742 packages found. Page 7 of 15.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-les 1.54.0-1 0 0.00 Identifying Differential Effects in Tiling Microarray Data BioArchLinuxBot 2024-05-01 18:50 (UTC)
r-iseede 1.2.0-1 0 0.00 iSEE extension for panels related to differential expression analysis pekkarr 2024-05-03 18:46 (UTC)
r-indeed 2.18.0-1 0 0.00 Interactive Visualization of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection Package BioArchLinuxBot 2024-05-01 21:47 (UTC)
r-iggeneusage 1.16.0-3 0 0.00 Differential gene usage in immune repertoires BioArchLinuxBot 2024-02-08 13:24 (UTC)
r-ideal 1.26.0-1 0 0.00 Interactive Differential Expression AnaLysis BioArchLinuxBot 2023-10-28 15:18 (UTC)
r-hummingbird 1.14.0-1 0 0.00 Bayesian Hidden Markov Model for the detection of differentially methylated regions BioArchLinuxBot 2024-05-02 19:22 (UTC)
r-hsmmsinglecell 1.24.0-1 0 0.00 Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts (HSMM) BioArchLinuxBot 2024-05-04 00:25 (UTC)
r-hicdoc 1.6.0-1 0 0.00 A/B compartment detection and differential analysis pekkarr 2024-05-03 02:13 (UTC)
r-hem 1.76.0-1 0 0.00 Heterogeneous error model for identification of differentially expressed genes under multiple conditions BioArchLinuxBot 2024-05-02 12:30 (UTC)
r-gg4way 1.2.0-1 0 0.00 4way Plots of Differential Expression pekkarr 2024-05-02 22:20 (UTC)
r-geodiff 1.10.0-1 0 0.00 Count model based differential expression and normalization on GeoMx RNA data BioArchLinuxBot 2024-05-02 02:28 (UTC)
r-genomicozone 1.18.0-1 0 0.00 Delineate outstanding genomic zones of differential gene activity BioArchLinuxBot 2024-05-03 13:26 (UTC)
r-genetonic 2.8.0-1 0 0.00 Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis BioArchLinuxBot 2024-05-02 22:16 (UTC)
r-generxcluster 1.40.0-1 0 0.00 gRx Differential Clustering BioArchLinuxBot 2024-05-01 22:14 (UTC)
r-gemma.r 3.0.3-1 0 0.00 A wrapper for Gemma's Restful API to access curated gene expression data and differential expression analyses pekkarr 2024-05-07 12:22 (UTC)
r-gdnainrnaseqdata 1.4.0-1 0 0.00 RNA-seq data with different levels of gDNA contamination pekkarr 2024-05-04 01:03 (UTC)
r-fracdiff 1.5.3-2 0 0.00 Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models BioArchLinuxBot 2024-02-29 18:01 (UTC)
r-flowgraph 1.12.0-1 0 0.00 Identifying differential cell populations in flow cytometry data accounting for marker frequency BioArchLinuxBot 2024-05-01 21:33 (UTC)
r-fishpond 2.10.0-1 0 0.00 Fishpond: differential transcript and gene expression with inferential replicates BioArchLinuxBot 2024-05-02 21:41 (UTC)
r-fci 1.34.0-1 0 0.00 f-divergence Cutoff Index for Differential Expression Analysis in Transcriptomics and Proteomics BioArchLinuxBot 2024-05-01 20:57 (UTC)
r-excluster 1.22.0-1 0 0.00 ExCluster robustly detects differentially expressed exons between two conditions of RNA-seq data, requiring at least two independent biological replicates per condition BioArchLinuxBot 2024-05-03 00:59 (UTC)
r-erccdashboard 1.38.0-1 0 0.00 Assess Differential Gene Expression Experiments with ERCC Controls BioArchLinuxBot 2024-05-01 23:26 (UTC)
r-entropyexplorer 1.1-4 0 0.00 Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression BioArchLinuxBot 2022-06-06 01:05 (UTC)
r-emdomics 2.34.0-1 0 0.00 Earth Mover's Distance for Differential Analysis of Genomics Data BioArchLinuxBot 2024-05-01 20:32 (UTC)
