91559 packages found. Page 271 of 367.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-openprimer 1.26.0-1 0 0.00 Multiplex PCR Primer Design and Analysis BioArchLinuxBot 2024-05-04 12:11 (UTC)
r-openprimerui 1.26.0-1 0 0.00 Shiny Application for Multiplex PCR Primer Design and Analysis BioArchLinuxBot 2024-05-04 12:25 (UTC)
r-openssl 2.1.2-1 1 0.00 Encryption, Signatures and Certificates Based on OpenSSLi peippo 2024-04-22 08:39 (UTC)
r-openstats 1.16.0-1 0 0.00 A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association BioArchLinuxBot 2024-05-01 21:42 (UTC)
r-openxlsx 4.2.5.2-1 1 0.00 Read, Write and Edit xlsx Files BioArchLinuxBot 2023-02-06 18:02 (UTC)
r-operator.tools 1.6.3-11 0 0.00 Utilities for Working with R's Operators BioArchLinuxBot 2024-02-29 18:06 (UTC)
r-opossom 2.22.0-1 0 0.00 Comprehensive analysis of transcriptome data BioArchLinuxBot 2024-05-02 23:17 (UTC)
r-oppar 1.32.0-1 0 0.00 Outlier profile and pathway analysis in R BioArchLinuxBot 2024-05-03 18:34 (UTC)
r-oppti 1.18.0-1 0 0.00 Outlier Protein and Phosphosite Target Identifier BioArchLinuxBot 2024-05-01 21:46 (UTC)
r-optextras 2019.12.4-7 0 0.00 Tools to Support Optimization Possibly with Bounds and Masks BioArchLinuxBot 2024-04-09 12:13 (UTC)
r-optimalflow 1.16.0-1 0 0.00 optimalFlow BioArchLinuxBot 2024-05-01 23:39 (UTC)
r-optimalflowdata 1.16.0-1 0 0.00 optimalFlowData BioArchLinuxBot 2024-05-04 00:21 (UTC)
r-optimparallel 1.0.2-3 0 0.00 Parallel Version of the L-BFGS-B Optimization Method pekkarr 2024-04-25 08:33 (UTC)
r-optimx 2023.10.21-2 0 0.00 Expanded Replacement and Extension of the 'optim' Function BioArchLinuxBot 2024-04-25 08:27 (UTC)
r-optparse 1.7.3-1 0 0.00 R command line parser inspired by Python's 'optparse' gnaggnoyil 2023-06-15 07:37 (UTC)
r-opweight 1.26.0-1 0 0.00 Optimal p-value weighting with independent information BioArchLinuxBot 2024-05-01 23:25 (UTC)
r-orcme 2.0.2-7 0 0.00 Order Restricted Clustering for Microarray Experiments BioArchLinuxBot 2024-04-09 12:15 (UTC)
r-orderedlist 1.76.0-1 0 0.00 Similarities of Ordered Gene Lists BioArchLinuxBot 2024-05-01 18:43 (UTC)
r-ordinal 2023.12.4-2 0 0.00 Regression Models for Ordinal Data pekkarr 2024-04-25 07:18 (UTC)
r-ore 1.7.4.1-2 0 0.00 An R Interface to the Onigmo Regular Expression Library BioArchLinuxBot 2024-03-15 14:10 (UTC)
r-orfhunter 1.12.0-1 0 0.00 Predict open reading frames in nucleotide sequences BioArchLinuxBot 2024-05-03 03:21 (UTC)
r-orfik 1.24.0-1 0 0.00 Open Reading Frames in Genomics BioArchLinuxBot 2024-05-03 18:14 (UTC)
r-org.bt.eg.db 3.19.1-1 0 0.00 Genome wide annotation for Bovine BioArchLinuxBot 2024-05-04 12:02 (UTC)
r-org.ce.eg.db 3.19.1-1 0 0.00 Genome wide annotation for Worm pekkarr 2024-05-04 12:03 (UTC)
r-org.dm.eg.db 3.19.1-1 0 0.00 Genome wide annotation for Fly BioArchLinuxBot 2024-05-03 18:08 (UTC)
r-org.dr.eg.db 3.19.1-1 0 0.00 Genome wide annotation for Zebrafish BioArchLinuxBot 2024-05-03 18:07 (UTC)
r-org.hs.eg.db 3.19.1-1 0 0.00 Genome wide annotation for Human BioArchLinuxBot 2024-05-02 18:42 (UTC)
r-org.mm.eg.db 3.19.1-1 0 0.00 Genome wide annotation for Mouse BioArchLinuxBot 2024-05-02 18:43 (UTC)
r-org.rn.eg.db 3.19.1-1 0 0.00 Genome wide annotation for Rat BioArchLinuxBot 2024-05-02 18:45 (UTC)
r-org.sc.sgd.db 3.19.1-1 0 0.00 Genome wide annotation for Yeast BioArchLinuxBot 2024-05-02 18:46 (UTC)
r-organism.dplyr 1.32.0-1 0 0.00 dplyr-based Access to Bioconductor Annotation Resources BioArchLinuxBot 2024-05-03 02:27 (UTC)
