742 packages found. Page 2 of 15.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-msmstests 1.42.0-1 0 0.00 LC-MS/MS Differential Expression Tests BioArchLinuxBot 2024-05-03 04:03 (UTC)
r-condiments 1.12.0-1 0 0.00 Differential Topology, Progression and Differentiation BioArchLinuxBot 2024-05-03 03:54 (UTC)
r-ancombc 2.6.0-1 0 0.00 Microbiome differential abudance and correlation analyses with bias correction BioArchLinuxBot 2024-05-03 03:52 (UTC)
r-methylinheritance 1.28.0-1 0 0.00 Permutation-Based Analysis associating Conserved Differentially Methylated Elements Across Multiple Generations to a Treatment Effect BioArchLinuxBot 2024-05-03 03:38 (UTC)
r-mmdiff2 1.32.0-1 0 0.00 Statistical Testing for ChIP-Seq data sets BioArchLinuxBot 2024-05-03 03:14 (UTC)
r-diffhic 1.36.0-1 0 0.00 Differential Analyis of Hi-C Data BioArchLinuxBot 2024-05-03 03:12 (UTC)
r-hicdoc 1.6.0-1 0 0.00 A/B compartment detection and differential analysis pekkarr 2024-05-03 02:13 (UTC)
r-dep 1.26.0-1 0 0.00 Differential Enrichment analysis of Proteomics data BioArchLinuxBot 2024-05-03 02:08 (UTC)
r-airpart 1.12.0-1 0 0.00 Differential cell-type-specific allelic imbalance BioArchLinuxBot 2024-05-03 01:50 (UTC)
r-distinct 1.16.0-1 0 0.00 distinct: a method for differential analyses via hierarchical permutation tests BioArchLinuxBot 2024-05-03 01:48 (UTC)
r-meb 1.18.0-1 0 0.00 A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq data BioArchLinuxBot 2024-05-03 01:39 (UTC)
r-scdd 1.28.0-1 0 0.00 Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions BioArchLinuxBot 2024-05-03 01:34 (UTC)
r-rificomparative 1.4.0-1 0 0.00 'rifiComparative' compares the output of rifi from two different conditions pekkarr 2024-05-03 01:17 (UTC)
r-dmchmm 1.26.0-1 0 0.00 Differentially Methylated CpG using Hidden Markov Model BioArchLinuxBot 2024-05-03 01:10 (UTC)
r-dmcfb 1.18.0-1 0 0.00 Differentially Methylated Cytosines via a Bayesian Functional Approach BioArchLinuxBot 2024-05-03 01:07 (UTC)
r-normr 1.30.0-1 0 0.00 Normalization and difference calling in ChIP-seq data BioArchLinuxBot 2024-05-03 01:03 (UTC)
r-excluster 1.22.0-1 0 0.00 ExCluster robustly detects differentially expressed exons between two conditions of RNA-seq data, requiring at least two independent biological replicates per condition BioArchLinuxBot 2024-05-03 00:59 (UTC)
r-roar 1.40.0-1 0 0.00 Identify differential APA usage from RNA-seq alignments BioArchLinuxBot 2024-05-03 00:55 (UTC)
r-multihiccompare 1.22.0-1 0 0.00 Normalize and detect differences between Hi-C datasets when replicates of each experimental condition are available BioArchLinuxBot 2024-05-03 00:24 (UTC)
r-chromstar 1.30.0-1 0 0.00 Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data BioArchLinuxBot 2024-05-02 23:41 (UTC)
r-proteomm 1.22.0-1 0 0.00 Multi-Dataset Model-based Differential Expression Proteomics Analysis Platform BioArchLinuxBot 2024-05-02 23:10 (UTC)
r-seqgsea 1.44.0-1 0 0.00 Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing BioArchLinuxBot 2024-05-02 23:07 (UTC)
r-censcyt 1.12.0-1 0 0.00 Differential abundance analysis with a right censored covariate in high-dimensional cytometry BioArchLinuxBot 2024-05-02 23:00 (UTC)
r-gg4way 1.2.0-1 0 0.00 4way Plots of Differential Expression pekkarr 2024-05-02 22:20 (UTC)
