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r-iclusterplus
|
1.40.0-1 |
0 |
0.00
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Integrative clustering of multi-type genomic data |
BioArchLinuxBot
|
2024-05-02 03:10 (UTC) |
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r-idr2d
|
1.18.0-1 |
0 |
0.00
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Irreproducible Discovery Rate for Genomic Interactions Data |
BioArchLinuxBot
|
2024-05-01 22:22 (UTC) |
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r-igvr
|
1.24.0-1 |
0 |
0.00
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igvR: integrative genomics viewer |
BioArchLinuxBot
|
2024-05-03 04:44 (UTC) |
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r-illumina450probevariants.db
|
1.40.0-1 |
0 |
0.00
|
Annotation Package combining variant data from 1000 Genomes Project for Illumina HumanMethylation450 Bead Chip probes |
BioArchLinuxBot
|
2024-05-04 00:14 (UTC) |
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r-interactionset
|
1.32.0-1 |
0 |
0.00
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Base Classes for Storing Genomic Interaction Data |
BioArchLinuxBot
|
2024-05-02 19:05 (UTC) |
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r-inversion
|
1.43.0-4 |
0 |
0.00
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Inversions in genotype data |
BioArchLinuxBot
|
2022-11-04 06:32 (UTC) |
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r-isanalytics
|
1.14.0-1 |
0 |
0.00
|
Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies |
BioArchLinuxBot
|
2024-05-01 21:55 (UTC) |
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r-karyoploter
|
1.30.0-1 |
0 |
0.00
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Plot customizable linear genomes displaying arbitrary data |
BioArchLinuxBot
|
2024-05-03 05:41 (UTC) |
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r-keggrest
|
1.44.0-1 |
0 |
0.00
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Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG) |
BioArchLinuxBot
|
2024-05-02 00:00 (UTC) |
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r-loci2path
|
1.24.0-1 |
0 |
0.00
|
Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLs |
BioArchLinuxBot
|
2024-05-01 22:26 (UTC) |
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r-lola
|
1.32.0-1 |
0 |
0.00
|
Locus overlap analysis for enrichment of genomic ranges |
BioArchLinuxBot
|
2023-10-26 02:12 (UTC) |
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r-mafdb.1kgenomes.phase3.hs37d5
|
3.10.0-3 |
0 |
0.00
|
Minor allele frequency data from 1000 Genomes Phase 3 for hs37d5 |
BioArchLinuxBot
|
2022-06-06 06:30 (UTC) |
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r-magar
|
1.12.0-1 |
0 |
0.00
|
R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data |
BioArchLinuxBot
|
2024-05-07 12:19 (UTC) |
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r-mapredictdsc
|
1.42.0-1 |
0 |
0.00
|
Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge |
BioArchLinuxBot
|
2024-05-02 21:08 (UTC) |
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r-matchbox
|
1.46.0-1 |
0 |
0.00
|
Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis |
BioArchLinuxBot
|
2024-05-02 03:22 (UTC) |
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r-metacca
|
1.32.0-1 |
0 |
0.00
|
Summary Statistics-Based Multivariate Meta-Analysis of Genome-Wide Association Studies Using Canonical Correlation Analysis |
BioArchLinuxBot
|
2024-05-02 03:17 (UTC) |
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r-metagenomeseq
|
1.46.0-1 |
0 |
0.00
|
Statistical analysis for sparse high-throughput sequencing |
BioArchLinuxBot
|
2024-05-01 22:55 (UTC) |
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r-methinheritsim
|
1.26.0-1 |
0 |
0.00
|
Simulating Whole-Genome Inherited Bisulphite Sequencing Data |
BioArchLinuxBot
|
2024-05-03 03:37 (UTC) |
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r-mfa
|
1.26.0-1 |
0 |
0.00
|
Bayesian hierarchical mixture of factor analyzers for modelling genomic bifurcations |
BioArchLinuxBot
|
2024-05-02 12:25 (UTC) |
