r-enmix
|
1.40.0-1 |
0 |
0.00
|
Quality control and analysis tools for Illumina DNA methylation BeadChip |
BioArchLinuxBot
|
2024-05-04 01:18 (UTC) |
r-gdnainrnaseqdata
|
1.4.0-1 |
0 |
0.00
|
RNA-seq data with different levels of gDNA contamination |
pekkarr
|
2024-05-04 01:03 (UTC) |
r-motifstack
|
1.48.0-1 |
0 |
0.00
|
Plot stacked logos for single or multiple DNA, RNA and amino acid sequence |
BioArchLinuxBot
|
2024-05-03 18:57 (UTC) |
r-methylclock
|
1.10.0-1 |
0 |
0.00
|
Methylclock - DNA methylation-based clocks |
BioArchLinuxBot
|
2024-05-03 15:11 (UTC) |
r-methylcc
|
1.18.0-1 |
0 |
0.00
|
Estimate the cell composition of whole blood in DNA methylation samples |
BioArchLinuxBot
|
2024-05-03 15:09 (UTC) |
r-epimutacions
|
1.8.0-1 |
0 |
0.00
|
Robust outlier identification for DNA methylation data |
pekkarr
|
2024-05-03 14:30 (UTC) |
r-conumee
|
1.38.0-1 |
0 |
0.00
|
Enhanced copy-number variation analysis using Illumina DNA methylation arrays |
BioArchLinuxBot
|
2024-05-03 14:29 (UTC) |
r-inetgrate
|
1.2.0-1 |
0 |
0.00
|
Integrates DNA methylation data with gene expression in a single gene network |
pekkarr
|
2024-05-03 14:23 (UTC) |
r-methylaid
|
1.38.0-1 |
0 |
0.00
|
Visual and interactive quality control of large Illumina DNA Methylation array data sets |
BioArchLinuxBot
|
2024-05-03 14:21 (UTC) |
r-recountmethylation
|
1.14.0-1 |
0 |
0.00
|
Access and analyze DNA methylation database compilations |
BioArchLinuxBot
|
2024-05-03 14:20 (UTC) |
r-minfi
|
1.50.0-1 |
1 |
0.14
|
Analyze Illumina Infinium DNA methylation arrays |
BioArchLinuxBot
|
2024-05-03 13:03 (UTC) |
r-sesame
|
1.22.0-1 |
0 |
0.00
|
SEnsible Step-wise Analysis of DNA MEthylation BeadChips |
BioArchLinuxBot
|
2024-05-03 09:24 (UTC) |
r-methylpipe
|
1.38.0-1 |
0 |
0.00
|
Base resolution DNA methylation data analysis |
BioArchLinuxBot
|
2024-05-03 08:35 (UTC) |
r-cexor
|
1.42.0-1 |
0 |
0.00
|
An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates |
BioArchLinuxBot
|
2024-05-03 05:18 (UTC) |
r-cfdnapro
|
1.10.0-1 |
0 |
0.00
|
cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy |
BioArchLinuxBot
|
2024-05-03 03:33 (UTC) |
r-scope
|
1.16.0-1 |
0 |
0.00
|
A normalization and copy number estimation method for single-cell DNA sequencing |
BioArchLinuxBot
|
2024-05-03 03:23 (UTC) |
r-medips
|
1.56.0-1 |
0 |
0.00
|
DNA IP-seq data analysis |
BioArchLinuxBot
|
2024-05-03 03:16 (UTC) |
r-periodicdna
|
1.14.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2024-05-03 03:08 (UTC) |
r-dnafusion
|
1.6.0-1 |
0 |
0.00
|
Identification of gene fusions using paired-end sequencing |
pekkarr
|
2024-05-03 02:54 (UTC) |
r-motifdb
|
1.46.0-1 |
0 |
0.00
|
An Annotated Collection of Protein-DNA Binding Sequence Motifs |
BioArchLinuxBot
|
2024-05-03 00:58 (UTC) |
r-methylkit
|
1.30.0-1 |
0 |
0.00
|
DNA methylation analysis from high-throughput bisulfite sequencing results |
BioArchLinuxBot
|
2024-05-03 00:57 (UTC) |
r-mbpcr
|
1.58.0-1 |
0 |
0.00
|
Bayesian Piecewise Constant Regression for DNA copy number estimation |
BioArchLinuxBot
|
2024-05-02 22:42 (UTC) |
r-scmet
|
1.6.0-1 |
0 |
0.00
|
Bayesian modelling of cell-to-cell DNA methylation heterogeneity |
pekkarr
|
2024-05-02 21:48 (UTC) |
r-cfdnakit
|
1.2.0-1 |
0 |
0.00
|
Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA) |
pekkarr
|
2024-05-02 21:16 (UTC) |
r-rprimer
|
1.8.0-1 |
0 |
0.00
|