r-organismdbi 1.46.0-1 0 0.00 Software to enable the smooth interfacing of different database packages BioArchLinuxBot 2024-05-03 12:08 (UTC)
r-orgmassspecr 0.5.3-8 0 0.00 Organic Mass Spectrometry BioArchLinuxBot 2024-04-24 21:33 (UTC)
r-oriclust 1.0.2-4 0 0.00 Order-Restricted Information Criterion-Based Clustering Algorithm BioArchLinuxBot 2024-03-07 12:10 (UTC)
r-origami 1.0.7-1 0 0.00 Generalized Framework for Cross-Validation BioArchLinuxBot 2022-10-20 00:02 (UTC)
r-orqa 0.2.1-4 0 0.00 Order Restricted Assessment Of Microarray Titration Experiments BioArchLinuxBot 2022-06-06 09:44 (UTC)
r-orthogene 1.10.0-1 0 0.00 Interspecies gene mapping BioArchLinuxBot 2024-05-02 01:06 (UTC)
r-orthos 1.2.0-1 0 0.00 `orthos` is an R package for variance decomposition using conditional variational auto-encoders pekkarr 2024-05-04 01:25 (UTC)
r-orthosdata 1.2.0-1 0 0.00 Data for the orthos package pekkarr 2024-05-04 01:05 (UTC)
r-osat 1.52.0-1 0 0.00 Optimal Sample Assignment Tool BioArchLinuxBot 2024-05-02 04:15 (UTC)
r-oscope 1.34.0-1 0 0.00 Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq BioArchLinuxBot 2024-05-01 19:49 (UTC)
r-osfr 0.2.9-3 0 0.00 Interface to the 'Open Science Framework' ('OSF') BioArchLinuxBot 2022-11-26 14:38 (UTC)
r-osqp 0.6.3.2-2 0 0.00 Quadratic Programming Solver using the 'OSQP' Library BioArchLinuxBot 2024-04-25 07:23 (UTC)
r-otubase 1.54.0-1 0 0.00 Provides structure and functions for the analysis of OTU data BioArchLinuxBot 2024-05-03 01:23 (UTC)
r-outliers 0.15-9 0 0.00 Tests for Outliers BioArchLinuxBot 2024-04-24 19:59 (UTC)
r-outrider 1.22.0-1 0 0.00 OUTlier in RNA-Seq fInDER BioArchLinuxBot 2024-05-04 12:16 (UTC)
r-outsplice 1.2.0-3 0 0.00 Comparison of Splicing Events between Tumor and Normal Samples pekkarr 2024-04-28 20:28 (UTC)
r-oveseg 1.20.0-1 0 0.00 OVESEG-test to detect tissue/cell-specific markers BioArchLinuxBot 2024-05-02 19:26 (UTC)
r-paa 1.38.0-1 0 0.00 PAA (Protein Array Analyzer) BioArchLinuxBot 2024-05-02 02:41 (UTC)
r-packfinder 1.16.0-1 0 0.00 de novo Annotation of Pack-TYPE Transposable Elements BioArchLinuxBot 2024-05-02 00:25 (UTC)
r-padma 1.14.0-1 0 0.00 Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis BioArchLinuxBot 2024-05-02 22:29 (UTC)
r-padog 1.46.0-1 0 0.00 Pathway Analysis with Down-weighting of Overlapping Genes (PADOG) BioArchLinuxBot 2024-05-02 21:08 (UTC)
r-pagerank 1.14.0-1 0 0.00 Temporal and Multiplex PageRank for Gene Regulatory Network Analysis BioArchLinuxBot 2024-05-03 19:15 (UTC)
r-paintmap 1.0-9 0 0.00 Plotting Paintmaps BioArchLinuxBot 2024-03-14 18:11 (UTC)
r-pairadise 1.20.0-1 0 0.00 PAIRADISE: Paired analysis of differential isoform expression BioArchLinuxBot 2024-05-02 19:28 (UTC)
r-paircompviz 1.42.0-1 0 0.00 Multiple comparison test visualization BioArchLinuxBot 2024-05-01 18:47 (UTC)
r-paireddata 1.1.1-4 0 0.00 Paired Data Analysis BioArchLinuxBot 2022-06-06 09:51 (UTC)
r-pairedgsea 1.4.0-1 0 0.00 Paired DGE and DGS analysis for gene set enrichment analysis pekkarr 2024-05-03 14:08 (UTC)
r-pairkat 1.10.0-1 0 0.00 PaIRKAT BioArchLinuxBot 2024-05-02 19:58 (UTC)
r-pairsd3 0.1.3-2 0 0.00 D3 Scatterplot Matrices BioArchLinuxBot 2022-08-16 22:21 (UTC)
r-pak 0.7.2-1 0 0.00 Another Approach to R Package Installation peippo 2024-03-18 08:49 (UTC)
r-paletteer 1.6.0-1 0 0.00 Comprehensive Collection of Color Palettes pekkarr 2024-01-22 00:01 (UTC)
r-palmerpenguins 0.1.1-8 1 0.00 Palmer Archipelago (Antarctica) Penguin Data pekkarr 2024-04-24 18:18 (UTC)
