
|
1.12.0-1 |
0 |
0.00
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PhenoGeneRanker: A gene and phenotype prioritization tool |
BioArchLinuxBot
|
2024-05-01 23:41 (UTC) |
r-phenomis
|
1.6.0-1 |
0 |
0.00
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Postprocessing and univariate analysis of omics data |
pekkarr
|
2024-05-03 00:35 (UTC) |
r-phenopath
|
1.28.0-1 |
0 |
0.00
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Genomic trajectories with heterogeneous genetic and environmental backgrounds |
BioArchLinuxBot
|
2024-05-02 19:44 (UTC) |
r-phenotest
|
1.52.0-1 |
0 |
0.00
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Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2024-05-03 13:09 (UTC) |
r-phenstat
|
2.40.0-1 |
0 |
0.00
|
Statistical analysis of phenotypic data |
BioArchLinuxBot
|
2024-05-01 20:40 (UTC) |
r-philentropy
|
0.8.0-1 |
0 |
0.00
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Similarity and Distance Quantification Between Probability Functions |
BioArchLinuxBot
|
2023-12-02 18:03 (UTC) |
r-philr
|
1.30.0-1 |
0 |
0.00
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Phylogenetic partitioning based ILR transform for metagenomics data |
BioArchLinuxBot
|
2024-05-02 01:08 (UTC) |
r-phipdata
|
1.12.0-1 |
0 |
0.00
|
Container for PhIP-Seq Experiments |
BioArchLinuxBot
|
2024-05-02 20:10 (UTC) |
r-phosphonormalizer
|
1.28.0-1 |
0 |
0.00
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Compensates for the bias introduced by median normalization in |
BioArchLinuxBot
|
2024-05-01 19:10 (UTC) |
r-phosphoricons
|
0.2.1-1 |
0 |
0.00
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'Phosphor' Icons for R |
BioArchLinuxBot
|
2024-04-08 12:01 (UTC) |
r-phosr
|
1.14.0-1 |
0 |
0.00
|
A set of methods and tools for comprehensive analysis of phosphoproteomics data |
BioArchLinuxBot
|
2024-05-02 19:08 (UTC) |
r-phyclust
|
0.1.34-1 |
0 |
0.00
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Phylogenetic Clustering (Phyloclustering) |
BioArchLinuxBot
|
2023-09-06 06:07 (UTC) |
r-phylobase
|
0.8.12-1 |
0 |
0.00
|
Base Package for Phylogenetic Structures and Comparative Data |
BioArchLinuxBot
|
2024-01-30 06:23 (UTC) |
r-phylogram
|
2.1.0-4 |
0 |
0.00
|
Dendrograms for Evolutionary Analysis |
BioArchLinuxBot
|
2022-06-06 10:27 (UTC) |
r-phylolm
|
2.6.2-1 |
0 |
0.00
|
Phylogenetic Linear Regression |
BioArchLinuxBot
|
2022-06-06 10:28 (UTC) |
r-phyloprofile
|
1.16.5-1 |
0 |
0.00
|
PhyloProfile |
BioArchLinuxBot
|
2024-04-18 00:05 (UTC) |
r-phyloseq
|
1.48.0-1 |
0 |
0.00
|
Handling and analysis of high-throughput microbiome census data |
BioArchLinuxBot
|
2024-05-02 00:01 (UTC) |
r-phytools
|
2.1.1-2 |
0 |
0.00
|
Phylogenetic Tools for Comparative Biology (and Other Things) |
pekkarr
|
2024-04-25 14:29 (UTC) |
r-pi
|
2.14.0-2 |
0 |
0.00
|
Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level |
BioArchLinuxBot
|
2024-04-15 18:30 (UTC) |
r-piano
|
2.20.0-1 |
0 |
0.00
|
Platform for integrative analysis of omics data |
