172 packages found. Page 2 of 4.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-scclassifr 1.2.0-3 0 0.00 Pretrained learning models for cell type prediction on single cell RNA-sequencing data BioArchLinuxBot 2022-06-07 13:21 (UTC)
r-scbubbletree 1.6.0-1 0 0.00 Quantitative visual exploration of scRNA-seq data pekkarr 2024-05-02 05:55 (UTC)
r-scbn 1.22.0-1 0 0.00 A statistical normalization method and differential expression analysis for RNA-seq data between different species BioArchLinuxBot 2024-05-02 03:14 (UTC)
r-scbfa 1.18.0-1 0 0.00 A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq BioArchLinuxBot 2024-05-03 13:39 (UTC)
r-scarray.sat 1.4.0-1 0 0.00 Large-scale single-cell RNA-seq data analysis using GDS files and Seurat pekkarr 2024-05-03 00:09 (UTC)
r-scarray 1.12.0-1 0 0.00 Large-scale single-cell RNA-seq data manipulation with GDS files BioArchLinuxBot 2024-05-02 21:20 (UTC)
r-scannotatr 1.10.0-1 0 0.00 Pretrained learning models for cell type prediction on single cell RNA-sequencing data BioArchLinuxBot 2024-05-02 23:57 (UTC)
r-saver 1.1.2-4 0 0.00 Single-Cell RNA-Seq Gene Expression Recovery BioArchLinuxBot 2022-06-06 14:00 (UTC)
r-saturn 1.12.0-1 0 0.00 Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications BioArchLinuxBot 2024-05-02 19:39 (UTC)
r-ruvseq 1.38.0-1 0 0.00 Remove Unwanted Variation from RNA-Seq Data BioArchLinuxBot 2024-05-03 04:15 (UTC)
r-roseq 1.16.0-1 0 0.00 Modeling expression ranks for noise-tolerant differential expression analysis of scRNA-Seq data BioArchLinuxBot 2024-05-01 18:58 (UTC)
r-roar 1.40.0-1 0 0.00 Identify differential APA usage from RNA-seq alignments BioArchLinuxBot 2024-05-03 00:55 (UTC)
r-rnaseqr 1.16.0-4 0 0.00 RNASeqR: an R package for automated two-group RNA-Seq analysis workflow BioArchLinuxBot 2023-04-29 08:38 (UTC)
r-rnaseqcomp 1.34.0-1 0 0.00 Benchmarks for RNA-seq Quantification Pipelines BioArchLinuxBot 2024-05-02 04:26 (UTC)
r-rnasense 1.18.0-1 0 0.00 Analysis of Time-Resolved RNA-Seq Data BioArchLinuxBot 2024-05-02 19:49 (UTC)
r-rmmquant 1.22.0-1 0 0.00 RNA-Seq multi-mapping Reads Quantification Tool BioArchLinuxBot 2024-05-03 02:46 (UTC)
r-rbm 1.36.0-1 0 0.00 RBM: a R package for microarray and RNA-Seq data analysis BioArchLinuxBot 2024-05-01 22:51 (UTC)
r-quantiseqr 1.12.0-1 0 0.00 Quantification of the Tumor Immune contexture from RNA-seq data BioArchLinuxBot 2024-05-02 20:01 (UTC)
r-proactiv 1.14.0-1 0 0.00 Estimate Promoter Activity from RNA-Seq data BioArchLinuxBot 2024-05-08 18:03 (UTC)
r-prebs 1.44.0-1 0 0.00 Probe region expression estimation for RNA-seq data for improved microarray comparability BioArchLinuxBot 2024-05-02 23:49 (UTC)
r-pram 1.20.0-1 0 0.00 Pooling RNA-seq datasets for assembling transcript models BioArchLinuxBot 2024-05-03 01:01 (UTC)
r-powsc 1.12.0-1 0 0.00 Simulation, power evaluation, and sample size recommendation for single cell RNA-seq BioArchLinuxBot 2024-05-03 00:15 (UTC)
r-polyester 1.39.0-1 0 0.00 Simulate RNA-seq reads BioArchLinuxBot 2024-05-02 00:19 (UTC)
r-phantasuslite 1.2.0-1 0 0.00 Loading and annotation RNA-seq counts matrices pekkarr 2024-05-08 18:03 (UTC)
r-peco 1.16.0-1 0 0.00 A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data BioArchLinuxBot 2024-05-03 01:51 (UTC)
