|
r-tadar
|
1.2.0-1 |
0 |
0.00
|
Transcriptome Analysis of Differential Allelic Representation |
pekkarr
|
2024-05-03 06:01 (UTC) |
|
r-synmut
|
1.20.0-1 |
0 |
0.00
|
SynMut: Designing Synonymously Mutated Sequences with Different Genomic Signatures |
BioArchLinuxBot
|
2024-05-03 07:31 (UTC) |
|
r-switchde
|
1.30.0-1 |
0 |
0.00
|
Switch-like differential expression across single-cell trajectories |
BioArchLinuxBot
|
2024-05-03 07:43 (UTC) |
|
r-stemhypoxia
|
1.40.0-1 |
0 |
0.00
|
Differentiation of Human Embryonic Stem Cells under Hypoxia gene expression dataset by Prado-Lopez et al. (2010) |
BioArchLinuxBot
|
2024-05-04 00:32 (UTC) |
|
r-srnadiff
|
1.24.0-1 |
0 |
0.00
|
Finding differentially expressed unannotated genomic regions from RNA-seq data |
BioArchLinuxBot
|
2024-05-03 08:36 (UTC) |
|
r-splinetimer
|
1.32.0-1 |
0 |
0.00
|
Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction |
BioArchLinuxBot
|
2024-05-03 12:28 (UTC) |
|
r-sictools
|
1.34.0-1 |
0 |
0.00
|
Find SNV/Indel differences between two bam files with near relationship |
BioArchLinuxBot
|
2024-05-03 08:44 (UTC) |
|
r-seqgsea
|
1.44.0-1 |
0 |
0.00
|
Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing |
BioArchLinuxBot
|
2024-05-02 23:07 (UTC) |
|
r-seqarchr
|
1.8.0-1 |
0 |
0.00
|
Identify Different Architectures of Sequence Elements |
pekkarr
|
2024-05-02 18:36 (UTC) |
|
r-sde
|
2.0.18-1 |
0 |
0.00
|
Simulation and Inference for Stochastic Differential Equations |
AlexBocken
|
2024-01-11 20:26 (UTC) |
|
r-sdams
|
1.24.0-1 |
0 |
0.00
|
Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data |
BioArchLinuxBot
|
2024-05-02 19:09 (UTC) |
|
r-scshapes
|
1.10.0-1 |
0 |
0.00
|
A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data |
BioArchLinuxBot
|
2024-05-01 19:50 (UTC) |
|
r-scde
|
2.32.0-1 |
0 |
0.00
|
Single Cell Differential Expression |
BioArchLinuxBot
|
2024-05-01 22:45 (UTC) |
|
r-scdd
|
1.28.0-1 |
0 |
0.00
|
Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions |
BioArchLinuxBot
|
2024-05-03 01:34 (UTC) |
|
r-scbn
|
1.22.0-1 |
0 |
0.00
|
A statistical normalization method and differential expression analysis for RNA-seq data between different species |
BioArchLinuxBot
|
2024-05-02 03:14 (UTC) |
|
r-saturn
|
1.12.0-1 |
0 |
0.00
|
Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications |
BioArchLinuxBot
|
2024-05-02 19:39 (UTC) |
|
r-rvisdiff
|
1.2.0-1 |
0 |
0.00
|
Interactive Graphs for Differential Expression |
pekkarr
|
2024-05-02 05:46 (UTC) |
|
r-roseq
|
1.16.0-1 |
0 |
0.00
|
Modeling expression ranks for noise-tolerant differential expression analysis of scRNA-Seq data |
BioArchLinuxBot
|
2024-05-01 18:58 (UTC) |
|
r-rootsolve
|
1.8.2.4-2 |
1 |
0.00
|
Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations |
BioArchLinuxBot
|
2024-02-29 00:01 (UTC) |
|
r-rolde
|
1.8.0-1 |
0 |
0.00
|
Robust longitudinal Differential Expression |
pekkarr
|
2024-05-02 20:23 (UTC) |
|
r-roar
|
1.40.0-1 |
0 |
0.00
|
Identify differential APA usage from RNA-seq alignments |
BioArchLinuxBot
|
2024-05-03 00:55 (UTC) |
|
r-rnamodr.ml
|
1.18.0-1 |
0 |
0.00
|
Detecting patterns of post-transcriptional modifications using machine learning |
BioArchLinuxBot
|
2024-05-03 06:33 (UTC) |
|
r-rnamodr.alkanilineseq
|
1.18.0-1 |
0 |
0.00
|
Detection of m7G, m3C and D modification by AlkAnilineSeq |
BioArchLinuxBot
|
2024-05-03 06:31 (UTC) |
|
r-rnamodr
|
1.18.0-1 |
0 |
0.00
|
Detection of post-transcriptional modifications in high throughput sequencing data |
BioArchLinuxBot
|
2024-05-04 18:36 (UTC) |
|
r-rificomparative
|
1.4.0-1 |
0 |
0.00
|
'rifiComparative' compares the output of rifi from two different conditions |
pekkarr
|
2024-05-03 01:17 (UTC) |
|
r-ribodipa
|
1.10.0-1 |
0 |
0.00
|
Differential pattern analysis for Ribo-seq data |