Design Degenerate Oligos from a Multiple DNA Sequence Alignment |
pekkarr
|
2024-05-02 18:38 (UTC) |
r-methped
|
1.32.0-1 |
0 |
0.00
|
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes |
BioArchLinuxBot
|
2024-05-02 12:46 (UTC) |
r-plasmut
|
1.2.0-1 |
0 |
0.00
|
Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-dnabarcodes
|
1.34.0-1 |
0 |
0.00
|
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments |
BioArchLinuxBot
|
2024-05-02 04:44 (UTC) |
r-mbamethyl
|
1.38.0-1 |
0 |
0.00
|
Model-based analysis of DNA methylation data |
BioArchLinuxBot
|
2024-05-02 03:33 (UTC) |
r-dnacopy
|
1.78.0-1 |
0 |
0.00
|
DNA Copy Number Data Analysis |
BioArchLinuxBot
|
2024-05-02 03:19 (UTC) |
r-seqlogo
|
1.70.0-1 |
0 |
0.00
|
Sequence logos for DNA sequence alignments |
BioArchLinuxBot
|
2024-05-02 03:17 (UTC) |
r-qdnaseq
|
1.40.0-1 |
0 |
0.00
|
Quantitative DNA Sequencing for Chromosomal Aberrations |
BioArchLinuxBot
|
2024-05-02 01:59 (UTC) |
r-motifcounter
|
1.28.0-1 |
0 |
0.00
|
R package for analysing TFBSs in DNA sequences |
BioArchLinuxBot
|
2024-05-02 00:22 (UTC) |
r-dnashaper
|
1.32.0-1 |
0 |
0.00
|
High-throughput prediction of DNA shape features |
BioArchLinuxBot
|
2024-05-02 00:17 (UTC) |
r-triplex
|
1.44.0-1 |
0 |
0.00
|
Search and visualize intramolecular triplex-forming sequences in DNA |
BioArchLinuxBot
|
2024-05-02 00:16 (UTC) |
r-bcrank
|
1.66.0-1 |
0 |
0.00
|
Predicting binding site consensus from ranked DNA sequences |
BioArchLinuxBot
|
2024-05-02 00:08 (UTC) |
r-nnnorm
|
2.68.0-1 |
0 |
0.00
|
Spatial and intensity based normalization of cDNA microarray data based on robust neural nets |
BioArchLinuxBot
|
2024-05-01 22:53 (UTC) |
r-stepnorm
|
1.76.0-1 |
0 |
0.00
|
Stepwise normalization functions for cDNA microarrays |
BioArchLinuxBot
|
2024-05-01 22:52 (UTC) |
r-alphabeta
|
1.18.0-1 |
0 |
0.00
|
Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants |
BioArchLinuxBot
|
2024-05-01 21:28 (UTC) |
r-podcall
|
1.12.0-1 |
0 |
0.00
|
Positive Droplet Calling for DNA Methylation Droplet Digital PCR |
BioArchLinuxBot
|
2024-05-01 21:04 (UTC) |
r-frenchfish
|
1.16.0-1 |
0 |
0.00
|
Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections |
BioArchLinuxBot
|
2024-05-01 20:45 (UTC) |
r-ledpred
|
1.38.0-1 |
0 |
0.00
|
Learning from DNA to Predict Enhancers |
BioArchLinuxBot
|
2024-05-01 20:28 (UTC) |
r-dnabarcodecompatibility
|
1.20.0-1 |
0 |
0.00
|
A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms |
BioArchLinuxBot
|
2024-05-01 20:10 (UTC) |
r-planet
|
1.12.0-1 |
0 |
0.00
|
Placental DNA methylation analysis tools |
BioArchLinuxBot
|
2024-05-01 20:06 (UTC) |
r-beclear
|
2.20.0-1 |
0 |
0.00
|
Correction of batch effects in DNA methylation data |
BioArchLinuxBot
|
2024-05-01 19:59 (UTC) |
r-glad
|
2.68.0-1 |
0 |
0.00
|
Gain and Loss Analysis of DNA |
BioArchLinuxBot
|
2024-05-01 18:38 (UTC) |
r-epimix
|
1.4.0-4 |
0 |
0.00
|
an integrative tool for the population-level analysis of DNA methylation |
pekkarr
|
2024-04-27 22:00 (UTC) |
r-genomautomorphism
|
1.4.0-3 |
0 |
0.00
|
Compute the automorphisms between DNA's Abelian group representations |
pekkarr
|
2024-04-26 17:53 (UTC) |
r-msa2dist
|
1.6.0-3 |
0 |
0.00
|
MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis |
pekkarr
|
2024-04-26 17:52 (UTC) |
mednaffe
|
0.9.3-1 |
37 |
1.94
|
front-end (GUI) for mednafen emulator |
Vaporeon
|
2024-04-22 04:08 (UTC) |