4569 packages found. Page 5 of 92.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-methylaid 1.38.0-1 0 0.00 Visual and interactive quality control of large Illumina DNA Methylation array data sets BioArchLinuxBot 2024-05-03 14:21 (UTC)
r-recountmethylation 1.14.0-1 0 0.00 Access and analyze DNA methylation database compilations BioArchLinuxBot 2024-05-03 14:20 (UTC)
r-flowsorted.blood.450k 1.42.0-1 0 0.00 Illumina HumanMethylation data on sorted blood cell populations BioArchLinuxBot 2024-05-03 14:17 (UTC)
r-methylumi 2.50.0-1 0 0.00 Handle Illumina methylation data BioArchLinuxBot 2024-05-03 14:11 (UTC)
r-omicrexposome 1.26.0-1 0 0.00 Exposome and omic data associatin and integration analysis BioArchLinuxBot 2024-05-03 14:09 (UTC)
r-bnbc 1.26.0-1 0 0.00 Bandwise normalization and batch correction of Hi-C data BioArchLinuxBot 2024-05-03 14:04 (UTC)
r-harmonizr 1.2.0-1 0 0.00 Handles missing values and makes more data available pekkarr 2024-05-03 14:00 (UTC)
r-demixt 1.20.0-1 0 0.00 Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms BioArchLinuxBot 2024-05-03 13:57 (UTC)
r-damirseq 2.16.0-1 0 0.00 Data Mining for RNA-seq data: normalization, feature selection and classification BioArchLinuxBot 2024-05-03 13:54 (UTC)
r-doppelgangr 1.32.0-1 0 0.00 Identify likely duplicate samples from genomic or meta-data BioArchLinuxBot 2024-05-03 13:52 (UTC)
r-crossmeta 1.30.0-1 0 0.00 Cross Platform Meta-Analysis of Microarray Data BioArchLinuxBot 2024-05-03 13:50 (UTC)
r-msprep 1.14.0-1 0 0.00 Package for Summarizing, Filtering, Imputing, and Normalizing Metabolomics Data BioArchLinuxBot 2024-05-03 13:49 (UTC)
r-pasilla 1.32.0-1 0 0.00 Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. BioArchLinuxBot 2024-05-03 13:45 (UTC)
r-spicyr 1.16.0-1 0 0.00 Spatial analysis of in situ cytometry data BioArchLinuxBot 2024-05-03 13:43 (UTC)
r-sigcheck 2.36.0-1 0 0.00 Check a gene signature's prognostic performance against random signatures, known signatures, and permuted data/metadata BioArchLinuxBot 2024-05-03 13:42 (UTC)
r-faahko 1.44.0-1 0 0.00 Saghatelian et al. (2004) FAAH knockout LC/MS data BioArchLinuxBot 2024-05-03 13:37 (UTC)
r-camera 1.60.0-1 0 0.00 Collection of annotation related methods for mass spectrometry data BioArchLinuxBot 2024-05-03 13:35 (UTC)
r-riboprofiling 1.34.0-1 0 0.00 Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation BioArchLinuxBot 2024-05-03 13:31 (UTC)
r-cafe 1.40.0-1 0 0.00 Chromosmal Aberrations Finder in Expression data BioArchLinuxBot 2024-05-03 13:22 (UTC)
r-experimenthubdata 1.30.0-1 0 0.00 Add resources to ExperimentHub BioArchLinuxBot 2024-05-03 13:17 (UTC)
r-protgear 1.8.0-1 0 0.00 Protein Micro Array Data Management and Interactive Visualization pekkarr 2024-05-03 13:06 (UTC)
r-cbaf 1.26.0-1 0 0.00 Automated functions for comparing various omic data from cbioportal.org BioArchLinuxBot 2024-05-03 13:05 (UTC)
r-nbamseq 1.20.0-1 0 0.00 Negative Binomial Additive Model for RNA-Seq Data BioArchLinuxBot 2024-05-03 13:00 (UTC)
r-countsimqc 1.22.0-1 0 0.00 Compare Characteristic Features of Count Data Sets BioArchLinuxBot 2024-05-03 12:59 (UTC)
r-mlinterfaces 1.84.0-1 0 0.00 Uniform interfaces to R machine learning procedures for data in Bioconductor containers BioArchLinuxBot 2024-05-03 12:57 (UTC)