r-palr 0.4.0-2 0 0.00 Colour Palettes for Data pekkarr 2024-04-25 14:20 (UTC)
r-pals 1.8-1 0 0.00 Color Palettes, Colormaps, and Tools to Evaluate Them BioArchLinuxBot 2023-08-23 06:23 (UTC)
r-pamr 1.56.2-1 0 0.00 Pam: Prediction Analysis for Microarrays BioArchLinuxBot 2024-04-20 12:02 (UTC)
r-pan 1.9-3 0 0.00 Multiple Imputation for Multivariate Panel or Clustered Data pekkarr 2024-04-24 20:20 (UTC)
r-pandar 1.36.0-1 0 0.00 PANDA Algorithm BioArchLinuxBot 2024-05-01 21:23 (UTC)
r-pander 0.6.5-3 0 0.00 An R 'Pandoc' Writer BioArchLinuxBot 2022-06-06 09:53 (UTC)
r-panelcn.mops 1.26.0-1 0 0.00 CNV detection tool for targeted NGS panel data BioArchLinuxBot 2024-05-02 01:56 (UTC)
r-panomir 1.8.0-1 0 0.00 Detection of miRNAs that regulate interacting groups of pathways pekkarr 2024-05-03 12:28 (UTC)
r-panp 1.74.0-1 0 0.00 Presence-Absence Calls from Negative Strand Matching Probesets BioArchLinuxBot 2024-05-01 22:41 (UTC)
r-panr 1.50.0-1 0 0.00 Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations BioArchLinuxBot 2024-05-02 18:32 (UTC)
r-panviz 1.6.0-1 0 0.00 Integrating Multi-Omic Network Data With Summay-Level GWAS Data pekkarr 2024-05-02 05:37 (UTC)
r-panvizgenerator 1.22.0-4 0 0.00 Generate PanViz visualisations from your pangenome BioArchLinuxBot 2022-07-07 06:06 (UTC)
r-paper 1.0.5-2 0 0.00 A Toolbox for Writing Pretty Papers and Reports BioArchLinuxBot 2022-08-18 01:05 (UTC)
r-paradox 0.11.1-1 0 0.00 Define and Work with Parameter Spaces for Complex Algorithms BioArchLinuxBot 2023-03-17 18:02 (UTC)
r-paralleldist 0.2.6-8 0 0.00 Parallel Distance Matrix Computation using Multiple Threads BioArchLinuxBot 2024-02-08 12:09 (UTC)
r-parallellogger 3.3.0-3 0 0.00 Support for Parallel Computation, Logging, and Function Automation BioArchLinuxBot 2023-10-26 18:24 (UTC)
r-parallelly 1.37.1-1 0 0.00 Enhancing the 'parallel' Package pekkarr 2024-03-17 13:16 (UTC)
r-parallelmap 1.5.1-4 0 0.00 Unified Interface to Parallelization Back-Ends BioArchLinuxBot 2022-06-06 09:56 (UTC)
r-parameters 0.21.6-2 0 0.00 Processing of Model Parameters BioArchLinuxBot 2024-03-18 18:11 (UTC)
r-paramhelpers 1.14.1-4 0 0.00 Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning BioArchLinuxBot 2022-11-26 12:51 (UTC)
r-parglms 1.36.0-1 0 0.00 support for parallelized estimation of GLMs/GEEs BioArchLinuxBot 2024-05-01 23:50 (UTC)
r-parmigene 1.1.0-7 0 0.00 Parallel Mutual Information Estimation for Gene Network Reconstruction BioArchLinuxBot 2024-03-08 18:07 (UTC)
r-parody 1.62.0-1 0 0.00 Parametric And Resistant Outlier DYtection BioArchLinuxBot 2024-05-02 03:36 (UTC)
r-parsedate 1.3.1-2 0 0.00 Recognize and Parse Dates in Various Formats peippo 2023-03-26 16:00 (UTC)
r-parsnip 1.2.1-2 0 0.00 A Common API to Modeling and Analysis Functions pekkarr 2024-04-27 18:03 (UTC)
r-partcnv 1.2.0-1 0 0.00 Infer locally aneuploid cells using single cell RNA-seq data pekkarr 2024-05-03 00:04 (UTC)
r-partitions 1.10.7-1 0 0.00 Additive Partitions of Integers BioArchLinuxBot 2022-07-21 12:01 (UTC)
r-party 1.3.15-1 0 0.00 A Laboratory for Recursive Partytioning BioArchLinuxBot 2024-04-29 18:19 (UTC)
r-partykit 1.2.20-1 0 0.00 A Toolkit for Recursive Partytioning BioArchLinuxBot 2023-04-14 12:03 (UTC)
r-pasilla 1.32.0-1 0 0.00 Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. BioArchLinuxBot 2024-05-03 13:45 (UTC)
r-past 1.20.0-1 0 0.00 Pathway Association Study Tool (PAST) BioArchLinuxBot 2024-05-03 01:08 (UTC)
r-pastecs 1.4.2-1 0 0.00 Package for Analysis of Space-Time Ecological Series BioArchLinuxBot 2024-02-02 00:01 (UTC)
