5504 packages found. Page 6 of 111.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-cleanupdtseq 1.42.0-1 0 0.00 cleanUpdTSeq cleans up artifacts from polyadenylation sites from oligo(dT)-mediated 3' end RNA sequending data BioArchLinuxBot 2024-05-03 03:28 (UTC)
r-motif2site 1.8.0-1 0 0.00 Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions pekkarr 2024-05-03 03:20 (UTC)
quakeinjector alpha06-1 2 0.00 Download, install and play quake singleplayer maps from the quaddicted.com archive bilgin 2024-05-03 03:18 (UTC)
r-methrix 1.18.0-1 0 0.00 Fast and efficient summarization of generic bedGraph files from Bisufite sequencing BioArchLinuxBot 2024-05-03 03:15 (UTC)
r-genomicinteractionnodes 1.8.0-1 0 0.00 A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data pekkarr 2024-05-03 02:50 (UTC)
r-sgseq 1.38.0-1 0 0.00 Splice event prediction and quantification from RNA-seq data BioArchLinuxBot 2024-05-03 02:29 (UTC)
r-chipxpress 1.48.0-1 0 0.00 ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles BioArchLinuxBot 2024-05-03 02:15 (UTC)
r-prince 1.20.0-1 0 0.00 Predicting Interactomes from Co-Elution BioArchLinuxBot 2024-05-03 02:04 (UTC)
podman-desktop 1.10.2-1 4 0.01 Manage Podman and other container engines from a single UI and tray. ZhangHua 2024-05-03 02:00 (UTC)
r-chromscape 1.14.0-1 0 0.00 Analysis of single-cell epigenomics datasets with a Shiny App BioArchLinuxBot 2024-05-03 02:00 (UTC)
r-scvir 1.4.0-1 0 0.00 experimental inferface from R to scvi-tools pekkarr 2024-05-03 01:55 (UTC)
spring-tool-suite 4.22.1-1 27 0.32 The Spring Tool Suite (STS) from SpringSource. Musikolo 2024-05-03 01:51 (UTC)
r-msimpute 1.14.0-1 0 0.00 Imputation of label-free mass spectrometry peptides BioArchLinuxBot 2024-05-03 01:35 (UTC)
r-segmentseq 2.38.0-1 0 0.00 Methods for identifying small RNA loci from high-throughput sequencing data BioArchLinuxBot 2024-05-03 01:26 (UTC)
r-rifi 1.8.0-1 0 0.00 'rifi' analyses data from rifampicin time series created by microarray or RNAseq pekkarr 2024-05-03 01:18 (UTC)
r-rificomparative 1.4.0-1 0 0.00 'rifiComparative' compares the output of rifi from two different conditions pekkarr 2024-05-03 01:17 (UTC)
r-sevenc 1.24.0-1 0 0.00 Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs BioArchLinuxBot 2024-05-03 01:14 (UTC)
r-r3cseq 1.50.0-1 0 0.00 Analysis of Chromosome Conformation Capture and Next-generation Sequencing (3C-seq) BioArchLinuxBot 2024-05-03 01:05 (UTC)
r-recount3 1.14.0-1 0 0.00 Explore and download data from the recount3 project BioArchLinuxBot 2024-05-03 01:04 (UTC)
r-hitc 1.48.0-1 0 0.00 High Throughput Chromosome Conformation Capture analysis BioArchLinuxBot 2024-05-03 00:59 (UTC)
r-methylkit 1.30.0-1 0 0.00 DNA methylation analysis from high-throughput bisulfite sequencing results BioArchLinuxBot 2024-05-03 00:57 (UTC)
r-roar 1.40.0-1 0 0.00 Identify differential APA usage from RNA-seq alignments BioArchLinuxBot 2024-05-03 00:55 (UTC)
r-wiggleplotr 1.28.0-1 0 0.00 Make read coverage plots from BigWig files BioArchLinuxBot 2024-05-03 00:54 (UTC)
r-biosigner 1.32.0-1 0 0.00 Signature discovery from omics data BioArchLinuxBot 2024-05-03 00:34 (UTC)
r-msnbase 2.30.1-1 0 0.00 Base Functions and Classes for Mass Spectrometry and Proteomics BioArchLinuxBot 2024-05-03 00:19 (UTC)