BioArchLinuxBot
|
2024-05-02 02:19 (UTC) |
r-picante
|
1.8.2-4 |
0 |
0.00
|
Integrating Phylogenies and Ecology |
BioArchLinuxBot
|
2022-06-06 10:30 (UTC) |
r-pickgene
|
1.76.0-1 |
0 |
0.00
|
Adaptive Gene Picking for Microarray Expression Data Analysis |
BioArchLinuxBot
|
2024-05-02 04:10 (UTC) |
r-pics
|
2.48.0-1 |
0 |
0.00
|
Probabilistic inference of ChIP-seq |
BioArchLinuxBot
|
2024-05-02 23:38 (UTC) |
r-pigengene
|
1.30.0-1 |
0 |
0.00
|
Infers biological signatures from gene expression data |
BioArchLinuxBot
|
2024-05-03 04:14 (UTC) |
r-pillar
|
1.9.0-1 |
2 |
0.00
|
Coloured Formatting for Columns |
greyltc
|
2023-03-26 17:39 (UTC) |
r-pinfsc50
|
1.3.0-2 |
0 |
0.00
|
Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
BioArchLinuxBot
|
2024-03-16 18:08 (UTC) |
r-ping
|
2.48.0-1 |
0 |
0.00
|
Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data |
BioArchLinuxBot
|
2024-05-03 06:04 (UTC) |
r-pingr
|
2.0.3-2 |
0 |
0.00
|
Check if a Remote Computer is Up |
pekkarr
|
2024-04-25 07:43 (UTC) |
r-pipecomp
|
1.14.0-1 |
0 |
0.00
|
pipeComp pipeline benchmarking framework |
BioArchLinuxBot
|
2024-05-03 01:46 (UTC) |
r-pipeframe
|
1.20.0-1 |
0 |
0.00
|
Pipeline framework for bioinformatics in R |
BioArchLinuxBot
|
2024-05-03 03:09 (UTC) |
r-pixmap
|
0.4.13-1 |
0 |
0.00
|
Bitmap Images / Pixel Maps |
BioArchLinuxBot
|
2024-05-03 18:20 (UTC) |
r-pkgbuild
|
1.4.4-1 |
2 |
0.00
|
Find Tools Needed to Build R Packages |
greyltc
|
2024-03-18 08:25 (UTC) |
r-pkgcache
|
2.2.2-1 |
0 |
0.00
|
Cache ‘CRAN’-Like Metadata and R Packages |
peippo
|
2024-04-09 12:10 (UTC) |
r-pkgconfig
|
2.0.3-14 |
2 |
0.00
|
Private Configuration for 'R' Packages |
BioArchLinuxBot
|
2024-04-24 18:04 (UTC) |
r-pkgdepends
|
0.7.1-1 |
0 |
0.00
|
Cache ‘CRAN’-Like Metadata and R Packages |
peippo
|
2023-12-11 12:39 (UTC) |
r-pkgdeptools
|
1.63.0-3 |
0 |
0.00
|
Package Dependency Tools |
BioArchLinuxBot
|
2023-11-05 18:01 (UTC) |
r-pkgdown
|
2.0.9-1 |
0 |
0.00
|
Make Static HTML Documentation for a Package |
BioArchLinuxBot
|
2024-04-19 01:05 (UTC) |
r-pkgkitten
|
0.2.3-1 |
0 |
0.00
|
Create Simple Packages Which Do not Upset R Package Checks |
pekkarr
|
2024-03-20 18:02 (UTC) |
r-pkgload
|
1.3.4-1 |
3 |
0.00
|
Simulate Package Installation and Attach |
greyltc
|
2024-01-17 07:28 (UTC) |
r-pkgmaker
|
0.32.10-1 |
0 |
0.00
|
Development Utilities for R Packages |
BioArchLinuxBot
|
2023-05-03 12:02 (UTC) |
r-pkgsearch
|
3.1.3-1 |
0 |
0.00
|
Search and Query CRAN R Packages |
peippo
|
2023-12-11 12:34 (UTC) |
r-planet
|
1.12.0-1 |
0 |
0.00
|
Placental DNA methylation analysis tools |
BioArchLinuxBot
|
2024-05-01 20:06 (UTC) |
r-plasmut
|
1.2.0-1 |
0 |
0.00
|
Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-plethy
|
1.36.0-3 |
0 |
0.00
|
R framework for exploration and analysis of respirometry data |
BioArchLinuxBot
|
2024-02-12 12:06 (UTC) |
r-plgem
|
1.76.0-1 |
0 |
0.00
|
Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM) |
BioArchLinuxBot
|