r-edge 2.36.0-1 0 0.00 Extraction of Differential Gene Expression BioArchLinuxBot 2024-05-02 02:40 (UTC)
r-ebseq 2.2.0-1 0 0.00 An R package for gene and isoform differential expression analysis of RNA-seq data BioArchLinuxBot 2024-05-02 04:46 (UTC)
r-ebcoexpress 1.48.0-1 0 0.00 EBcoexpress for Differential Co-Expression Analysis BioArchLinuxBot 2024-05-01 18:54 (UTC)
r-ebarrays 2.68.0-1 0 0.00 Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification BioArchLinuxBot 2024-05-02 12:17 (UTC)
r-dstruct 1.10.0-1 0 0.00 Identifying differentially reactive regions from RNA structurome profiling data BioArchLinuxBot 2024-05-01 22:00 (UTC)
r-drimseq 1.32.0-1 0 0.00 Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq BioArchLinuxBot 2024-05-01 22:25 (UTC)
r-dreamlet 1.2.0-1 0 0.00 Scalable differential expression analysis of single cell transcriptomics datasets with complex study designs pekkarr 2024-05-03 14:42 (UTC)
r-dmrseq 1.24.0-1 0 0.00 Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing BioArchLinuxBot 2024-05-03 05:32 (UTC)
r-dmrscan 1.26.0-1 0 0.00 Detection of Differentially Methylated Regions BioArchLinuxBot 2024-05-01 22:19 (UTC)
r-dmrforpairs 1.35.0-2 0 0.00 identifying Differentially Methylated Regions between unique samples using array based methylation profiles BioArchLinuxBot 2024-02-11 18:14 (UTC)
r-dmrcaller 1.36.0-1 0 0.00 Differentially Methylated Regions caller BioArchLinuxBot 2024-05-01 22:17 (UTC)
r-dmchmm 1.26.0-1 0 0.00 Differentially Methylated CpG using Hidden Markov Model BioArchLinuxBot 2024-05-03 01:10 (UTC)
r-dmcfb 1.18.0-1 0 0.00 Differentially Methylated Cytosines via a Bayesian Functional Approach BioArchLinuxBot 2024-05-03 01:07 (UTC)
r-distinct 1.16.0-1 0 0.00 distinct: a method for differential analyses via hierarchical permutation tests BioArchLinuxBot 2024-05-03 01:48 (UTC)
r-discordant 1.28.0-1 0 0.00 The Discordant Method: A Novel Approach for Differential Correlation BioArchLinuxBot 2024-05-01 20:08 (UTC)
r-diffviewer 0.1.1-1 0 0.00 HTML Widget to Show File Differences peippo 2023-03-21 10:27 (UTC)
r-diffutr 1.12.0-1 0 0.00 diffUTR: Streamlining differential exon and 3' UTR usage BioArchLinuxBot 2024-05-03 13:46 (UTC)
r-diffustats 1.24.0-1 0 0.00 Diffusion scores on biological networks BioArchLinuxBot 2024-05-02 05:36 (UTC)
r-diffusionmap 1.2.0-3 0 0.00 Diffusion Map pekkarr 2024-04-25 13:10 (UTC)
r-diffr 0.1-4 0 0.00 Display Differences Between Two Files using Codediff Library BioArchLinuxBot 2022-06-06 00:09 (UTC)
r-diffloop 1.24.0-4 0 0.00 Identifying differential DNA loops from chromatin topology data BioArchLinuxBot 2022-11-04 06:35 (UTC)
r-difflogo 2.28.0-1 0 0.00 DiffLogo: A comparative visualisation of biooligomer motifs BioArchLinuxBot 2024-05-01 18:10 (UTC)
r-diffhic 1.36.0-1 0 0.00 Differential Analyis of Hi-C Data BioArchLinuxBot 2024-05-03 03:12 (UTC)
r-diffgeneanalysis 1.86.0-1 0 0.00 Performs differential gene expression Analysis BioArchLinuxBot 2024-05-02 04:37 (UTC)
r-differentialregulation 2.2.0-1 0 0.00 Differentially regulated genes from scRNA-seq data pekkarr 2024-05-02 21:45 (UTC)
r-diffcyt 1.24.0-1 0 0.00 Differential discovery in high-dimensional cytometry via high-resolution clustering BioArchLinuxBot 2024-05-02 20:28 (UTC)

742 packages found. Page 7 of 15.

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