r-pcaexplorer 2.30.0-1 0 0.00 Interactive Visualization of RNA-seq Data Using a Principal Components Approach BioArchLinuxBot 2024-05-03 14:35 (UTC)
r-pasilla 1.32.0-1 0 0.00 Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. BioArchLinuxBot 2024-05-03 13:45 (UTC)
r-partcnv 1.2.0-1 0 0.00 Infer locally aneuploid cells using single cell RNA-seq data pekkarr 2024-05-03 00:04 (UTC)
r-outrider 1.22.0-1 0 0.00 OUTlier in RNA-Seq fInDER BioArchLinuxBot 2024-05-04 12:16 (UTC)
r-oscope 1.34.0-1 0 0.00 Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq BioArchLinuxBot 2024-05-01 19:49 (UTC)
r-noiseq 2.48.0-1 0 0.00 Exploratory analysis and differential expression for RNA-seq data BioArchLinuxBot 2024-05-02 12:31 (UTC)
r-newwave 1.14.0-1 0 0.00 Negative binomial model for scRNA-seq BioArchLinuxBot 2024-05-02 21:39 (UTC)
r-nbpseq 0.3.1-1 0 0.00 Negative Binomial Models for RNA-Sequencing Data BioArchLinuxBot 2022-06-09 13:04 (UTC)
r-nbamseq 1.20.0-1 0 0.00 Negative Binomial Additive Model for RNA-Seq Data BioArchLinuxBot 2024-05-03 13:00 (UTC)
r-muscat 1.18.0-1 0 0.00 Multi-sample multi-group scRNA-seq data analysis tools BioArchLinuxBot 2024-05-03 01:47 (UTC)
r-multirnaflow 1.2.0-1 0 0.00 An R package for integrated analysis of temporal RNA-seq data with multiple biological conditions pekkarr 2024-05-10 12:33 (UTC)
r-monocle 2.32.0-1 0 0.00 Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq BioArchLinuxBot 2024-05-02 12:52 (UTC)
r-mmappr2 1.10.0-4 0 0.00 Mutation Mapping Analysis Pipeline for Pooled RNA-Seq BioArchLinuxBot 2022-11-04 06:36 (UTC)
r-mlseq 2.22.0-1 0 0.00 Machine Learning Interface for RNA-Seq Data BioArchLinuxBot 2024-05-02 22:06 (UTC)
r-mitoclone2 1.10.0-1 0 0.00 Clonal Population Identification in Single-Cell RNA-Seq Data using Mitochondrial and Somatic Mutations BioArchLinuxBot 2024-05-03 05:45 (UTC)
r-mirmine 1.24.0-1 0 0.00 Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment BioArchLinuxBot 2024-04-13 18:03 (UTC)
r-miqc 1.12.0-1 0 0.00 Flexible, probabilistic metrics for quality control of scRNA-seq data BioArchLinuxBot 2024-05-02 21:24 (UTC)
r-mgfr 1.30.0-1 0 0.00 Marker Gene Finder in RNA-seq data BioArchLinuxBot 2024-05-03 12:09 (UTC)
r-metaseqr2 1.16.0-1 0 0.00 An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms BioArchLinuxBot 2024-05-07 12:12 (UTC)
r-metaseq 1.44.0-1 0 0.00 Meta-analysis of RNA-Seq count data in multiple studies BioArchLinuxBot 2024-05-01 18:42 (UTC)
r-meb 1.18.0-1 0 0.00 A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq data BioArchLinuxBot 2024-05-03 01:39 (UTC)
r-mbkmeans 1.20.0-1 0 0.00 Mini-batch K-means Clustering for Single-Cell RNA-seq BioArchLinuxBot 2024-05-02 21:22 (UTC)
r-lineagepulse 1.21.0-1 0 0.00 Differential expression analysis and model fitting for single-cell RNA-seq data BioArchLinuxBot 2023-10-27 07:57 (UTC)
r-kissde 1.24.0-1 0 0.00 Retrieves Condition-Specific Variants in RNA-Seq Data BioArchLinuxBot 2024-05-03 05:36 (UTC)
r-isomirs 1.32.1-1 0 0.00 Analyze isomiRs and miRNAs from small RNA-seq BioArchLinuxBot 2024-05-07 18:05 (UTC)

172 packages found. Page 2 of 4.

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