2024-05-02 12:24 (UTC) |
r-plier
|
1.74.0-1 |
0 |
0.00
|
Implements the Affymetrix PLIER algorithm |
BioArchLinuxBot
|
2024-05-01 22:39 (UTC) |
r-plm
|
2.6.4-1 |
0 |
0.00
|
Linear Models for Panel Data |
pekkarr
|
2024-04-02 00:03 (UTC) |
r-plogo2
|
1.14.0-1 |
0 |
0.00
|
Plot Gene Ontology and KEGG pathway Annotation and Abundance |
BioArchLinuxBot
|
2023-10-26 06:03 (UTC) |
r-plogr
|
0.2.0-12 |
0 |
0.00
|
The 'plog' C++ Logging Library |
pekkarr
|
2024-04-24 18:18 (UTC) |
r-plot3d
|
1.4.1-2 |
0 |
0.00
|
Plotting Multi-Dimensional Data |
BioArchLinuxBot
|
2024-04-14 12:19 (UTC) |
r-plot3drgl
|
1.0.4-2 |
0 |
0.00
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Plotting Multi-Dimensional Data - Using 'rgl' |
pekkarr
|
2024-04-25 22:38 (UTC) |
r-plotgardener
|
1.10.0-1 |
0 |
0.00
|
Coordinate-Based Genomic Visualization Package for R |
BioArchLinuxBot
|
2024-05-03 03:31 (UTC) |
r-plotgrouper
|
1.22.0-1 |
0 |
0.00
|
Shiny app GUI wrapper for ggplot with built-in statistical analysis |
BioArchLinuxBot
|
2024-05-01 21:40 (UTC) |
r-plotly
|
4.10.4-1 |
0 |
0.00
|
Create Interactive Web Graphics via 'plotly.js' |
BioArchLinuxBot
|
2024-01-14 00:03 (UTC) |
r-plotmo
|
3.6.3-2 |
0 |
0.00
|
Plot a Model's Residuals, Response, and Partial Dependence Plots |
BioArchLinuxBot
|
2024-04-12 12:08 (UTC) |
r-plotrix
|
3.8.4-3 |
1 |
0.00
|
Various Plotting Functions |
BioArchLinuxBot
|
2024-04-24 19:10 (UTC) |
r-plotroc
|
2.3.1-1 |
0 |
0.00
|
Generate Useful ROC Curve Charts for Print and Interactive Use |
BioArchLinuxBot
|
2023-10-06 18:05 (UTC) |
r-plottools
|
0.3.0-2 |
0 |
0.00
|
Add Continuous Legends to Plots |
BioArchLinuxBot
|
2024-03-16 18:03 (UTC) |
r-plpe
|
1.64.0-1 |
0 |
0.00
|
Local Pooled Error Test for Differential Expression with Paired High-throughput Data |
BioArchLinuxBot
|
2024-05-02 12:34 (UTC) |
r-pls
|
2.8.3-3 |
0 |
0.00
|
Partial Least Squares and Principal Component Regression |
BioArchLinuxBot
|
2024-04-24 19:38 (UTC) |
r-plsgenomics
|
1.5.3-1 |
0 |
0.00
|
PLS Analyses for Genomics |
BioArchLinuxBot
|
2024-03-28 12:02 (UTC) |
r-plsvarsel
|
0.9.11-1 |
0 |
0.00
|
Variable Selection in Partial Least Squares |
BioArchLinuxBot
|
2024-04-23 00:05 (UTC) |
r-plyinteractions
|
1.2.0-1 |
0 |
0.00
|
Extending tidy verbs to genomic interactions |
pekkarr
|
2024-05-03 03:35 (UTC) |
r-plyr
|
1.8.9-3 |
1 |
0.00
|
Tools for Splitting, Applying and Combining Data |
pekkarr
|
2024-04-25 07:05 (UTC) |
r-plyranges
|
1.24.0-1 |
0 |
0.00
|
A fluent interface for manipulating GenomicRanges |
BioArchLinuxBot
|
2024-05-03 00:53 (UTC) |
r-pma
|
1.2.3-2 |
0 |
0.00
|
Penalized Multivariate Analysis |
BioArchLinuxBot
|
2024-03-11 18:11 (UTC) |
r-pmcmr
|
4.4-4 |
0 |
0.00
|
Calculate Pairwise Multiple Comparisons of Mean Rank Sums |
pekkarr
|
2024-04-24 23:26 (UTC) |
r-pmcmrplus
|
1.9.10-1 |
0 |
0.00
|
Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended |
BioArchLinuxBot
|
2023-12-10 18:02 (UTC) |
r-pmm
|
1.36.0-1 |
0 |
0.00
|
Parallel Mixed Model |
