r-metabosignal
|
1.34.0-1 |
0 |
0.00
|
MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways |
BioArchLinuxBot
|
2024-05-04 18:28 (UTC) |
r-omnipathr
|
3.11.10-1 |
0 |
0.00
|
OmniPath web service client and more |
BioArchLinuxBot
|
2024-05-04 12:14 (UTC) |
r-keggandmetacoredzpathwaysgeo
|
1.24.0-1 |
0 |
0.00
|
Disease Datasets from GEO |
BioArchLinuxBot
|
2024-05-04 00:49 (UTC) |
r-keggdzpathwaysgeo
|
1.42.0-1 |
0 |
0.00
|
KEGG Disease Datasets from GEO |
BioArchLinuxBot
|
2024-05-04 00:43 (UTC) |
r-seq2pathway.data
|
1.36.0-1 |
0 |
0.00
|
data set for R package seq2pathway |
BioArchLinuxBot
|
2024-05-04 00:14 (UTC) |
r-iseepathways
|
1.2.0-1 |
0 |
0.00
|
iSEE extension for panels related to pathway analysis |
pekkarr
|
2024-05-03 18:48 (UTC) |
r-tbsignatureprofiler
|
1.16.0-1 |
0 |
0.00
|
Profile RNA-Seq Data Using TB Pathway Signatures |
BioArchLinuxBot
|
2024-05-03 18:37 (UTC) |
r-oppar
|
1.32.0-1 |
0 |
0.00
|
Outlier profile and pathway analysis in R |
BioArchLinuxBot
|
2024-05-03 18:34 (UTC) |
r-progeny
|
1.26.0-1 |
0 |
0.00
|
Pathway RespOnsive GENes for activity inference from gene expression |
BioArchLinuxBot
|
2024-05-03 18:22 (UTC) |
r-clipper
|
1.44.0-1 |
0 |
0.00
|
Gene Set Analysis Exploiting Pathway Topology |
BioArchLinuxBot
|
2024-05-03 13:13 (UTC) |
r-panomir
|
1.8.0-1 |
0 |
0.00
|
Detection of miRNAs that regulate interacting groups of pathways |
pekkarr
|
2024-05-03 12:28 (UTC) |
r-sspaths
|
1.18.0-1 |
0 |
0.00
|
ssPATHS: Single Sample PATHway Score |
BioArchLinuxBot
|
2024-05-03 07:58 (UTC) |
r-spia
|
2.56.0-1 |
0 |
0.00
|
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations |
BioArchLinuxBot
|
2024-05-03 07:02 (UTC) |
r-metaphor
|
1.6.0-1 |
0 |
0.00
|
Metabolic Pathway Analysis of RNA |
pekkarr
|
2024-05-03 04:11 (UTC) |
r-reactomepa
|
1.48.0-1 |
0 |
0.00
|
Reactome Pathway Analysis |
BioArchLinuxBot
|
2024-05-03 02:21 (UTC) |
r-past
|
1.20.0-1 |
0 |
0.00
|
Pathway Association Study Tool (PAST) |
BioArchLinuxBot
|
2024-05-03 01:08 (UTC) |
r-sbgnview
|
1.18.0-1 |
0 |
0.00
|
"SBGNview: Data Analysis, Integration and Visualization on SBGN Pathways" |
BioArchLinuxBot
|
2024-05-02 23:34 (UTC) |
r-seq2pathway
|
1.36.0-1 |
0 |
0.00
|
a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data |
BioArchLinuxBot
|
2024-05-02 23:16 (UTC) |
r-pwomics
|
1.36.0-1 |
0 |
0.00
|
Pathway-based data integration of omics data |
BioArchLinuxBot
|
2024-05-02 23:13 (UTC) |
r-chronos
|
1.32.0-1 |
0 |
0.00
|
CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis |
BioArchLinuxBot
|
2024-05-02 23:09 (UTC) |
r-hipathia
|
3.4.0-1 |
0 |
0.00
|
HiPathia: High-throughput Pathway Analysis |
BioArchLinuxBot
|
2024-05-02 22:31 (UTC) |
r-padma
|
1.14.0-1 |
0 |
0.00
|
Individualized Multi-Omic Pathway Deviation Scores Using Multiple Factor Analysis |
BioArchLinuxBot
|
2024-05-02 22:29 (UTC) |
r-desubs
|
1.30.0-1 |
0 |
0.00
|
DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments |
BioArchLinuxBot
|
2024-05-02 22:13 (UTC) |
r-pathostat
|
1.30.0-1 |
0 |
0.00
|
PathoStat Statistical Microbiome Analysis Package |
BioArchLinuxBot
|
2024-05-02 22:10 (UTC) |
r-sipsic
|
1.4.0-1 |
0 |
0.00
|
Calculate Pathway Scores for Each Cell in scRNA-Seq Data |
pekkarr
|
2024-05-02 21:50 (UTC) |
r-padog
|
1.46.0-1 |
0 |
0.00
|
Pathway Analysis with Down-weighting of Overlapping Genes (PADOG) |