r-patchwork 1.2.0-1 0 0.00 The Composer of Plots BioArchLinuxBot 2024-01-08 18:03 (UTC)
r-path2ppi 1.34.0-1 0 0.00 Prediction of pathway-related protein-protein interaction networks BioArchLinuxBot 2024-05-01 21:27 (UTC)
r-pathifier 1.42.0-1 0 0.00 Quantify deregulation of pathways in cancer BioArchLinuxBot 2024-05-01 18:55 (UTC)
r-pathnet 1.44.0-1 0 0.00 An R package for pathway analysis using topological information BioArchLinuxBot 2024-05-02 03:59 (UTC)
r-pathostat 1.30.0-1 0 0.00 PathoStat Statistical Microbiome Analysis Package BioArchLinuxBot 2024-05-02 22:10 (UTC)
r-pathrender 1.72.0-1 0 0.00 Render molecular pathways BioArchLinuxBot 2024-05-02 01:29 (UTC)
r-pathvar 1.30.0-2 0 0.00 Methods to Find Pathways with Significantly Different Variability BioArchLinuxBot 2024-02-11 12:05 (UTC)
r-pathview 1.44.0-1 0 0.00 a tool set for pathway based data integration and visualization BioArchLinuxBot 2024-05-02 21:00 (UTC)
r-pathwaypca 1.20.0-1 0 0.00 Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection BioArchLinuxBot 2024-05-02 04:39 (UTC)
r-paws.common 0.7.2-1 0 0.00 Paws Low-Level Amazon Web Services API pekkarr 2024-04-09 18:04 (UTC)
r-paws.storage 0.5.0-1 0 0.00 'Amazon Web Services' Storage Services pekkarr 2024-01-10 06:04 (UTC)
r-paxtoolsr 1.36.0-1 0 0.00 Access Pathways from Multiple Databases Through BioPAX and Pathway Commons BioArchLinuxBot 2023-10-26 00:00 (UTC)
r-pbapply 1.7.2-3 0 0.00 Adding Progress Bar to '*apply' Functions BioArchLinuxBot 2024-04-24 18:58 (UTC)
r-pbdmpi 0.5.1-2 0 0.00 R Interface to MPI for HPC Clusters (Programming with Big Data Project) pekkarr 2024-04-25 01:21 (UTC)
r-pbdzmq 0.3.10-1 0 0.00 Programming with Big Data – Interface to 'ZeroMQ' portaloffreedom 2023-12-18 16:07 (UTC)
r-pbivnorm 0.6.0-12 0 0.00 Vectorized Bivariate Normal CDF BioArchLinuxBot 2024-03-08 18:04 (UTC)
r-pbkrtest 0.5.2-3 1 0.00 Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models BioArchLinuxBot 2023-02-09 18:29 (UTC)
r-pbmcapply 1.5.1-5 0 0.00 Tracking the Progress of Mc*pply with Progress Bar BioArchLinuxBot 2024-04-24 21:16 (UTC)
r-pcaexplorer 2.30.0-1 0 0.00 Interactive Visualization of RNA-seq Data Using a Principal Components Approach BioArchLinuxBot 2024-05-03 14:35 (UTC)
r-pcal1 1.5.7-3 0 0.00 L1-Norm PCA Methods pekkarr 2024-04-24 19:32 (UTC)
r-pcalg 2.7.11-1 0 0.00 Methods for Graphical Models and Causal Inference BioArchLinuxBot 2024-02-12 18:10 (UTC)
r-pcamethods 1.96.0-1 0 0.00 A collection of PCA methods BioArchLinuxBot 2024-05-01 18:22 (UTC)
r-pcan 1.32.0-1 0 0.00 Phenotype Consensus ANalysis (PCAN) BioArchLinuxBot 2024-05-01 19:48 (UTC)
r-pcapp 2.0.4-2 0 0.00 Robust PCA by Projection Pursuit BioArchLinuxBot 2024-04-07 18:02 (UTC)
r-pcatools 2.16.0-1 0 0.00 PCAtools: Everything Principal Components Analysis BioArchLinuxBot 2024-05-02 13:24 (UTC)
r-pcict 0.5.4.4-1 0 0.00 Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars pekkarr 2024-02-12 17:44 (UTC)
r-pcxn 2.26.0-1 0 0.00 Exploring, analyzing and visualizing functions utilizing the pcxnData package BioArchLinuxBot 2024-05-01 19:04 (UTC)
r-pcxndata 2.25.0-1 0 0.00 Correlation coefficients and p values between pre-defined pathway/gene sets BioArchLinuxBot 2024-05-02 04:23 (UTC)
r-pd.mapping50k.xba240 3.12.0-3 0 0.00 Platform Design Info for Affymetrix Mapping50K_Xba240 BioArchLinuxBot 2022-06-06 10:11 (UTC)
r-pdatk 1.12.0-1 0 0.00 Pancreatic Ductal Adenocarcinoma Tool-Kit BioArchLinuxBot 2024-05-03 00:41 (UTC)
