25 packages found. Page 1 of 1.

Name Version Votes Popularity? Description Maintainer Last Updated
andi 0.14-1 0 0.00 Rapid estimation of evolutionary distances kloetzl 2021-11-28 13:53 (UTC)
diamond-aligner-git 0.9.27.r1.g58ee82e-1 0 0.00 Accelerated BLAST compatible local sequence aligner orphan 2019-11-04 12:32 (UTC)
mash 2.3-1 0 0.00 Fast genome and metagenome distance estimation using MinHash kloetzl 2021-03-11 17:08 (UTC)
mmseqs2-search-bin 1.7.0-3 0 0.00 MMseqs2 app to run on your workstation or servers zxp19821005 2024-05-31 04:55 (UTC)
phylonium 1.7-1 0 0.00 Fast and Accurate Estimation of Evolutionary Distances kloetzl 2024-04-18 18:09 (UTC)
python-crimson 1.0.0-1 0 0.00 Bioinformatics tool outputs converter to JSON or YAML orphan 2021-10-25 07:33 (UTC)
python-gemmi 0.6.6-1 0 0.00 macromolecular crystallography library (Python bindings) exyi 2024-05-29 10:24 (UTC)
salmon 1.10.3-1 0 0.00 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments kbipinkumar 2024-03-16 00:06 (UTC)
sniffles 1.0.12-1 0 0.00 Structural variation caller using third generation sequencing orphan 2021-12-13 23:16 (UTC)
stringtie 2.2.3-1 0 0.00 A fast and highly efficient assembler of RNA-Seq alignments into potential transcripts malacology 2024-05-08 06:01 (UTC)
trimal 1.4.1-1 0 0.00 A tool for automated alignment trimming in large-scale phylogenetic analyses exyi 2023-11-17 17:33 (UTC)
abyss 2.3.7-2 1 0.00 Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler malacology 2023-06-02 00:37 (UTC)
geneabacus 0.2.2-1 1 0.00 Gene counter and profiler. vejnar 2023-03-14 17:38 (UTC)
genometools 1.6.2-1 1 0.00 A unified set of bioinformatics tools for analyzing genomes harrietobrien 2022-07-13 11:28 (UTC)
hhsuite 3.2.0-1 1 0.00 A set of programs for protein sequence homology detection by iterative HMM-HMM comparison for computational biology like PSI-BLAST semi 2019-05-19 04:16 (UTC)
python-fontools 0.6.1-1 1 0.00 FONtools: The Feature Object Notation tools vejnar 2023-03-14 17:37 (UTC)
verifybamid 1.1.3-1.1 1 0.00 Verify identity and purity of sequence data orphan 2020-05-09 17:19 (UTC)
freebayes 1.3.8-2 2 0.00 About Bayesian haplotype-based genetic polymorphism discovery and genotyping BioArchLinuxBot 2024-06-04 18:05 (UTC)
igvtools 2.13.2-1 2 0.00 IGV utilities for preprocessing bioinformatics data files orphan 2022-07-13 03:37 (UTC)
artemis 18.2.0-6 3 0.00 A genome viewer and annotation tool that visualizes biological sequence features malacology 2023-05-14 12:14 (UTC)
kallisto 0.48.0-1 4 0.00 Quantify abundances of transcripts from RNA-Seq data flying-sheep 2022-01-25 09:04 (UTC)
mygnuhealth 1.0.5-1 4 0.00 The GNU Health Personal Health Record (PHR) meanmicio 2021-10-19 12:51 (UTC)
star-cshl 2.7.11b-1 6 0.00 STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays vejnar 2024-07-12 01:36 (UTC)
meme 5.5.1-1 7 0.00 The MEME suite provides tools for discovering and using protein and DNA sequence motifs orphan 2023-02-17 07:40 (UTC)
python-pysam 0.22.0-1 12 0.16 Python interface for the SAM/BAM sequence alignment and mapping format oldherl 2024-04-16 07:41 (UTC)

25 packages found. Page 1 of 1.