340 packages found. Page 4 of 7.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-sgcp 1.2.0-4 0 0.00 A semi-supervised pipeline for gene clustering using self-training approach in gene co-expression networks pekkarr 2024-04-28 20:21 (UTC)
r-scpipe 2.4.0-1 0 0.00 pipeline for single cell RNA-seq data analysis BioArchLinuxBot 2024-05-03 01:58 (UTC)
r-rstatix 0.7.2-1 1 0.00 Pipe-Friendly Framework for Basic Statistical Tests BioArchLinuxBot 2023-02-02 00:05 (UTC)
r-rnaseqcomp 1.34.0-1 0 0.00 Benchmarks for RNA-seq Quantification Pipelines BioArchLinuxBot 2024-05-02 04:26 (UTC)
r-rcwlpipelines 1.20.0-1 0 0.00 Bioinformatics pipelines based on Rcwl BioArchLinuxBot 2024-05-02 01:58 (UTC)
r-rcgh 1.34.0-1 0 0.00 Comprehensive Pipeline for Analyzing and Visualizing Array-Based CGH Data BioArchLinuxBot 2024-05-03 02:55 (UTC)
r-ramwas 1.28.0-1 0 0.00 Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms BioArchLinuxBot 2024-05-02 23:47 (UTC)
r-pipeframe 1.20.0-1 0 0.00 Pipeline framework for bioinformatics in R BioArchLinuxBot 2024-05-03 03:09 (UTC)
r-pipecomp 1.14.0-1 0 0.00 pipeComp pipeline benchmarking framework BioArchLinuxBot 2024-05-03 01:46 (UTC)
r-oscope 1.34.0-1 0 0.00 Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq BioArchLinuxBot 2024-05-01 19:49 (UTC)
r-opencyto 2.16.0-1 0 0.00 Hierarchical Gating Pipeline for flow cytometry data BioArchLinuxBot 2024-05-01 23:11 (UTC)
r-nanotube 1.10.0-1 0 0.00 An Easy Pipeline for NanoString nCounter Data Analysis BioArchLinuxBot 2024-05-02 02:21 (UTC)
r-mwastools 1.28.0-1 0 0.00 MWASTools: an integrated pipeline to perform metabolome-wide association studies BioArchLinuxBot 2024-05-02 20:29 (UTC)
r-modelr 0.1.11-5 0 0.00 Modelling Functions that Work with the Pipe pekkarr 2024-04-25 19:04 (UTC)
r-mmuphin 1.18.0-1 0 0.00 Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies BioArchLinuxBot 2024-05-02 00:59 (UTC)
r-mmappr2 1.10.0-4 0 0.00 Mutation Mapping Analysis Pipeline for Pooled RNA-Seq BioArchLinuxBot 2022-11-04 06:36 (UTC)
r-methylpipe 1.36.0-1 0 0.00 Base resolution DNA methylation data analysis BioArchLinuxBot 2023-10-27 15:02 (UTC)
r-metams 1.38.0-1 0 0.00 MS-based metabolomics annotation pipeline BioArchLinuxBot 2023-10-28 15:35 (UTC)
r-mageckflute 2.6.0-1 0 0.00 Integrative Analysis Pipeline for Pooled CRISPR Functional Genetic Screens BioArchLinuxBot 2023-11-02 12:14 (UTC)
r-knowseq 1.18.0-1 0 0.00 KnowSeq R/Bioc package: The Smart Transcriptomic Pipeline BioArchLinuxBot 2024-05-02 02:43 (UTC)
r-kableextra 1.4.0-1 0 0.00 Construct Complex Table with 'kable' and Pipe Syntax BioArchLinuxBot 2024-01-24 18:05 (UTC)
r-ipath 1.10.0-1 0 0.00 iPath pipeline for detecting perturbed pathways at individual level BioArchLinuxBot 2024-05-01 21:12 (UTC)
r-immunoclust 1.36.0-1 0 0.00 immunoClust - Automated Pipeline for Population Detection in Flow Cytometry BioArchLinuxBot 2024-05-01 19:56 (UTC)
r-icheck 1.32.0-1 0 0.00 QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data BioArchLinuxBot 2023-10-27 15:40 (UTC)
r-htseqgenie 4.32.0-1 0 0.00 A NGS analysis pipeline. BioArchLinuxBot 2023-10-27 14:01 (UTC)
r-gwena 1.14.0-1 0 0.00 Pipeline for augmented co-expression analysis BioArchLinuxBot 2024-05-02 20:52 (UTC)