r-pdfcluster 1.0.4-3 0 0.00 Cluster Analysis via Nonparametric Density Estimation pekkarr 2024-04-25 14:17 (UTC)
r-pdftools 3.4.0-3 0 0.00 Text Extraction, Rendering and Converting of PDF Documents BioArchLinuxBot 2024-04-25 10:11 (UTC)
r-pdinfobuilder 1.68.0-1 0 0.00 Platform Design Information Package Builder BioArchLinuxBot 2024-05-03 00:26 (UTC)
r-pdist 1.2.1-7 0 0.00 Partitioned Distance Function BioArchLinuxBot 2024-04-24 19:45 (UTC)
r-peacoqc 1.14.0-1 0 0.00 Peak-based selection of high quality cytometry data BioArchLinuxBot 2024-05-02 13:20 (UTC)
r-peakpanther 1.16.1-1 0 0.00 Peak Picking and Annotation of High Resolution Experiments BioArchLinuxBot 2024-02-29 00:06 (UTC)
r-peca 1.40.0-1 0 0.00 Probe-level Expression Change Averaging BioArchLinuxBot 2024-05-02 02:11 (UTC)
r-peco 1.16.0-1 0 0.00 A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data BioArchLinuxBot 2024-05-03 01:51 (UTC)
r-pema 0.1.3-5 0 0.00 Penalized Meta-Analysis BioArchLinuxBot 2024-02-08 13:47 (UTC)
r-penalized 0.9.52-1 0 0.00 L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model BioArchLinuxBot 2022-06-06 10:13 (UTC)
r-pengls 1.10.0-1 0 0.00 Fit Penalised Generalised Least Squares models BioArchLinuxBot 2024-05-01 19:50 (UTC)
r-pepsnmr 1.22.0-1 0 0.00 Pre-process 1H-NMR FID signals BioArchLinuxBot 2024-05-01 20:25 (UTC)
r-pepstat 1.38.0-1 0 0.00 Statistical analysis of peptide microarrays BioArchLinuxBot 2024-05-01 22:18 (UTC)
r-peptides 2.4.6-1 0 0.00 Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences BioArchLinuxBot 2023-12-14 00:13 (UTC)
r-pepxmltab 1.38.0-1 0 0.00 Parsing pepXML files and filter based on peptide FDR BioArchLinuxBot 2024-05-02 04:34 (UTC)
r-perfect 1.16.0-1 0 0.00 Permutation filtration for microbiome data BioArchLinuxBot 2024-04-13 18:10 (UTC)
r-performance 0.11.0-1 0 0.00 Assessment of Regression Models Performance BioArchLinuxBot 2024-03-23 12:13 (UTC)
r-performanceanalytics 2.0.4-4 0 0.00 Econometric Tools for Performance and Risk Analysis BioArchLinuxBot 2022-06-06 10:16 (UTC)
r-periodicdna 1.14.0-1 0 0.00 Set of tools to identify periodic occurrences of k-mers in DNA sequences BioArchLinuxBot 2024-05-03 03:08 (UTC)
r-permute 0.9.7-13 0 0.00 Functions for Generating Restricted Permutations of Data BioArchLinuxBot 2024-04-24 19:21 (UTC)
r-pfam.db 3.19.1-1 0 0.00 A set of protein ID mappings for PFAM BioArchLinuxBot 2024-05-03 18:09 (UTC)
r-pfamanalyzer 1.4.0-1 0 0.00 Identification of domain isotypes in pfam data pekkarr 2024-05-02 04:52 (UTC)
r-pfp 1.7.0-2 0 0.00 Pathway Fingerprint Framework in R BioArchLinuxBot 2024-02-13 18:06 (UTC)
r-pgca 1.28.0-1 0 0.00 An Algorithm to Link Protein Groups Created from MS/MS Data BioArchLinuxBot 2024-05-02 04:07 (UTC)
r-phangorn 2.11.1-3 0 0.00 Phylogenetic Reconstruction and Analysis BioArchLinuxBot 2023-02-09 18:07 (UTC)
r-phantasus 1.22.2-1 0 0.00 Visual and interactive gene expression analysis BioArchLinuxBot 2023-11-18 00:28 (UTC)
r-phantasuslite 1.0.0-3 0 0.00 Loading and annotation RNA-Seq counts matrices pekkarr 2024-04-27 02:21 (UTC)
r-pharmacogx 3.8.0-1 0 0.00 Analysis of Large-Scale Pharmacogenomic Data BioArchLinuxBot 2024-05-03 00:40 (UTC)
r-phastcons100way.ucsc.hg19 3.7.2-3 0 0.00 UCSC phastCons conservation scores for hg19 BioArchLinuxBot 2022-06-06 10:20 (UTC)
r-phastcons100way.ucsc.hg38 3.7.1-3 0 0.00 UCSC phastCons conservation scores for hg38 BioArchLinuxBot 2022-06-06 10:21 (UTC)
r-phater 1.0.7-3 0 0.00 PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding BioArchLinuxBot 2022-06-06 10:21 (UTC)