BioArchLinuxBot
|
2023-10-27 10:42 (UTC) |
|
r-regsplice
|
1.30.0-1 |
0 |
0.00
|
L1-regularization based methods for detection of differential splicing |
BioArchLinuxBot
|
2024-05-02 19:19 (UTC) |
|
r-rcppziggurat
|
0.1.6-9 |
0 |
0.00
|
'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations |
BioArchLinuxBot
|
2024-04-25 04:57 (UTC) |
|
r-rcppde
|
0.1.7-1 |
0 |
0.00
|
Global Optimization by Differential Evolution in C++ |
BioArchLinuxBot
|
2022-12-20 12:01 (UTC) |
|
r-rcade
|
1.39.1-4 |
0 |
0.00
|
R-based analysis of ChIP-seq And Differential Expression - a tool for integrating a count-based ChIP-seq analysis with differential expression summary data |
BioArchLinuxBot
|
2023-04-29 06:08 (UTC) |
|
r-rankprod
|
3.30.0-1 |
0 |
0.00
|
Rank Product method for identifying differentially expressed genes with application in meta-analysis |
BioArchLinuxBot
|
2024-05-01 18:36 (UTC) |
|
r-proteomm
|
1.22.0-1 |
0 |
0.00
|
Multi-Dataset Model-based Differential Expression Proteomics Analysis Platform |
BioArchLinuxBot
|
2024-05-02 23:10 (UTC) |
|
r-proda
|
1.18.0-1 |
0 |
0.00
|
Differential Abundance Analysis of Label-Free Mass Spectrometry Data |
BioArchLinuxBot
|
2024-05-02 19:43 (UTC) |
|
r-plpe
|
1.64.0-1 |
0 |
0.00
|
Local Pooled Error Test for Differential Expression with Paired High-throughput Data |
BioArchLinuxBot
|
2024-05-02 12:34 (UTC) |
|
r-plgem
|
1.76.0-1 |
0 |
0.00
|
Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM) |
BioArchLinuxBot
|
2024-05-02 12:24 (UTC) |
|
r-phater
|
1.0.7-3 |
0 |
0.00
|
PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
|
r-pathvar
|
1.30.0-2 |
0 |
0.00
|
Methods to Find Pathways with Significantly Different Variability |
BioArchLinuxBot
|
2024-02-11 12:05 (UTC) |
|
r-pairadise
|
1.20.0-1 |
0 |
0.00
|
PAIRADISE: Paired analysis of differential isoform expression |
BioArchLinuxBot
|
2024-05-02 19:28 (UTC) |
|
r-organismdbi
|
1.46.0-1 |
0 |
0.00
|
Software to enable the smooth interfacing of different database packages |
BioArchLinuxBot
|
2024-05-03 12:08 (UTC) |
|
r-ntw
|
1.54.0-1 |
0 |
0.00
|
Predict gene network using an Ordinary Differential Equation (ODE) based method |
BioArchLinuxBot
|
2024-05-02 04:28 (UTC) |
|
r-normr
|
1.30.0-1 |
0 |
0.00
|
Normalization and difference calling in ChIP-seq data |
BioArchLinuxBot
|
2024-05-03 01:03 (UTC) |
|
r-normalyzerde
|
1.22.0-1 |
0 |
0.00
|
Evaluation of normalization methods and calculation of differential expression analysis statistics |
BioArchLinuxBot
|
2024-05-02 19:54 (UTC) |
|
r-noiseq
|
2.48.0-1 |
0 |
0.00
|
Exploratory analysis and differential expression for RNA-seq data |
BioArchLinuxBot
|
2024-05-02 12:31 (UTC) |
|
r-nbsplice
|
1.15.0-3 |
0 |
0.00
|
Negative Binomial Models to detect Differential Splicing |
BioArchLinuxBot
|
2023-11-05 18:02 (UTC) |
|
r-nanostringdiff
|
1.34.0-1 |
0 |
0.00
|
Differential Expression Analysis of NanoString nCounter Data |
BioArchLinuxBot
|
2024-05-01 18:26 (UTC) |
|
r-multirnaflow
|
1.0.0-3 |
0 |
0.00
|
An R package for analysing RNA-seq raw counts with several biological conditions and different time points |
pekkarr
|
2024-04-27 06:59 (UTC) |
|
r-multihiccompare
|
1.22.0-1 |
0 |
0.00
|
Normalize and detect differences between Hi-C datasets when replicates of each experimental condition are available |
BioArchLinuxBot
|
2024-05-03 00:24 (UTC) |
|
r-msstatstmtptm
|
1.1.2-3 |
0 |
0.00
|
Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling |
BioArchLinuxBot
|
2022-06-07 13:18 (UTC) |
|
r-msstatsptm
|
2.6.0-1 |
0 |
0.00
|
Statistical Characterization of Post-translational Modifications |
BioArchLinuxBot
|
2024-05-02 00:59 (UTC) |
|
r-msmstests
|
1.42.0-1 |
0 |
0.00
|
LC-MS/MS Differential Expression Tests |
BioArchLinuxBot
|
2024-05-03 04:03 (UTC) |