r-zinbwave 1.26.0-1 0 0.00 Zero-Inflated Negative Binomial Model for RNA-Seq Data BioArchLinuxBot 2024-05-03 12:56 (UTC)
r-xcms 4.2.0-1 0 0.00 LC-MS and GC-MS Data Analysis BioArchLinuxBot 2024-05-03 12:55 (UTC)
r-sctgif 1.18.0-1 0 0.00 Cell type annotation for unannotated single-cell RNA-Seq data BioArchLinuxBot 2024-05-03 12:53 (UTC)
r-ggbio 1.52.0-1 0 0.00 Visualization tools for genomic data BioArchLinuxBot 2024-05-03 12:38 (UTC)
r-epivizrdata 1.32.0-1 0 0.00 Data Management API for epiviz interactive visualization app BioArchLinuxBot 2024-05-03 12:37 (UTC)
r-annotationhubdata 1.34.0-1 0 0.00 Transform public data resources into Bioconductor Data Structures BioArchLinuxBot 2024-05-03 12:36 (UTC)
r-vulcan 1.26.0-1 0 0.00 VirtUaL ChIP-Seq data Analysis using Networks BioArchLinuxBot 2024-05-03 12:35 (UTC)
r-redseq 1.50.0-1 0 0.00 Analysis of high-throughput sequencing data processed by restriction enzyme digestion BioArchLinuxBot 2024-05-03 12:31 (UTC)
r-biseq 1.44.0-1 0 0.00 Processing and analyzing bisulfite sequencing data BioArchLinuxBot 2024-05-03 12:30 (UTC)
r-methylseekr 1.44.0-1 0 0.00 Segmentation of Bis-seq data BioArchLinuxBot 2024-05-03 12:29 (UTC)
r-splinetimer 1.32.0-1 0 0.00 Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction BioArchLinuxBot 2024-05-03 12:28 (UTC)
r-msigdb 1.12.0-1 0 0.00 An ExperimentHub Package for the Molecular Signatures Database (MSigDB) BioArchLinuxBot 2024-05-03 12:27 (UTC)
r-gsvadata 1.40.0-1 0 0.00 Data employed in the vignette of the GSVA package BioArchLinuxBot 2024-05-03 12:23 (UTC)
r-slalom 1.26.0-1 0 0.00 Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data BioArchLinuxBot 2024-05-03 12:22 (UTC)
r-aucell 1.26.0-1 0 0.00 AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures) BioArchLinuxBot 2024-05-03 12:21 (UTC)
r-umi4cats 1.14.0-1 0 0.00 UMI4Cats: Processing, analysis and visualization of UMI-4C chromatin contact data BioArchLinuxBot 2024-05-03 12:15 (UTC)
r-qpgraph 2.38.0-1 0 0.00 Estimation of genetic and molecular regulatory networks from high-throughput genomics data BioArchLinuxBot 2024-05-03 12:14 (UTC)
r-mgfr 1.30.0-1 0 0.00 Marker Gene Finder in RNA-seq data BioArchLinuxBot 2024-05-03 12:09 (UTC)
r-organismdbi 1.46.0-1 0 0.00 Software to enable the smooth interfacing of different database packages BioArchLinuxBot 2024-05-03 12:08 (UTC)
r-chippeakanno 3.38.0-1 0 0.00 Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data BioArchLinuxBot 2024-05-03 12:06 (UTC)
moab-git 5.5.0.r7.g236d1249a-1 0 0.00 The Mesh-Oriented datABase MOAB is a component for representing and evaluating mesh data LukeLabrie 2024-05-03 10:58 (UTC)
python-glyphsets 1.0.0-1 0 0.00 an API with data about glyph sets for many different scripts and languages alerque 2024-05-03 09:59 (UTC)
r-cbioportaldata 2.16.0-1 0 0.00 Exposes and makes available data from the cBioPortal web resources BioArchLinuxBot 2024-05-03 09:35 (UTC)
r-chipqc 1.40.0-1 0 0.00 Quality metrics for ChIPseq data BioArchLinuxBot 2024-05-03 09:33 (UTC)
r-imcrtools 1.10.0-1 0 0.00 Methods for imaging mass cytometry data analysis BioArchLinuxBot 2024-05-03 09:29 (UTC)

4569 packages found. Page 5 of 92.

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