r-delocal 1.4.0-1 0 0.00 Identifies differentially expressed genes with respect to other local genes pekkarr 2024-05-02 22:19 (UTC)
r-genetonic 2.8.0-1 0 0.00 Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis BioArchLinuxBot 2024-05-02 22:16 (UTC)
r-desubs 1.30.0-1 0 0.00 DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments BioArchLinuxBot 2024-05-02 22:13 (UTC)
r-dewseq 1.18.0-1 0 0.00 Differential Expressed Windows Based on Negative Binomial Distribution BioArchLinuxBot 2024-05-02 22:08 (UTC)
r-deformats 1.32.0-1 0 0.00 Differential gene expression data formats converter BioArchLinuxBot 2024-05-02 22:05 (UTC)
r-waddr 1.18.0-1 0 0.00 Statistical tests for detecting differential distributions based on the 2-Wasserstein distance BioArchLinuxBot 2024-05-02 21:51 (UTC)
r-differentialregulation 2.2.0-1 0 0.00 Differentially regulated genes from scRNA-seq data pekkarr 2024-05-02 21:45 (UTC)
r-fishpond 2.10.0-1 0 0.00 Fishpond: differential transcript and gene expression with inferential replicates BioArchLinuxBot 2024-05-02 21:41 (UTC)
r-cydar 1.28.0-1 0 0.00 Using Mass Cytometry for Differential Abundance Analyses BioArchLinuxBot 2024-05-02 21:37 (UTC)
r-destiny 3.18.0-1 0 0.00 Creates diffusion maps BioArchLinuxBot 2024-05-02 21:33 (UTC)
r-aggregatebiovar 1.14.0-1 0 0.00 Differential Gene Expression Analysis for Multi-subject scRNA-seq BioArchLinuxBot 2024-05-02 21:29 (UTC)
r-dce 1.12.0-1 0 0.00 Pathway Enrichment Based on Differential Causal Effects BioArchLinuxBot 2024-05-02 21:03 (UTC)
r-cocitestats 1.76.0-1 0 0.00 Different test statistics based on co-citation. BioArchLinuxBot 2024-05-02 20:59 (UTC)
r-diffcoexp 1.24.0-1 0 0.00 Differential Co-expression Analysis BioArchLinuxBot 2024-05-02 20:55 (UTC)
r-csdr 1.10.0-1 0 0.00 Differential gene co-expression BioArchLinuxBot 2024-05-02 20:54 (UTC)
r-moda 1.30.0-1 0 0.00 MODA: MOdule Differential Analysis for weighted gene co-expression network BioArchLinuxBot 2024-05-02 20:53 (UTC)
r-diffcyt 1.24.0-1 0 0.00 Differential discovery in high-dimensional cytometry via high-resolution clustering BioArchLinuxBot 2024-05-02 20:28 (UTC)
r-cytokernel 1.10.0-1 0 0.00 Differential expression using kernel-based score test BioArchLinuxBot 2024-05-02 20:27 (UTC)
r-rolde 1.8.0-1 0 0.00 Robust longitudinal Differential Expression pekkarr 2024-05-02 20:23 (UTC)
r-normalyzerde 1.22.0-1 0 0.00 Evaluation of normalization methods and calculation of differential expression analysis statistics BioArchLinuxBot 2024-05-02 19:54 (UTC)
r-proda 1.18.0-1 0 0.00 Differential Abundance Analysis of Label-Free Mass Spectrometry Data BioArchLinuxBot 2024-05-02 19:43 (UTC)
r-saturn 1.12.0-1 0 0.00 Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications BioArchLinuxBot 2024-05-02 19:39 (UTC)
r-pairadise 1.20.0-1 0 0.00 PAIRADISE: Paired analysis of differential isoform expression BioArchLinuxBot 2024-05-02 19:28 (UTC)
r-hummingbird 1.14.0-1 0 0.00 Bayesian Hidden Markov Model for the detection of differentially methylated regions BioArchLinuxBot 2024-05-02 19:22 (UTC)
r-regsplice 1.30.0-1 0 0.00 L1-regularization based methods for detection of differential splicing BioArchLinuxBot 2024-05-02 19:19 (UTC)
r-aldex2 1.36.0-1 0 0.00 Analysis Of Differential Abundance Taking Sample Variation Into Account BioArchLinuxBot 2024-05-02 19:17 (UTC)

742 packages found. Page 2 of 15.

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