r-dnabarcodecompatibility
|
1.20.0-1 |
0 |
0.00
|
A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms |
BioArchLinuxBot
|
2024-05-01 20:10 (UTC) |
r-dnabarcodes
|
1.34.0-1 |
0 |
0.00
|
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments |
BioArchLinuxBot
|
2024-05-02 04:44 (UTC) |
r-dnacopy
|
1.78.0-1 |
0 |
0.00
|
DNA Copy Number Data Analysis |
BioArchLinuxBot
|
2024-05-02 03:19 (UTC) |
r-dnafusion
|
1.6.0-1 |
0 |
0.00
|
Identification of gene fusions using paired-end sequencing |
pekkarr
|
2024-05-03 02:54 (UTC) |
r-dnashaper
|
1.32.0-1 |
0 |
0.00
|
High-throughput prediction of DNA shape features |
BioArchLinuxBot
|
2024-05-02 00:17 (UTC) |
r-enmix
|
1.40.0-1 |
0 |
0.00
|
Quality control and analysis tools for Illumina DNA methylation BeadChip |
BioArchLinuxBot
|
2024-05-04 01:18 (UTC) |
r-epimix
|
1.6.1-1 |
0 |
0.00
|
an integrative tool for the population-level analysis of DNA methylation |
pekkarr
|
2024-05-05 18:11 (UTC) |
r-epimutacions
|
1.8.0-1 |
0 |
0.00
|
Robust outlier identification for DNA methylation data |
pekkarr
|
2024-05-03 14:30 (UTC) |
r-fdb.infiniummethylation.hg19
|
2.2.0-3 |
0 |
0.00
|
Annotation package for Illumina Infinium DNA methylation probes |
BioArchLinuxBot
|
2022-06-06 01:34 (UTC) |
r-frenchfish
|
1.16.0-1 |
0 |
0.00
|
Poisson Models for Quantifying DNA Copy-number from FISH Images of Tissue Sections |
BioArchLinuxBot
|
2024-05-01 20:45 (UTC) |
r-fscanr
|
1.12.0-1 |
0 |
0.00
|
Detect Programmed Ribosomal Frameshifting Events from mRNA/cDNA BLASTX Output |
BioArchLinuxBot
|
2024-04-13 18:01 (UTC) |
r-gdnainrnaseqdata
|
1.4.0-1 |
0 |
0.00
|
RNA-seq data with different levels of gDNA contamination |
pekkarr
|
2024-05-04 01:03 (UTC) |
r-gdnax
|
1.2.0-1 |
0 |
0.00
|
Diagnostics for assessing genomic DNA contamination in RNA-seq data |
pekkarr
|
2024-05-05 18:06 (UTC) |
r-genomautomorphism
|
1.4.0-3 |
0 |
0.00
|
Compute the automorphisms between DNA's Abelian group representations |
pekkarr
|
2024-04-26 17:53 (UTC) |
r-glad
|
2.68.0-1 |
0 |
0.00
|
Gain and Loss Analysis of DNA |
BioArchLinuxBot
|
2024-05-01 18:38 (UTC) |
r-inetgrate
|
1.2.0-1 |
0 |
0.00
|
Integrates DNA methylation data with gene expression in a single gene network |
pekkarr
|
2024-05-03 14:23 (UTC) |
r-ledpred
|
1.38.0-1 |
0 |
0.00
|
Learning from DNA to Predict Enhancers |
BioArchLinuxBot
|
2024-05-01 20:28 (UTC) |
r-magar
|
1.12.0-1 |
0 |
0.00
|
R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data |
BioArchLinuxBot
|
2024-05-07 12:19 (UTC) |
r-maigespack
|
1.64.0-2 |
0 |
0.00
|
Functions to handle cDNA microarray data, including several methods of data analysis |
BioArchLinuxBot
|
2024-02-11 18:05 (UTC) |
r-mbamethyl
|
1.38.0-1 |
0 |
0.00
|
Model-based analysis of DNA methylation data |
BioArchLinuxBot
|
2024-05-02 03:33 (UTC) |
r-mbpcr
|
1.58.0-1 |
0 |
0.00
|
Bayesian Piecewise Constant Regression for DNA copy number estimation |
BioArchLinuxBot
|
2024-05-02 22:42 (UTC) |
r-medips
|
1.56.0-1 |
0 |
0.00
|
DNA IP-seq data analysis |
BioArchLinuxBot
|
2024-05-03 03:16 (UTC) |
r-methped
|
1.32.0-1 |
0 |
0.00
|
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes |
BioArchLinuxBot
|
2024-05-02 12:46 (UTC) |
r-methreg
|
1.14.0-1 |
0 |
0.00
|
Assessing the regulatory potential of DNA methylation regions or sites on gene transcription |
BioArchLinuxBot
|
2024-05-07 12:10 (UTC) |
r-methylaid
|
1.38.0-1 |
0 |
0.00
|
Visual and interactive quality control of large Illumina DNA Methylation array data sets |