BioArchLinuxBot
|
2024-05-01 19:43 (UTC) |
r-pmp
|
1.16.0-1 |
0 |
0.00
|
Peak Matrix Processing and signal batch correction for metabolomics datasets |
BioArchLinuxBot
|
2024-05-02 19:14 (UTC) |
r-png
|
0.1.8-1 |
0 |
0.00
|
Read and write PNG images |
greyltc
|
2022-11-30 09:27 (UTC) |
r-podcall
|
1.12.0-1 |
0 |
0.00
|
Positive Droplet Calling for DNA Methylation Droplet Digital PCR |
BioArchLinuxBot
|
2024-05-01 21:04 (UTC) |
r-podkat
|
1.36.0-1 |
0 |
0.00
|
Position-Dependent Kernel Association Test |
BioArchLinuxBot
|
2024-05-03 03:03 (UTC) |
r-pogos
|
1.24.0-1 |
0 |
0.00
|
PharmacOGenomics Ontology Support |
BioArchLinuxBot
|
2024-05-03 18:44 (UTC) |
r-poibin
|
1.5-8 |
0 |
0.00
|
The Poisson Binomial Distribution |
BioArchLinuxBot
|
2024-04-24 20:38 (UTC) |
r-poiclaclu
|
1.0.2.1-10 |
0 |
0.00
|
Classification and Clustering of Sequencing Data Based on a Poisson Model |
BioArchLinuxBot
|
2024-04-24 20:41 (UTC) |
r-poilog
|
0.4.2-3 |
0 |
0.00
|
Poisson Lognormal and Bivariate Poisson Lognormal Distribution |
BioArchLinuxBot
|
2024-03-16 12:07 (UTC) |
r-poissonbinomial
|
1.2.6-1 |
0 |
0.00
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Efficient Computation of Ordinary and Generalized Poisson Binomial Distributions |
BioArchLinuxBot
|
2023-11-29 18:08 (UTC) |
r-polca
|
1.6.0.1-3 |
0 |
0.00
|
Polytomous Variable Latent Class Analysis |
pekkarr
|
2024-04-25 00:47 (UTC) |
r-polspline
|
1.1.24-2 |
0 |
0.00
|
Polynomial Spline Routines |
BioArchLinuxBot
|
2024-03-15 12:01 (UTC) |
r-polychrome
|
1.5.1-4 |
0 |
0.00
|
Qualitative Palettes with Many Colors |
BioArchLinuxBot
|
2024-04-12 12:12 (UTC) |
r-polyclip
|
1.10.6-1 |
1 |
0.00
|
Polygon Clipping |
BioArchLinuxBot
|
2023-09-27 12:03 (UTC) |
r-polycor
|
0.8.1-6 |
0 |
0.00
|
Polychoric and Polyserial Correlations |
BioArchLinuxBot
|
2024-04-08 18:12 (UTC) |
r-polyester
|
1.39.0-1 |
0 |
0.00
|
Simulate RNA-seq reads |
BioArchLinuxBot
|
2024-05-02 00:19 (UTC) |
r-polylabelr
|
0.2.0-4 |
0 |
0.00
|
Find the Pole of Inaccessibility (Visual Center) of a Polygon |
BioArchLinuxBot
|
2022-06-06 10:46 (UTC) |
r-polynom
|
1.4.1-11 |
1 |
0.00
|
A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations |
BioArchLinuxBot
|
2024-03-01 06:02 (UTC) |
r-polynomf
|
2.0.8-1 |
0 |
0.00
|
Polynomials in R |
BioArchLinuxBot
|
2024-03-03 06:01 (UTC) |
r-polyphen.hsapiens.dbsnp131
|
1.0.2-3 |
0 |
0.00
|
PolyPhen Predictions for Homo sapiens dbSNP build 131 |
BioArchLinuxBot
|
2022-06-06 10:47 (UTC) |
r-poma
|
1.12.0-1 |
0 |
0.00
|
User-friendly Workflow for Metabolomics and Proteomics Data Analysis |
BioArchLinuxBot
|
2023-10-28 14:43 (UTC) |
r-poorman
|
0.2.7-2 |
0 |
0.00
|
A Poor Man's Dependency Free Recreation of 'dplyr' |
BioArchLinuxBot
|
2024-03-14 18:04 (UTC) |
r-posterior
|
1.5.0-1 |
0 |
0.00
|
Tools for Working with Posterior Distributions |
BioArchLinuxBot
|
2023-10-31 12:48 (UTC) |
r-potra
|
1.13.0-4 |
0 |
0.00
|
PoTRA: Pathways of Topological Rank Analysis |
BioArchLinuxBot
|
2023-04-29 05:10 (UTC) |