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r-plpe
|
1.62.0-2 |
0 |
0.00
|
Local Pooled Error Test for Differential Expression with Paired High-throughput Data |
BioArchLinuxBot
|
2024-04-18 18:35 (UTC) |
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r-phenotest
|
1.50.0-1 |
0 |
0.00
|
Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2023-10-26 06:45 (UTC) |
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r-path2ppi
|
1.32.0-1 |
0 |
0.00
|
Prediction of pathway-related protein-protein interaction networks |
BioArchLinuxBot
|
2023-10-25 23:55 (UTC) |
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r-panr
|
1.48.0-1 |
0 |
0.00
|
Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations |
BioArchLinuxBot
|
2023-10-26 01:23 (UTC) |
|
r-pan
|
1.9-3 |
0 |
0.00
|
Multiple Imputation for Multivariate Panel or Clustered Data |
pekkarr
|
2024-04-24 20:20 (UTC) |
|
r-pamr
|
1.56.2-1 |
0 |
0.00
|
Pam: Prediction Analysis for Microarrays |
BioArchLinuxBot
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2024-04-20 12:02 (UTC) |
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r-pairedgsea
|
1.2.0-1 |
0 |
0.00
|
Paired DGE and DGS analysis for gene set enrichment analysis |
pekkarr
|
2023-11-09 11:42 (UTC) |
|
r-paireddata
|
1.1.1-4 |
0 |
0.00
|
Paired Data Analysis |
BioArchLinuxBot
|
2022-06-06 09:51 (UTC) |
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r-pairadise
|
1.18.0-1 |
0 |
0.00
|
PAIRADISE: Paired analysis of differential isoform expression |
BioArchLinuxBot
|
2023-10-27 06:30 (UTC) |
|
r-orfhunter
|
1.10.0-1 |
0 |
0.00
|
Predict open reading frames in nucleotide sequences |
BioArchLinuxBot
|
2023-10-27 11:35 (UTC) |
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r-orderedlist
|
1.74.0-1 |
0 |
0.00
|
Similarities of Ordered Gene Lists |
BioArchLinuxBot
|
2023-10-26 00:50 (UTC) |
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r-optparse
|
1.7.3-1 |
0 |
0.00
|
R command line parser inspired by Python's 'optparse' |
nobodyinperson
|
2023-06-15 07:37 (UTC) |
|
r-nupop
|
2.10.0-2 |
0 |
0.00
|
An R package for nucleosome positioning prediction |
BioArchLinuxBot
|
2024-04-05 18:11 (UTC) |
|
r-nucpos
|
1.20.0-2 |
0 |
0.00
|
An R package for prediction of nucleosome positions |
BioArchLinuxBot
|
2024-04-05 18:03 (UTC) |
|
r-ntw
|
1.52.0-2 |
0 |
0.00
|
Predict gene network using an Ordinary Differential Equation (ODE) based method |
BioArchLinuxBot
|
2024-04-07 18:05 (UTC) |
|
r-netactivitydata
|
1.4.0-3 |
0 |
0.00
|
Data required for getting the gene set scores with NetActivity package |
pekkarr
|
2024-04-24 22:41 (UTC) |
|
r-multcompview
|
0.1.10-1 |
0 |
0.00
|
Visualizations of Paired Comparisons |
BioArchLinuxBot
|
2024-03-08 06:01 (UTC) |
|
r-mstate
|
0.3.2-3 |
0 |
0.00
|
Data Preparation, Estimation and Prediction in Multi-State Models |
pekkarr
|
2024-04-25 00:29 (UTC) |
|
r-mslp
|
1.4.0-3 |
0 |
0.00
|
Predict synthetic lethal partners of tumour mutations |
pekkarr
|
2024-04-26 16:18 (UTC) |
|
r-mrmre
|
2.1.2.1-1 |
0 |
0.00
|
Parallelized Minimum Redundancy, Maximum Relevance (mRMR) |
BioArchLinuxBot
|
2023-04-25 06:01 (UTC) |
|
r-mousefm
|
1.12.0-1 |
0 |
0.00
|
In-silico methods for genetic finemapping in inbred mice |
BioArchLinuxBot
|
2023-10-26 04:43 (UTC) |
|
r-motifbreakr
|
2.16.0-1 |
0 |
0.00
|
A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites |
BioArchLinuxBot
|
2023-10-27 15:06 (UTC) |
|
r-mirnatap
|
1.36.0-1 |
0 |
0.00
|
miRNAtap: microRNA Targets - Aggregated Predictions |
BioArchLinuxBot
|
2023-10-26 04:10 (UTC) |
|
r-metbrewer
|
0.2.0-1 |
0 |
0.00
|