BioArchLinuxBot
|
2024-05-03 14:21 (UTC) |
r-methylcc
|
1.18.0-1 |
0 |
0.00
|
Estimate the cell composition of whole blood in DNA methylation samples |
BioArchLinuxBot
|
2024-05-03 15:09 (UTC) |
r-methylclock
|
1.10.0-1 |
0 |
0.00
|
Methylclock - DNA methylation-based clocks |
BioArchLinuxBot
|
2024-05-03 15:11 (UTC) |
r-methylkit
|
1.30.0-1 |
0 |
0.00
|
DNA methylation analysis from high-throughput bisulfite sequencing results |
BioArchLinuxBot
|
2024-05-03 00:57 (UTC) |
r-methylpipe
|
1.38.0-1 |
0 |
0.00
|
Base resolution DNA methylation data analysis |
BioArchLinuxBot
|
2024-05-03 08:35 (UTC) |
r-motifcounter
|
1.28.0-1 |
0 |
0.00
|
R package for analysing TFBSs in DNA sequences |
BioArchLinuxBot
|
2024-05-02 00:22 (UTC) |
r-motifdb
|
1.46.0-1 |
0 |
0.00
|
An Annotated Collection of Protein-DNA Binding Sequence Motifs |
BioArchLinuxBot
|
2024-05-03 00:58 (UTC) |
r-motifstack
|
1.48.0-1 |
0 |
0.00
|
Plot stacked logos for single or multiple DNA, RNA and amino acid sequence |
BioArchLinuxBot
|
2024-05-03 18:57 (UTC) |
r-msa2dist
|
1.8.0-1 |
0 |
0.00
|
MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis |
pekkarr
|
2024-05-04 12:18 (UTC) |
r-nnnorm
|
2.68.0-1 |
0 |
0.00
|
Spatial and intensity based normalization of cDNA microarray data based on robust neural nets |
BioArchLinuxBot
|
2024-05-01 22:53 (UTC) |
r-periodicdna
|
1.14.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2024-05-03 03:08 (UTC) |
r-planet
|
1.12.0-1 |
0 |
0.00
|
Placental DNA methylation analysis tools |
BioArchLinuxBot
|
2024-05-01 20:06 (UTC) |
r-plasmut
|
1.2.0-1 |
0 |
0.00
|
Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-podcall
|
1.12.0-1 |
0 |
0.00
|
Positive Droplet Calling for DNA Methylation Droplet Digital PCR |
BioArchLinuxBot
|
2024-05-01 21:04 (UTC) |
r-pscbs
|
0.67.0-1 |
0 |
0.00
|
Analysis of Parent-Specific DNA Copy Numbers |
BioArchLinuxBot
|
2024-02-18 00:02 (UTC) |
r-qdnaseq
|
1.40.0-1 |
0 |
0.00
|
Quantitative DNA Sequencing for Chromosomal Aberrations |
BioArchLinuxBot
|
2024-05-02 01:59 (UTC) |
r-recountmethylation
|
1.14.0-1 |
0 |
0.00
|
Access and analyze DNA methylation database compilations |
BioArchLinuxBot
|
2024-05-03 14:20 (UTC) |
r-reffreeewas
|
2.2-11 |
0 |
0.00
|
EWAS using Reference-Free DNA Methylation Mixture Deconvolution |
BioArchLinuxBot
|
2022-11-27 06:01 (UTC) |
r-rprimer
|
1.8.0-1 |
0 |
0.00
|
Design Degenerate Oligos from a Multiple DNA Sequence Alignment |
pekkarr
|
2024-05-02 18:38 (UTC) |
r-scmet
|
1.6.0-1 |
0 |
0.00
|
Bayesian modelling of cell-to-cell DNA methylation heterogeneity |
pekkarr
|
2024-05-02 21:48 (UTC) |
r-scope
|
1.16.0-1 |
0 |
0.00
|
A normalization and copy number estimation method for single-cell DNA sequencing |
BioArchLinuxBot
|
2024-05-03 03:23 (UTC) |
r-seqlogo
|
1.70.0-1 |
0 |
0.00
|
Sequence logos for DNA sequence alignments |
BioArchLinuxBot
|
2024-05-02 03:17 (UTC) |
r-sesame
|
1.22.0-1 |
0 |
0.00
|
SEnsible Step-wise Analysis of DNA MEthylation BeadChips |
BioArchLinuxBot
|
2024-05-03 09:24 (UTC) |
r-soniclength
|
1.4.7-9 |
0 |
0.00
|
Estimating Abundance of Clones from DNA Fragmentation Data |
BioArchLinuxBot
|
2024-03-07 00:04 (UTC) |
r-stepnorm
|
1.76.0-1 |
0 |
0.00
|
Stepwise normalization functions for cDNA microarrays |
BioArchLinuxBot
|
2024-05-01 22:52 (UTC) |
r-triplex
|
1.44.0-1 |
0 |
0.00
|
Search and visualize intramolecular triplex-forming sequences in DNA |
BioArchLinuxBot
|
2024-05-02 00:16 (UTC) |