r-infercnv 1.20.0-1 0 0.00 Infer Copy Number Variation from Single-Cell RNA-Seq Data BioArchLinuxBot 2024-05-02 23:54 (UTC)
r-single 1.7.0-1 0 0.00 Accurate consensus sequence from nanopore reads of a gene library pekkarr 2024-05-02 23:50 (UTC)
r-chromstar 1.30.0-1 0 0.00 Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data BioArchLinuxBot 2024-05-02 23:41 (UTC)
r-bgeedb 2.30.0-1 0 0.00 Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology BioArchLinuxBot 2024-05-02 23:25 (UTC)
transifex-client 1.6.11-3 31 0.00 The Transifex command-line tool to download and upload translations from Transifex dbrgn 2024-05-02 23:18 (UTC)
r-chromplot 1.32.0-1 0 0.00 Global visualization tool of genomic data BioArchLinuxBot 2024-05-02 23:12 (UTC)
r-vegamc 3.42.0-1 0 0.00 VegaMC: A Package Implementing a Variational Piecewise Smooth Model for Identification of Driver Chromosomal Imbalances in Cancer BioArchLinuxBot 2024-05-02 23:04 (UTC)
google-chrome-beta 125.0.6422.26-1 354 0.21 The popular web browser by Google (Beta Channel) gromit 2024-05-02 22:54 (UTC)
r-netactivity 1.6.0-1 0 0.00 Compute gene set scores from a deep learning framework pekkarr 2024-05-02 22:49 (UTC)
r-qfeatures 1.14.0-1 0 0.00 Quantitative features for mass spectrometry data BioArchLinuxBot 2024-05-02 22:22 (UTC)
r-scgps 1.18.0-1 0 0.00 A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation) BioArchLinuxBot 2024-05-02 22:18 (UTC)
r-genetonic 2.8.0-1 0 0.00 Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis BioArchLinuxBot 2024-05-02 22:16 (UTC)
r-deltacapturec 1.18.0-1 0 0.00 This Package Discovers Meso-scale Chromatin Remodeling from 3C Data BioArchLinuxBot 2024-05-02 22:15 (UTC)
quakeinjector-bin alpha06-1 0 0.00 Download, install and play quake singleplayer maps from the quaddicted.com archive, binary distribution zan 2024-05-02 22:05 (UTC)
r-iloreg 1.14.0-1 0 0.00 a tool for high-resolution cell population identification from scRNA-Seq data BioArchLinuxBot 2024-05-02 22:03 (UTC)
r-scddboost 1.6.0-1 0 0.00 A compositional model to assess expression changes from single-cell rna-seq data pekkarr 2024-05-02 21:56 (UTC)
r-differentialregulation 2.2.0-1 0 0.00 Differentially regulated genes from scRNA-seq data pekkarr 2024-05-02 21:45 (UTC)
r-cfdnakit 1.2.0-1 0 0.00 Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA) pekkarr 2024-05-02 21:16 (UTC)
moodle-dl 2.3.9-1 0 0.00 A Moodle downloader that downloads course content fast from Moodle (eg. lecture pdfs) Rubo 2024-05-02 21:10 (UTC)
r-artms 1.22.0-1 0 0.00 Analytical R tools for Mass Spectrometry BioArchLinuxBot 2024-05-02 21:01 (UTC)
r-msdatahub 1.4.0-1 0 0.00 Mass Spectrometry Data on ExperimentHub pekkarr 2024-05-02 20:41 (UTC)
r-sechm 1.12.0-1 0 0.00 sechm: Complex Heatmaps from a SummarizedExperiment BioArchLinuxBot 2024-05-02 20:26 (UTC)
r-quantiseqr 1.12.0-1 0 0.00 Quantification of the Tumor Immune contexture from RNA-seq data BioArchLinuxBot 2024-05-02 20:01 (UTC)
r-cellscore 1.24.0-1 0 0.00 Tool for Evaluation of Cell Identity from Transcription Profiles BioArchLinuxBot 2024-05-02 19:46 (UTC)
r-proda 1.18.0-1 0 0.00 Differential Abundance Analysis of Label-Free Mass Spectrometry Data BioArchLinuxBot 2024-05-02 19:43 (UTC)

5504 packages found. Page 6 of 111.

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