Color Palettes Inspired by Works at the Metropolitan Museum of Art |
BioArchLinuxBot
|
2022-06-06 07:18 (UTC) |
|
r-matchbox
|
1.44.0-2 |
0 |
0.00
|
Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis |
BioArchLinuxBot
|
2024-03-29 18:08 (UTC) |
|
r-mapredictdsc
|
1.40.0-1 |
0 |
0.00
|
Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge |
BioArchLinuxBot
|
2023-10-26 06:36 (UTC) |
|
r-macpet
|
1.15.1-4 |
0 |
0.00
|
Model based analysis for paired-end data |
BioArchLinuxBot
|
2022-11-04 06:14 (UTC) |
|
r-lungcanceracvssccgeo
|
1.38.0-2 |
0 |
0.00
|
A lung cancer dataset that can be used with maPredictDSC package for developing outcome prediction models from Affymetrix CEL files |
BioArchLinuxBot
|
2024-03-08 18:10 (UTC) |
|
r-logistf
|
1.26.0-1 |
0 |
0.00
|
Firth's Bias-Reduced Logistic Regression |
BioArchLinuxBot
|
2023-08-18 12:01 (UTC) |
|
r-liblinear
|
2.10.23-2 |
0 |
0.00
|
Linear Predictive Models Based on the LIBLINEAR C/C++ Library |
BioArchLinuxBot
|
2024-03-07 12:10 (UTC) |
|
r-lgr
|
0.4.4-3 |
0 |
0.00
|
A Fully Featured Logging Framework |
BioArchLinuxBot
|
2024-04-10 12:04 (UTC) |
|
r-ledpred
|
1.36.0-1 |
0 |
0.00
|
Learning from DNA to Predict Enhancers |
BioArchLinuxBot
|
2023-10-25 20:53 (UTC) |
|
r-lassopv
|
0.2.0-7 |
0 |
0.00
|
Nonparametric P-Value Estimation for Predictors in Lasso |
BioArchLinuxBot
|
2024-04-11 18:09 (UTC) |
|
r-kinswingr
|
1.20.0-1 |
0 |
0.00
|
KinSwingR: network-based kinase activity prediction |
BioArchLinuxBot
|
2023-10-25 22:13 (UTC) |
|
r-keggandmetacoredzpathwaysgeo
|
1.22.0-2 |
0 |
0.00
|
Disease Datasets from GEO |
BioArchLinuxBot
|
2024-04-18 18:32 (UTC) |
|
r-jaspsurvival
|
0.18.3-1 |
0 |
0.00
|
A Survival analysis module required by JASP |
BioArchLinuxBot
|
2024-01-12 12:13 (UTC) |
|
r-jaspprocess
|
0.18.3-1 |
0 |
0.00
|
Process Module required by JASP |
BioArchLinuxBot
|
2024-01-12 12:21 (UTC) |
|
r-ipred
|
0.9.14-1 |
0 |
0.00
|
Improved Predictors |
BioArchLinuxBot
|
2023-03-09 18:04 (UTC) |
|
r-invariantcausalprediction
|
0.8-4 |
0 |
0.00
|
Invariant Causal Prediction |
BioArchLinuxBot
|
2022-06-06 05:05 (UTC) |
|
r-intramirexplorer
|
1.24.0-1 |
0 |
0.00
|
Predicting Targets for Drosophila Intragenic miRNAs |
BioArchLinuxBot
|
2023-10-26 01:24 (UTC) |
|
r-interminer
|
1.24.0-1 |
0 |
0.00
|
R Interface with InterMine-Powered Databases |
BioArchLinuxBot
|
2023-10-28 12:16 (UTC) |
|
r-ingredients
|
2.3.0-3 |
0 |
0.00
|
Effects and Importances of Model Ingredients |
pekkarr
|
2024-04-25 12:24 (UTC) |
|
r-imputelcmd
|
2.1-1 |
0 |
0.00
|
A collection of methods for left-censored missing data imputation |
BioArchLinuxBot
|
2022-06-10 12:03 (UTC) |
|
r-idpr
|
1.12.0-1 |
0 |
0.00
|
Profiling and Analyzing Intrinsically Disordered Proteins in R |
BioArchLinuxBot
|
2023-10-26 02:41 (UTC) |
|
r-icens
|
1.74.0-2 |
0 |
0.00
|
NPMLE for Censored and Truncated Data |
BioArchLinuxBot
|
2024-03-14 18:07 (UTC) |
|
r-hpip
|
1.8.0-1 |
0 |
0.00
|
Host-Pathogen Interaction Prediction |
BioArchLinuxBot
|
2023-10-26 01:10 (UTC) |
|
r-hopach
|
2.62.0-2 |
0 |
0.00
|
Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH) |
BioArchLinuxBot
|
2024-04-18 18:44 (UTC) |
|
r-hmmcopy
|
1.44.0-2 |
0 |
0.00
|
Copy number prediction with correction for GC and mappability bias for HTS data |
BioArchLinuxBot
|
2024-04-06 18:06 (UTC) |
|
r-hiergwas
|
1.32.0-1 |
0 |
0.00
|
Asessing statistical significance in predictive GWA studies |
BioArchLinuxBot
|
2023-10-25 20:34 (UTC) |
|
r-heatplus
|
3.10.0-2 |
0 |
0.00
|
Heatmaps with row and/or column covariates and colored clusters |
BioArchLinuxBot
|
2024-04-07 12:04 (UTC) |