403 packages found. Page 3 of 9.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-expressionatlas 1.32.0-1 0 0.00 Download datasets from EMBL-EBI Expression Atlas BioArchLinuxBot 2024-05-02 19:01 (UTC)
r-monocle 2.32.0-1 0 0.00 Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq BioArchLinuxBot 2024-05-02 12:52 (UTC)
r-affycomp 1.80.0-1 0 0.00 Graphics Toolbox for Assessment of Affymetrix Expression Measures BioArchLinuxBot 2024-05-02 12:45 (UTC)
r-mircomp 1.34.0-1 0 0.00 Tools to assess and compare miRNA expression estimatation methods BioArchLinuxBot 2024-05-02 12:43 (UTC)
r-geneexpressionsignature 1.50.0-1 0 0.00 Gene Expression Signature based Similarity Metric BioArchLinuxBot 2024-05-02 12:43 (UTC)
r-annotationtools 1.78.0-1 0 0.00 Annotate microarrays and perform cross-species gene expression analyses using flat file databases BioArchLinuxBot 2024-05-02 12:37 (UTC)
r-undo 1.46.0-1 0 0.00 Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions BioArchLinuxBot 2024-05-02 12:35 (UTC)
r-plpe 1.64.0-1 0 0.00 Local Pooled Error Test for Differential Expression with Paired High-throughput Data BioArchLinuxBot 2024-05-02 12:34 (UTC)
r-noiseq 2.48.0-1 0 0.00 Exploratory analysis and differential expression for RNA-seq data BioArchLinuxBot 2024-05-02 12:31 (UTC)
r-plgem 1.76.0-1 0 0.00 Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM) BioArchLinuxBot 2024-05-02 12:24 (UTC)
r-variancepartition 1.34.0-1 0 0.00 Quantify and interpret drivers of variation in multilevel gene expression experiments BioArchLinuxBot 2024-05-02 12:21 (UTC)
r-ebarrays 2.68.0-1 0 0.00 Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification BioArchLinuxBot 2024-05-02 12:17 (UTC)
r-compcoder 1.40.0-1 0 0.00 RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods BioArchLinuxBot 2024-05-02 05:50 (UTC)
r-rvisdiff 1.2.0-1 0 0.00 Interactive Graphs for Differential Expression pekkarr 2024-05-02 05:46 (UTC)
r-edger 4.2.0-1 0 0.00 Empirical Analysis of Digital Gene Expression Data in R BioArchLinuxBot 2024-05-02 05:17 (UTC)
r-snagee 1.44.0-1 0 0.00 Signal-to-Noise applied to Gene Expression Experiments BioArchLinuxBot 2024-05-02 05:14 (UTC)
r-ebseq 2.2.0-1 0 0.00 An R package for gene and isoform differential expression analysis of RNA-seq data BioArchLinuxBot 2024-05-02 04:46 (UTC)
r-diffgeneanalysis 1.86.0-1 0 0.00 Performs differential gene expression Analysis BioArchLinuxBot 2024-05-02 04:37 (UTC)
r-targetscore 1.42.0-1 0 0.00 Infer microRNA targets using microRNA-overexpression data and sequence information BioArchLinuxBot 2024-05-02 04:36 (UTC)
r-antiprofiles 1.44.0-1 0 0.00 Implementation of gene expression anti-profiles BioArchLinuxBot 2024-05-02 04:31 (UTC)
r-pickgene 1.76.0-1 0 0.00 Adaptive Gene Picking for Microarray Expression Data Analysis BioArchLinuxBot 2024-05-02 04:10 (UTC)
r-mirnapath 1.64.0-1 0 0.00 Pathway Enrichment for miRNA Expression Data BioArchLinuxBot 2024-05-02 04:00 (UTC)
r-isolde 1.32.0-1 0 0.00 Integrative Statistics of alleLe Dependent Expression BioArchLinuxBot 2024-05-02 04:00 (UTC)
r-bader 1.42.0-1 0 0.00 Bayesian Analysis of Differential Expression in RNA Sequencing Data BioArchLinuxBot 2024-05-02 03:52 (UTC)
r-kboost 1.12.0-1 0 0.00 Inference of gene regulatory networks from gene expression data BioArchLinuxBot 2024-05-02 03:34 (UTC)