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r-midashla
|
1.12.0-1 |
0 |
0.00
|
R package for immunogenomics data handling and association analysis |
BioArchLinuxBot
|
2024-05-02 22:26 (UTC) |
|
r-mineica
|
1.44.0-1 |
0 |
0.00
|
Analysis of an ICA decomposition obtained on genomics data |
BioArchLinuxBot
|
2024-05-03 15:18 (UTC) |
|
r-mpo.db
|
0.99.7-3 |
0 |
0.00
|
A set of annotation maps describing the Mouse Phenotype Ontology |
BioArchLinuxBot
|
2024-04-26 15:56 (UTC) |
|
r-msgbsr
|
1.26.0-1 |
0 |
0.00
|
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions |
BioArchLinuxBot
|
2023-10-27 15:27 (UTC) |
|
r-mutationalpatterns
|
3.14.0-1 |
0 |
0.00
|
Comprehensive genome-wide analysis of mutational processes |
BioArchLinuxBot
|
2024-05-03 04:51 (UTC) |
|
r-openstats
|
1.16.0-1 |
0 |
0.00
|
A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association |
BioArchLinuxBot
|
2024-05-01 21:42 (UTC) |
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r-orfik
|
1.24.0-1 |
0 |
0.00
|
Open Reading Frames in Genomics |
BioArchLinuxBot
|
2024-05-03 18:14 (UTC) |
|
r-org.bt.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Bovine |
BioArchLinuxBot
|
2024-05-04 12:02 (UTC) |
|
r-org.dm.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Fly |
BioArchLinuxBot
|
2024-05-03 18:08 (UTC) |
|
r-org.dr.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Zebrafish |
BioArchLinuxBot
|
2024-05-03 18:07 (UTC) |
|
r-org.hs.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Human |
BioArchLinuxBot
|
2024-05-02 18:42 (UTC) |
|
r-org.mm.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Mouse |
BioArchLinuxBot
|
2024-05-02 18:43 (UTC) |
|
r-org.rn.eg.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Rat |
BioArchLinuxBot
|
2024-05-02 18:45 (UTC) |
|
r-org.sc.sgd.db
|
3.19.1-1 |
0 |
0.00
|
Genome wide annotation for Yeast |
BioArchLinuxBot
|
2024-05-02 18:46 (UTC) |
|
r-panr
|
1.50.0-1 |
0 |
0.00
|
Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations |
BioArchLinuxBot
|
2024-05-02 18:32 (UTC) |
|
r-panvizgenerator
|
1.22.0-4 |
0 |
0.00
|
Generate PanViz visualisations from your pangenome |
BioArchLinuxBot
|
2022-07-07 06:06 (UTC) |
|
r-pasilla
|
1.32.0-1 |
0 |
0.00
|
Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. |
BioArchLinuxBot
|
2024-05-03 13:45 (UTC) |
|
r-pcan
|
1.32.0-1 |
0 |
0.00
|
Phenotype Consensus ANalysis (PCAN) |
BioArchLinuxBot
|
2024-05-01 19:48 (UTC) |
|
r-pdatk
|
1.12.0-1 |
0 |
0.00
|
Pancreatic Ductal Adenocarcinoma Tool-Kit |
BioArchLinuxBot
|
2024-05-03 00:41 (UTC) |
|
r-pharmacogx
|
3.8.0-1 |
0 |
0.00
|
Analysis of Large-Scale Pharmacogenomic Data |
BioArchLinuxBot
|
2024-05-03 00:40 (UTC) |
|
r-phemd
|
1.18.0-2 |
0 |
0.00
|
Phenotypic EMD for comparison of single-cell samples |
BioArchLinuxBot
|
2024-04-28 18:00 (UTC) |
|
r-phenogeneranker
|
1.12.0-1 |
0 |
0.00
|
PhenoGeneRanker: A gene and phenotype prioritization tool |
BioArchLinuxBot
|
2024-05-01 23:41 (UTC) |
|
r-phenopath
|
1.28.0-1 |
0 |
0.00
|
Genomic trajectories with heterogeneous genetic and environmental backgrounds |
BioArchLinuxBot
|
2024-05-02 19:44 (UTC) |
|
r-phenotest
|
1.52.0-1 |
0 |
0.00
|
Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2024-05-03 13:09 (UTC) |
|
r-phenstat
|
2.40.0-1 |
0 |
0.00
|
Statistical analysis of phenotypic data |
BioArchLinuxBot
|
2024-05-01 20:40 (UTC) |
|
r-philr
|
1.30.0-1 |
0 |
0.00
|
Phylogenetic partitioning based ILR transform for metagenomics data |
BioArchLinuxBot
|
2024-05-02 01:08 (UTC) |
|
r-plotgardener
|
1.10.0-1 |
0 |
0.00
|
Coordinate-Based Genomic Visualization Package for R |
BioArchLinuxBot
|
2024-05-03 03:31 (UTC) |
|
r-plsgenomics
|
1.5.3-1 |
0 |
0.00
|
PLS Analyses for Genomics |
BioArchLinuxBot
|
2024-03-28 12:02 (UTC) |
|
r-plyranges
|
1.24.0-1 |
0 |
0.00
|
A fluent interface for manipulating GenomicRanges |
BioArchLinuxBot
|
2024-05-03 00:53 (UTC) |
|
r-pogos
|
1.24.0-1 |
0 |
0.00
|
PharmacOGenomics Ontology Support |
BioArchLinuxBot
|
2024-05-03 18:44 (UTC) |
|
r-predictionet
|
1.40.0-4 |
0 |
0.00
|
Inference for predictive networks designed for (but not limited to) genomic data |
BioArchLinuxBot
|
2022-06-07 13:19 (UTC) |