147 packages found. Page 1 of 3.

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Name Version Votes Popularity? Description Maintainer Last Updated
libretro-mednafen-supergrafx-git 743.0d4d964-1 5 0.00 libretro implementation of Mednafen's PCE Fast. (SuperGrafx, TG-16, PC Engine, TG-CD) orphan 2018-08-08 14:03 (UTC)
mapdamage 2.0.9-1 0 0.00 Tracking and quantifying damage patterns in ancient DNA sequences orphan 2019-09-08 10:59 (UTC)
mednafen-server 0.5.2-1 4 0.00 Server for Mednafen network game. orphan 2016-06-10 12:28 (UTC)
meme 5.5.1-1 7 0.00 The MEME suite provides tools for discovering and using protein and DNA sequence motifs orphan 2023-02-17 07:40 (UTC)
mingw-w64-libidn 1.40-1 8 0.00 Implementation of the Stringprep, Punycode and IDNA specifications (mingw-w64) orphan 2022-06-23 12:50 (UTC)
motifsampler 3.2-1 0 0.00 The Gibbs Motif Sampler for identifying motifs, conserved regions, in DNA or protein sequences orphan 2024-02-18 08:06 (UTC)
python-idna_ssl 1.1.0-6 0 0.00 Patch ssl.match_hostname for Unicode(idna_ssl) domains support orphan 2023-04-13 09:10 (UTC)
x3dna 2.4.4_20190909-1 0 0.00 3DNA is a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid-containing structures. Please see: http://forum.x3dna.org/site-announcements/download-instructions/ orphan 2019-09-16 08:03 (UTC)
x3dna-dssr 1.9.10_20200423-1 0 0.00 DSSR, an integrated software tool for Dissecting the Spatial Structure of RNA. Please see: http://forum.x3dna.org/site-announcements/download-instructions/ orphan 2020-05-13 07:21 (UTC)
cadna_c 3.1.11-1 0 0.00 Control of Accuracy and Debugging for Numerical Applications alexei 2023-09-10 23:00 (UTC)
alignace 1.0-6 0 0.00 Program that finds sequence elements conserved in a set of DNA sequences allencch 2017-06-22 17:25 (UTC)
bioprospector 2004-3 0 0.00 A DNA seqence motif finding programs allencch 2017-03-17 14:28 (UTC)
mdscan 2004-3 0 0.00 A DNA seqence motif finding programs allencch 2017-03-17 14:52 (UTC)
python-pytantan 0.1.0-1 0 0.00 Cython bindings and Python interface to Tantan, a fast method for identifying repeats in DNA and protein sequences. althonos 2024-05-08 11:10 (UTC)
pftools 2.3-3 0 0.00 Contains all the software necessary to build protein and DNA generalized profiles and use them to scan and align sequences, and search databases. anadon 2018-04-09 19:44 (UTC)
diamond 2.1.9-1 3 0.00 High performance sequence aligner for protein and translated DNA searches with big sequence data. https://doi.org/10.1038/s41592-021-01101-x BioArchLinuxBot 2024-01-31 18:09 (UTC)
r-alphabeta 1.18.0-1 0 0.00 Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants BioArchLinuxBot 2024-05-01 21:28 (UTC)
r-bcrank 1.66.0-1 0 0.00 Predicting binding site consensus from ranked DNA sequences BioArchLinuxBot 2024-05-02 00:08 (UTC)
r-beclear 2.20.0-1 0 0.00 Correction of batch effects in DNA methylation data BioArchLinuxBot 2024-05-01 19:59 (UTC)
r-cellbarcode 1.10.0-1 0 0.00 Cellular DNA Barcode Analysis toolkit BioArchLinuxBot 2024-05-08 12:08 (UTC)
r-cexor 1.42.0-1 0 0.00 An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates BioArchLinuxBot 2024-05-03 05:18 (UTC)
r-cfdnapro 1.10.0-1 0 0.00 cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy BioArchLinuxBot 2024-05-03 03:33 (UTC)
r-comet 1.34.0-1 0 0.00 coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns BioArchLinuxBot 2023-10-27 14:53 (UTC)