r-agilp 3.36.0-1 0 0.00 Agilent expression array processing package BioArchLinuxBot 2024-05-02 03:34 (UTC)
r-scbn 1.22.0-1 0 0.00 A statistical normalization method and differential expression analysis for RNA-seq data between different species BioArchLinuxBot 2024-05-02 03:14 (UTC)
r-amountain 1.30.0-1 0 0.00 Active modules for multilayer weighted gene co-expression networks: a continuous optimization approach BioArchLinuxBot 2024-05-02 03:12 (UTC)
r-xde 2.50.0-1 0 0.00 XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression BioArchLinuxBot 2024-05-02 02:50 (UTC)
r-trigger 1.50.0-1 0 0.00 Transcriptional Regulatory Inference from Genetics of Gene ExpRession BioArchLinuxBot 2024-05-02 02:44 (UTC)
r-dexma 1.12.0-1 0 0.00 Differential Expression Meta-Analysis BioArchLinuxBot 2024-05-02 02:42 (UTC)
r-edge 2.36.0-1 0 0.00 Extraction of Differential Gene Expression BioArchLinuxBot 2024-05-02 02:40 (UTC)
r-gep2pep 1.24.0-1 0 0.00 Creation and Analysis of Pathway Expression Profiles (PEPs) BioArchLinuxBot 2024-05-02 02:33 (UTC)
r-agdex 1.52.0-1 0 0.00 Agreement of Differential Expression Analysis BioArchLinuxBot 2024-05-02 02:32 (UTC)
r-geodiff 1.10.0-1 0 0.00 Count model based differential expression and normalization on GeoMx RNA data BioArchLinuxBot 2024-05-02 02:28 (UTC)
r-ctrap 1.22.0-1 0 0.00 Identification of candidate causal perturbations from differential gene expression data BioArchLinuxBot 2024-05-02 02:18 (UTC)
r-peca 1.40.0-1 0 0.00 Probe-level Expression Change Averaging BioArchLinuxBot 2024-05-02 02:11 (UTC)
r-tigre 1.58.0-1 0 0.00 Transcription factor Inference through Gaussian process Reconstruction of Expression BioArchLinuxBot 2024-05-02 02:06 (UTC)
r-mgfm 1.38.0-1 0 0.00 Marker Gene Finder in Microarray gene expression data BioArchLinuxBot 2024-05-02 02:05 (UTC)
r-esetvis 1.30.0-1 0 0.00 Visualizations of expressionSet Bioconductor object BioArchLinuxBot 2024-05-02 02:02 (UTC)
r-nempi 1.12.0-1 0 0.00 Inferring unobserved perturbations from gene expression data BioArchLinuxBot 2024-05-02 02:01 (UTC)
r-bgx 1.70.0-1 0 0.00 Bayesian Gene eXpression BioArchLinuxBot 2024-05-02 01:48 (UTC)
r-mirage 1.46.0-1 0 0.00 MiRNA Ranking by Gene Expression BioArchLinuxBot 2024-05-02 01:34 (UTC)
r-safe 3.44.0-1 0 0.00 Significance Analysis of Function and Expression BioArchLinuxBot 2024-05-02 01:31 (UTC)
r-clusterseq 1.28.0-1 0 0.00 Clustering of high-throughput sequencing data by identifying co-expression patterns BioArchLinuxBot 2024-05-02 00:46 (UTC)
r-gsgalgor 1.14.0-1 0 0.00 An Evolutionary Framework for the Identification and Study of Prognostic Gene Expression Signatures in Cancer BioArchLinuxBot 2024-05-01 23:42 (UTC)
r-erccdashboard 1.38.0-1 0 0.00 Assess Differential Gene Expression Experiments with ERCC Controls BioArchLinuxBot 2024-05-01 23:26 (UTC)
r-cycle 1.58.0-1 0 0.00 Significance of periodic expression pattern in time-series data BioArchLinuxBot 2024-05-01 22:56 (UTC)
r-tmixclust 1.26.0-1 0 0.00 Time Series Clustering of Gene Expression with Gaussian Mixed-Effects Models and Smoothing Splines BioArchLinuxBot 2024-05-01 22:56 (UTC)
r-scde 2.32.0-1 0 0.00 Single Cell Differential Expression BioArchLinuxBot 2024-05-01 22:45 (UTC)

403 packages found. Page 3 of 9.

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