BioArchLinuxBot
|
2024-05-02 21:08 (UTC) |
r-kegglincs
|
1.30.0-1 |
0 |
0.00
|
Visualize all edges within a KEGG pathway and overlay LINCS data |
BioArchLinuxBot
|
2024-05-02 21:07 (UTC) |
r-ggkegg
|
1.2.0-1 |
0 |
0.00
|
KEGG pathway visualization by ggplot2 |
pekkarr
|
2024-05-02 21:04 (UTC) |
r-dce
|
1.12.0-1 |
0 |
0.00
|
Pathway Enrichment Based on Differential Causal Effects |
BioArchLinuxBot
|
2024-05-02 21:03 (UTC) |
r-pathview
|
1.44.0-1 |
0 |
0.00
|
a tool set for pathway based data integration and visualization |
BioArchLinuxBot
|
2024-05-02 21:00 (UTC) |
r-mirintegrator
|
1.34.0-1 |
0 |
0.00
|
Integrating microRNA expression into signaling pathways for pathway analysis |
BioArchLinuxBot
|
2024-05-02 20:59 (UTC) |
r-ssnappy
|
1.8.0-1 |
0 |
0.00
|
Single Sample directioNAl Pathway Perturbation analYsis |
pekkarr
|
2024-05-02 20:58 (UTC) |
r-gage
|
2.54.0-1 |
0 |
0.00
|
Generally Applicable Gene-set Enrichment for Pathway Analysis |
BioArchLinuxBot
|
2024-05-02 20:47 (UTC) |
r-phenopath
|
1.28.0-1 |
0 |
0.00
|
Genomic trajectories with heterogeneous genetic and environmental backgrounds |
BioArchLinuxBot
|
2024-05-02 19:44 (UTC) |
r-sigsquared
|
1.36.0-1 |
0 |
0.00
|
Gene signature generation for functionally validated signaling pathways |
BioArchLinuxBot
|
2024-05-02 12:37 (UTC) |
r-ncigraph
|
1.52.0-1 |
0 |
0.00
|
Pathways from the NCI Pathways Database |
BioArchLinuxBot
|
2024-05-02 05:52 (UTC) |
r-biocartaimage
|
1.2.0-1 |
0 |
0.00
|
BioCarta Pathway Images |
pekkarr
|
2024-05-02 04:47 (UTC) |
r-pathwaypca
|
1.20.0-1 |
0 |
0.00
|
Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection |
BioArchLinuxBot
|
2024-05-02 04:39 (UTC) |
r-pcxndata
|
2.25.0-1 |
0 |
0.00
|
Correlation coefficients and p values between pre-defined pathway/gene sets |
BioArchLinuxBot
|
2024-05-02 04:23 (UTC) |
r-mirnapath
|
1.64.0-1 |
0 |
0.00
|
Pathway Enrichment for miRNA Expression Data |
BioArchLinuxBot
|
2024-05-02 04:00 (UTC) |
r-pathnet
|
1.44.0-1 |
0 |
0.00
|
An R package for pathway analysis using topological information |
BioArchLinuxBot
|
2024-05-02 03:59 (UTC) |
r-props
|
1.26.0-1 |
0 |
0.00
|
PRObabilistic Pathway Score (PROPS) |
BioArchLinuxBot
|
2024-05-02 02:46 (UTC) |
r-gep2pep
|
1.24.0-1 |
0 |
0.00
|
Creation and Analysis of Pathway Expression Profiles (PEPs) |
BioArchLinuxBot
|
2024-05-02 02:33 (UTC) |
r-multigsea
|
1.14.0-1 |
0 |
0.00
|
Combining GSEA-based pathway enrichment with multi omics data integration |
BioArchLinuxBot
|
2024-05-02 02:24 (UTC) |
r-metapone
|
1.10.0-1 |
0 |
0.00
|
Conducts pathway test of metabolomics data using a weighted permutation test |
BioArchLinuxBot
|
2024-05-02 02:21 (UTC) |
r-graphite
|
1.50.0-1 |
0 |
0.00
|
GRAPH Interaction from pathway Topological Environment |
BioArchLinuxBot
|
2024-05-02 01:31 (UTC) |
r-pathrender
|
1.72.0-1 |
0 |
0.00
|
Render molecular pathways |
BioArchLinuxBot
|
2024-05-02 01:29 (UTC) |
r-sitepath
|
1.20.0-1 |
0 |
0.00
|
Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations |
BioArchLinuxBot
|
2024-05-02 01:07 (UTC) |
r-hpip
|
1.10.0-1 |
0 |
0.00
|
Host-Pathogen Interaction Prediction |
BioArchLinuxBot
|
2024-05-01 23:34 (UTC) |
r-gmrp
|
1.32.0-1 |
0 |
0.00
|
GWAS-based Mendelian Randomization and Path Analyses |
BioArchLinuxBot
|
2024-05-01 22:28 (UTC) |