r-pheatmap 1.0.12-4 0 0.00 Pretty Heatmaps BioArchLinuxBot 2022-06-06 10:21 (UTC)
r-phemd 1.18.0-2 0 0.00 Phenotypic EMD for comparison of single-cell samples BioArchLinuxBot 2024-04-28 18:00 (UTC)
r-phenogeneranker 1.12.0-1 0 0.00 PhenoGeneRanker: A gene and phenotype prioritization tool BioArchLinuxBot 2024-05-01 23:41 (UTC)
r-phenomis 1.6.0-1 0 0.00 Postprocessing and univariate analysis of omics data pekkarr 2024-05-03 00:35 (UTC)
r-phenopath 1.28.0-1 0 0.00 Genomic trajectories with heterogeneous genetic and environmental backgrounds BioArchLinuxBot 2024-05-02 19:44 (UTC)
r-phenotest 1.52.0-1 0 0.00 Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. BioArchLinuxBot 2024-05-03 13:09 (UTC)
r-phenstat 2.40.0-1 0 0.00 Statistical analysis of phenotypic data BioArchLinuxBot 2024-05-01 20:40 (UTC)
r-philentropy 0.8.0-1 0 0.00 Similarity and Distance Quantification Between Probability Functions BioArchLinuxBot 2023-12-02 18:03 (UTC)
r-philr 1.30.0-1 0 0.00 Phylogenetic partitioning based ILR transform for metagenomics data BioArchLinuxBot 2024-05-02 01:08 (UTC)
r-phipdata 1.12.0-1 0 0.00 Container for PhIP-Seq Experiments BioArchLinuxBot 2024-05-02 20:10 (UTC)
r-phosphonormalizer 1.28.0-1 0 0.00 Compensates for the bias introduced by median normalization in BioArchLinuxBot 2024-05-01 19:10 (UTC)
r-phosphoricons 0.2.1-1 0 0.00 'Phosphor' Icons for R BioArchLinuxBot 2024-04-08 12:01 (UTC)
r-phosr 1.14.0-1 0 0.00 A set of methods and tools for comprehensive analysis of phosphoproteomics data BioArchLinuxBot 2024-05-02 19:08 (UTC)
r-phyclust 0.1.34-1 0 0.00 Phylogenetic Clustering (Phyloclustering) BioArchLinuxBot 2023-09-06 06:07 (UTC)
r-phylobase 0.8.12-1 0 0.00 Base Package for Phylogenetic Structures and Comparative Data BioArchLinuxBot 2024-01-30 06:23 (UTC)
r-phylogram 2.1.0-4 0 0.00 Dendrograms for Evolutionary Analysis BioArchLinuxBot 2022-06-06 10:27 (UTC)
r-phylolm 2.6.2-1 0 0.00 Phylogenetic Linear Regression BioArchLinuxBot 2022-06-06 10:28 (UTC)
r-phyloprofile 1.16.5-1 0 0.00 PhyloProfile BioArchLinuxBot 2024-04-18 00:05 (UTC)
r-phyloseq 1.48.0-1 0 0.00 Handling and analysis of high-throughput microbiome census data BioArchLinuxBot 2024-05-02 00:01 (UTC)
r-phytools 2.1.1-2 0 0.00 Phylogenetic Tools for Comparative Biology (and Other Things) pekkarr 2024-04-25 14:29 (UTC)
r-pi 2.14.0-2 0 0.00 Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level BioArchLinuxBot 2024-04-15 18:30 (UTC)
r-piano 2.20.0-1 0 0.00 Platform for integrative analysis of omics data BioArchLinuxBot 2024-05-02 02:19 (UTC)
r-picante 1.8.2-4 0 0.00 Integrating Phylogenies and Ecology BioArchLinuxBot 2022-06-06 10:30 (UTC)
r-pickgene 1.76.0-1 0 0.00 Adaptive Gene Picking for Microarray Expression Data Analysis BioArchLinuxBot 2024-05-02 04:10 (UTC)
r-pics 2.48.0-1 0 0.00 Probabilistic inference of ChIP-seq BioArchLinuxBot 2024-05-02 23:38 (UTC)
r-pigengene 1.30.0-1 0 0.00 Infers biological signatures from gene expression data BioArchLinuxBot 2024-05-03 04:14 (UTC)
r-pillar 1.9.0-1 2 0.00 Coloured Formatting for Columns greyltc 2023-03-26 17:39 (UTC)
r-pinfsc50 1.3.0-2 0 0.00 Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' BioArchLinuxBot 2024-03-16 18:08 (UTC)
r-ping 2.48.0-1 0 0.00 Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data BioArchLinuxBot 2024-05-03 06:04 (UTC)
r-pingr 2.0.3-2 0 0.00 Check if a Remote Computer is Up pekkarr 2024-04-25 07:43 (UTC)