r-conumee 1.38.0-1 0 0.00 Enhanced copy-number variation analysis using Illumina DNA methylation arrays BioArchLinuxBot 2024-05-03 14:29 (UTC)
r-diffloop 1.24.0-4 0 0.00 Identifying differential DNA loops from chromatin topology data BioArchLinuxBot 2022-11-04 06:35 (UTC)
r-dnabarcodecompatibility 1.20.0-1 0 0.00 A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms BioArchLinuxBot 2024-05-01 20:10 (UTC)
r-dnabarcodes 1.34.0-1 0 0.00 A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments BioArchLinuxBot 2024-05-02 04:44 (UTC)
r-dnacopy 1.78.0-1 0 0.00 DNA Copy Number Data Analysis BioArchLinuxBot 2024-05-02 03:19 (UTC)
r-dnashaper 1.32.0-1 0 0.00 High-throughput prediction of DNA shape features BioArchLinuxBot 2024-05-02 00:17 (UTC)
r-enmix 1.40.0-1 0 0.00 Quality control and analysis tools for Illumina DNA methylation BeadChip BioArchLinuxBot 2024-05-04 01:18 (UTC)
r-fdb.infiniummethylation.hg19 2.2.0-3 0 0.00 Annotation package for Illumina Infinium DNA methylation probes BioArchLinuxBot 2022-06-06 01:34 (UTC)
r-frenchfish 1.16.0-1 0 0.00 Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections BioArchLinuxBot 2024-05-01 20:45 (UTC)
r-fscanr 1.12.0-1 0 0.00 Detect Programmed Ribosomal Frameshifting Events from mRNA/cDNA BLASTX Output BioArchLinuxBot 2024-04-13 18:01 (UTC)
r-glad 2.68.0-1 0 0.00 Gain and Loss Analysis of DNA BioArchLinuxBot 2024-05-01 18:38 (UTC)
r-ledpred 1.38.0-1 0 0.00 Learning from DNA to Predict Enhancers BioArchLinuxBot 2024-05-01 20:28 (UTC)
r-magar 1.12.0-1 0 0.00 R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data BioArchLinuxBot 2024-05-07 12:19 (UTC)
r-maigespack 1.64.0-2 0 0.00 Functions to handle cDNA microarray data, including several methods of data analysis BioArchLinuxBot 2024-02-11 18:05 (UTC)
r-mbamethyl 1.38.0-1 0 0.00 Model-based analysis of DNA methylation data BioArchLinuxBot 2024-05-02 03:33 (UTC)
r-mbpcr 1.58.0-1 0 0.00 Bayesian Piecewise Constant Regression for DNA copy number estimation BioArchLinuxBot 2024-05-02 22:42 (UTC)
r-medips 1.56.0-1 0 0.00 DNA IP-seq data analysis BioArchLinuxBot 2024-05-03 03:16 (UTC)
r-methped 1.32.0-1 0 0.00 A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes BioArchLinuxBot 2024-05-02 12:46 (UTC)
r-methreg 1.14.0-1 0 0.00 Assessing the regulatory potential of DNA methylation regions or sites on gene transcription BioArchLinuxBot 2024-05-07 12:10 (UTC)
r-methylaid 1.38.0-1 0 0.00 Visual and interactive quality control of large Illumina DNA Methylation array data sets BioArchLinuxBot 2024-05-03 14:21 (UTC)
r-methylcc 1.18.0-1 0 0.00 Estimate the cell composition of whole blood in DNA methylation samples BioArchLinuxBot 2024-05-03 15:09 (UTC)
r-methylclock 1.10.0-1 0 0.00 Methylclock - DNA methylation-based clocks BioArchLinuxBot 2024-05-03 15:11 (UTC)
r-methylkit 1.30.0-1 0 0.00 DNA methylation analysis from high-throughput bisulfite sequencing results BioArchLinuxBot 2024-05-03 00:57 (UTC)
r-methylpipe 1.38.0-1 0 0.00 Base resolution DNA methylation data analysis BioArchLinuxBot 2024-05-03 08:35 (UTC)
r-minfi 1.50.0-1 1 0.12 Analyze Illumina Infinium DNA methylation arrays BioArchLinuxBot 2024-05-03 13:03 (UTC)
r-motifcounter 1.28.0-1 0 0.00 R package for analysing TFBSs in DNA sequences BioArchLinuxBot 2024-05-02 00:22 (UTC)
r-motifdb 1.46.0-1 0 0.00 An Annotated Collection of Protein-DNA Binding Sequence Motifs BioArchLinuxBot 2024-05-03 00:58 (UTC)

147 packages found. Page 1 of 3.

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