r-guideseq 1.32.0-1 0 0.00 GUIDE-seq analysis pipeline BioArchLinuxBot 2023-10-27 14:22 (UTC)
r-grohmm 1.38.0-1 0 0.00 GRO-seq Analysis Pipeline BioArchLinuxBot 2024-05-03 00:56 (UTC)
r-esatac 1.24.0-1 0 0.00 An Easy-to-use Systematic pipeline for ATACseq data analysis BioArchLinuxBot 2023-11-01 12:57 (UTC)
r-doscheda 1.26.0-1 0 0.00 A DownStream Chemo-Proteomics Analysis Pipeline BioArchLinuxBot 2024-05-02 00:50 (UTC)
r-cytopipelinegui 1.0.0-1 0 0.00 GUI's for visualization of flow cytometry data analysis pipelines pekkarr 2023-11-20 13:45 (UTC)
r-cytopipeline 1.2.0-1 0 0.00 Automation and visualization of flow cytometry data analysis pipelines pekkarr 2023-11-02 12:16 (UTC)
r-cssq 1.16.0-1 0 0.00 Chip-seq Signal Quantifier Pipeline BioArchLinuxBot 2024-05-03 02:31 (UTC)
r-cohcapanno 1.39.0-1 0 0.00 Annotations for City of Hope CpG Island Analysis Pipeline BioArchLinuxBot 2024-05-02 04:09 (UTC)
r-cohcap 1.48.0-2 0 0.00 CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data BioArchLinuxBot 2024-04-25 05:25 (UTC)
r-chic 1.19.0-3 0 0.00 Quality Control Pipeline for ChIP-Seq Data BioArchLinuxBot 2023-10-28 15:09 (UTC)
r-champ 2.32.0-1 0 0.00 Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC BioArchLinuxBot 2023-12-07 00:08 (UTC)
r-bumhmm 1.28.0-1 0 0.00 Computational pipeline for computing probability of modification from structure probing experiment data BioArchLinuxBot 2024-05-02 19:12 (UTC)
qtmips 0.7.5-1 0 0.00 MIPS CPU simulator for education purposes with pipeline and cache visualization sobotkama 2021-02-17 10:36 (UTC)
qtl-seq 2.2.4-1 0 0.00 Pipeline for bulk segregant analysis. https://doi.org/10.7717/peerj.13170 kbipinkumar 2023-09-13 00:03 (UTC)
qpwgraph-git 0.6.0.r4.g1665d36-1 0 0.00 PipeWire Graph Qt GUI Interface (git version) NullBite 2023-11-26 18:43 (UTC)
python-wyoming-piper 1.5.0-1 0 0.00 Wyoming Server for Piper AUR-user 2024-02-26 22:04 (UTC)
python-spacy-entity-linker 1.0-1 0 0.00 Linked Entity Pipeline for spaCy ynerant 2022-01-20 20:51 (UTC)
python-sklearn-onnx 1.16.0-2 0 0.00 Convert scikit-learn models and pipelines to ONNX hottea 2024-04-27 13:17 (UTC)
python-sarge 0.1.6-1 2 0.00 The sarge package provides a wrapper for subprocess which provides command pipeline functionality. pa314159 2022-09-26 15:23 (UTC)
python-ruffus 2.8.4-2 10 0.00 Lightweight Python library for computational pipelines orphan 2022-05-05 03:40 (UTC)
python-pypeln 0.1.6-1 0 0.00 A simple yet powerful python library for creating concurrent data pipelines. orphan 2019-03-09 09:45 (UTC)
python-polyglot 16.7.4-5 0 0.00 A natural language pipeline that supports massive multilingual applications adrien1018 2022-02-14 06:24 (UTC)
python-pipenv-git 2023.9.1.r4.g76edf74f-1 1 0.00 Python Development Workflow for Humans. ilai 2023-09-06 20:49 (UTC)
python-pandera-git 0.19.0b0+5.r668.20240323.645f5e57-1 0 0.00 Provides a flexible and expressive API for performing data validation on dataframe-like objects to make data processing pipelines more readable and robust. dreieck 2024-03-24 15:55 (UTC)

340 packages found. Page 4 of 7.

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