r-pipecomp 1.14.0-1 0 0.00 pipeComp pipeline benchmarking framework BioArchLinuxBot 2024-05-03 01:46 (UTC)
r-pipeframe 1.20.0-1 0 0.00 Pipeline framework for bioinformatics in R BioArchLinuxBot 2024-05-03 03:09 (UTC)
r-pixmap 0.4.13-1 0 0.00 Bitmap Images / Pixel Maps BioArchLinuxBot 2024-05-03 18:20 (UTC)
r-pkgbuild 1.4.4-1 2 0.00 Find Tools Needed to Build R Packages greyltc 2024-03-18 08:25 (UTC)
r-pkgcache 2.2.2-1 0 0.00 Cache ‘CRAN’-Like Metadata and R Packages peippo 2024-04-09 12:10 (UTC)
r-pkgconfig 2.0.3-14 2 0.00 Private Configuration for 'R' Packages BioArchLinuxBot 2024-04-24 18:04 (UTC)
r-pkgdepends 0.7.1-1 0 0.00 Cache ‘CRAN’-Like Metadata and R Packages peippo 2023-12-11 12:39 (UTC)
r-pkgdeptools 1.63.0-3 0 0.00 Package Dependency Tools BioArchLinuxBot 2023-11-05 18:01 (UTC)
r-pkgdown 2.0.9-1 0 0.00 Make Static HTML Documentation for a Package BioArchLinuxBot 2024-04-19 01:05 (UTC)
r-pkgkitten 0.2.3-1 0 0.00 Create Simple Packages Which Do not Upset R Package Checks pekkarr 2024-03-20 18:02 (UTC)
r-pkgload 1.3.4-1 3 0.00 Simulate Package Installation and Attach greyltc 2024-01-17 07:28 (UTC)
r-pkgmaker 0.32.10-1 0 0.00 Development Utilities for R Packages BioArchLinuxBot 2023-05-03 12:02 (UTC)
r-pkgsearch 3.1.3-1 0 0.00 Search and Query CRAN R Packages peippo 2023-12-11 12:34 (UTC)
r-planet 1.12.0-1 0 0.00 Placental DNA methylation analysis tools BioArchLinuxBot 2024-05-01 20:06 (UTC)
r-plasmut 1.2.0-1 0 0.00 Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic pekkarr 2024-05-02 04:52 (UTC)
r-plethy 1.36.0-3 0 0.00 R framework for exploration and analysis of respirometry data BioArchLinuxBot 2024-02-12 12:06 (UTC)
r-plgem 1.76.0-1 0 0.00 Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM) BioArchLinuxBot 2024-05-02 12:24 (UTC)
r-plier 1.74.0-1 0 0.00 Implements the Affymetrix PLIER algorithm BioArchLinuxBot 2024-05-01 22:39 (UTC)
r-plm 2.6.4-1 0 0.00 Linear Models for Panel Data pekkarr 2024-04-02 00:03 (UTC)
r-plogo2 1.14.0-1 0 0.00 Plot Gene Ontology and KEGG pathway Annotation and Abundance BioArchLinuxBot 2023-10-26 06:03 (UTC)
r-plogr 0.2.0-12 0 0.00 The 'plog' C++ Logging Library pekkarr 2024-04-24 18:18 (UTC)
r-plot3d 1.4.1-2 0 0.00 Plotting Multi-Dimensional Data BioArchLinuxBot 2024-04-14 12:19 (UTC)
r-plot3drgl 1.0.4-2 0 0.00 Plotting Multi-Dimensional Data - Using 'rgl' pekkarr 2024-04-25 22:38 (UTC)
r-plotgardener 1.10.0-1 0 0.00 Coordinate-Based Genomic Visualization Package for R BioArchLinuxBot 2024-05-03 03:31 (UTC)
r-plotgrouper 1.22.0-1 0 0.00 Shiny app GUI wrapper for ggplot with built-in statistical analysis BioArchLinuxBot 2024-05-01 21:40 (UTC)
r-plotly 4.10.4-1 0 0.00 Create Interactive Web Graphics via 'plotly.js' BioArchLinuxBot 2024-01-14 00:03 (UTC)
r-plotmo 3.6.3-2 0 0.00 Plot a Model's Residuals, Response, and Partial Dependence Plots BioArchLinuxBot 2024-04-12 12:08 (UTC)
r-plotrix 3.8.4-3 1 0.00 Various Plotting Functions BioArchLinuxBot 2024-04-24 19:10 (UTC)
r-plotroc 2.3.1-1 0 0.00 Generate Useful ROC Curve Charts for Print and Interactive Use BioArchLinuxBot 2023-10-06 18:05 (UTC)
r-plottools 0.3.0-2 0 0.00 Add Continuous Legends to Plots BioArchLinuxBot 2024-03-16 18:03 (UTC)
r-plpe 1.64.0-1 0 0.00 Local Pooled Error Test for Differential Expression with Paired High-throughput Data BioArchLinuxBot 2024-05-02 12:34 (UTC)
r-pls 2.8.3-3 0 0.00 Partial Least Squares and Principal Component Regression BioArchLinuxBot 2024-04-24 19:38 (UTC)
r-plsgenomics 1.5.3-1 0 0.00 PLS Analyses for Genomics BioArchLinuxBot 2024-03-28 12:02 (UTC)
r-plsvarsel 0.9.11-1 0 0.00 Variable Selection in Partial Least Squares BioArchLinuxBot 2024-04-23 00:05 (UTC)
r-plyinteractions 1.2.0-1 0 0.00 Extending tidy verbs to genomic interactions pekkarr 2024-05-03 03:35 (UTC)
r-plyr 1.8.9-3 1 0.00 Tools for Splitting, Applying and Combining Data pekkarr 2024-04-25 07:05 (UTC)
r-plyranges 1.24.0-1 0 0.00 A fluent interface for manipulating GenomicRanges BioArchLinuxBot 2024-05-03 00:53 (UTC)
r-pma 1.2.3-2 0 0.00 Penalized Multivariate Analysis BioArchLinuxBot 2024-03-11 18:11 (UTC)
r-pmcmr 4.4-4 0 0.00 Calculate Pairwise Multiple Comparisons of Mean Rank Sums pekkarr 2024-04-24 23:26 (UTC)
r-pmcmrplus 1.9.10-1 0 0.00 Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended BioArchLinuxBot 2023-12-10 18:02 (UTC)
r-pmm 1.36.0-1 0 0.00 Parallel Mixed Model BioArchLinuxBot 2024-05-01 19:43 (UTC)
r-pmp 1.16.0-1 0 0.00 Peak Matrix Processing and signal batch correction for metabolomics datasets BioArchLinuxBot 2024-05-02 19:14 (UTC)
r-png 0.1.8-1 0 0.00 Read and write PNG images greyltc 2022-11-30 09:27 (UTC)
r-podcall 1.12.0-1 0 0.00 Positive Droplet Calling for DNA Methylation Droplet Digital PCR BioArchLinuxBot 2024-05-01 21:04 (UTC)
r-podkat 1.36.0-1 0 0.00 Position-Dependent Kernel Association Test BioArchLinuxBot 2024-05-03 03:03 (UTC)
r-pogos 1.24.0-1 0 0.00 PharmacOGenomics Ontology Support BioArchLinuxBot 2024-05-03 18:44 (UTC)
r-poibin 1.5-8 0 0.00 The Poisson Binomial Distribution BioArchLinuxBot 2024-04-24 20:38 (UTC)
r-poiclaclu 1.0.2.1-10 0 0.00 Classification and Clustering of Sequencing Data Based on a Poisson Model BioArchLinuxBot 2024-04-24 20:41 (UTC)
r-poilog 0.4.2-3 0 0.00 Poisson Lognormal and Bivariate Poisson Lognormal Distribution BioArchLinuxBot 2024-03-16 12:07 (UTC)
r-poissonbinomial 1.2.6-1 0 0.00 Efficient Computation of Ordinary and Generalized Poisson Binomial Distributions BioArchLinuxBot 2023-11-29 18:08 (UTC)
r-polca 1.6.0.1-3 0 0.00 Polytomous Variable Latent Class Analysis pekkarr 2024-04-25 00:47 (UTC)
r-polspline 1.1.24-2 0 0.00 Polynomial Spline Routines BioArchLinuxBot 2024-03-15 12:01 (UTC)
r-polychrome 1.5.1-4 0 0.00 Qualitative Palettes with Many Colors BioArchLinuxBot 2024-04-12 12:12 (UTC)
r-polyclip 1.10.6-1 1 0.00 Polygon Clipping BioArchLinuxBot 2023-09-27 12:03 (UTC)
r-polycor 0.8.1-6 0 0.00 Polychoric and Polyserial Correlations BioArchLinuxBot 2024-04-08 18:12 (UTC)
r-polyester 1.39.0-1 0 0.00 Simulate RNA-seq reads BioArchLinuxBot 2024-05-02 00:19 (UTC)
r-polylabelr 0.2.0-4 0 0.00 Find the Pole of Inaccessibility (Visual Center) of a Polygon BioArchLinuxBot 2022-06-06 10:46 (UTC)
r-polynom 1.4.1-11 1 0.00 A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations BioArchLinuxBot 2024-03-01 06:02 (UTC)
r-polynomf 2.0.8-1 0 0.00 Polynomials in R BioArchLinuxBot 2024-03-03 06:01 (UTC)
r-polyphen.hsapiens.dbsnp131 1.0.2-3 0 0.00 PolyPhen Predictions for Homo sapiens dbSNP build 131 BioArchLinuxBot 2022-06-06 10:47 (UTC)
r-poma 1.12.0-1 0 0.00 User-friendly Workflow for Metabolomics and Proteomics Data Analysis BioArchLinuxBot 2023-10-28 14:43 (UTC)
r-poorman 0.2.7-2 0 0.00 A Poor Man's Dependency Free Recreation of 'dplyr' BioArchLinuxBot 2024-03-14 18:04 (UTC)
r-posterior 1.5.0-1 0 0.00 Tools for Working with Posterior Distributions BioArchLinuxBot 2023-10-31 12:48 (UTC)
r-potra 1.13.0-4 0 0.00 PoTRA: Pathways of Topological Rank Analysis BioArchLinuxBot 2023-04-29 05:10 (UTC)

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