608 packages found. Page 7 of 13.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-powsc 1.10.0-1 0 0.00 Simulation, power evaluation, and sample size recommendation for single cell RNA-seq BioArchLinuxBot 2023-10-27 09:58 (UTC)
r-pinfsc50 1.3.0-2 0 0.00 Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' BioArchLinuxBot 2024-03-16 18:08 (UTC)
r-phemd 1.18.0-2 0 0.00 Phenotypic EMD for comparison of single-cell samples BioArchLinuxBot 2024-04-28 18:00 (UTC)
r-pasilla 1.30.0-1 0 0.00 Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. BioArchLinuxBot 2023-10-27 10:01 (UTC)
r-outsplice 1.2.0-3 0 0.00 Comparison of Splicing Events between Tumor and Normal Samples pekkarr 2024-04-28 20:28 (UTC)
r-osat 1.50.0-2 0 0.00 Optimal Sample Assignment Tool BioArchLinuxBot 2024-04-05 18:07 (UTC)
r-omixer 1.12.0-1 0 0.00 Omixer: multivariate and reproducible sample randomization to proactively counter batch effects in omics studies BioArchLinuxBot 2023-10-25 20:50 (UTC)
r-omicspca 1.20.0-1 0 0.00 An R package for quantitative integration and analysis of multiple omics assays from heterogeneous samples BioArchLinuxBot 2023-10-27 14:07 (UTC)
r-ocplus 1.76.0-1 0 0.00 Operating characteristics plus sample size and local fdr for microarray experiments BioArchLinuxBot 2023-10-26 00:38 (UTC)
r-netsam 1.42.0-1 0 0.00 Network Seriation And Modularization BioArchLinuxBot 2023-10-26 04:57 (UTC)
r-muscat 1.16.0-1 0 0.00 Multi-sample multi-group scRNA-seq data analysis tools BioArchLinuxBot 2023-10-30 18:41 (UTC)
r-mus 0.1.6-3 0 0.00 Monetary Unit Sampling and Estimation Methods, Widely Used in Auditing pekkarr 2024-04-24 22:36 (UTC)
r-multtest 2.58.0-2 0 0.00 Resampling-based multiple hypothesis testing BioArchLinuxBot 2024-04-18 18:30 (UTC)
r-multibridge 1.2.0-1 0 0.00 Evaluating Multinomial Order Restrictions with Bridge Sampling BioArchLinuxBot 2023-05-12 12:01 (UTC)
r-msstatssamplesize 1.13.0-2 0 0.00 Simulation tool for optimal design of high-dimensional MS-based proteomics experiment BioArchLinuxBot 2024-02-12 12:10 (UTC)
r-mosaics 2.40.0-1 0 0.00 MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq) BioArchLinuxBot 2023-10-27 07:27 (UTC)
r-methylcc 1.16.0-1 0 0.00 Estimate the cell composition of whole blood in DNA methylation samples BioArchLinuxBot 2023-10-27 14:36 (UTC)
r-mdp 1.22.0-1 0 0.00 Molecular Degree of Perturbation calculates scores for transcriptome data samples based on their perturbation from controls BioArchLinuxBot 2023-10-25 20:48 (UTC)
r-massir 1.38.0-1 0 0.00 massiR: MicroArray Sample Sex Identifier BioArchLinuxBot 2023-10-25 23:30 (UTC)
r-lpeadj 1.62.0-2 0 0.00 A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size BioArchLinuxBot 2024-04-14 12:03 (UTC)
r-lionessr 1.16.0-1 0 0.00 Modeling networks for individual samples using LIONESS BioArchLinuxBot 2023-10-27 06:21 (UTC)
r-lineagespot 1.6.0-3 0 0.00 Detection of SARS-CoV-2 lineages in wastewater samples using next-generation sequencing pekkarr 2024-04-28 13:42 (UTC)
r-lhs 1.1.6-1 0 0.00 Latin Hypercube Samples BioArchLinuxBot 2022-12-18 00:02 (UTC)
r-lda 1.5.2-1 0 0.00 Collapsed Gibbs Sampling Methods for Topic Models pekkarr 2024-04-28 12:01 (UTC)
r-ksamples 1.2.10-2 0 0.00 K-Sample Rank Tests and their Combinations BioArchLinuxBot 2024-04-11 18:07 (UTC)
r-kcsmart 2.60.0-1 0 0.00 Multi sample aCGH analysis package using kernel convolution BioArchLinuxBot 2023-10-26 01:45 (UTC)
r-jaspacceptancesampling 0.18.3-1 0 0.00 Lot sampling for acceptance/rejection of lots BioArchLinuxBot 2024-01-12 12:19 (UTC)
r-isingsampler 0.2.3-1 0 0.00 Sampling Methods and Distribution Functions for the Ising Model BioArchLinuxBot 2023-08-21 12:05 (UTC)
r-genesis 2.32.0-1 0 0.00 GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness BioArchLinuxBot 2023-10-26 04:23 (UTC)
r-flowploidy 1.28.0-1 0 0.00 Analyze flow cytometer data to determine sample ploidy BioArchLinuxBot 2023-10-26 01:38 (UTC)
r-flowmap 1.40.0-1 0 0.00 Mapping cell populations in flow cytometry data for cross-sample comparisons using the Friedman-Rafsky Test BioArchLinuxBot 2024-04-13 18:15 (UTC)
r-erssa 1.20.0-1 0 0.00 Empirical RNA-seq Sample Size Analysis BioArchLinuxBot 2023-10-27 08:51 (UTC)
r-epidish 2.18.0-1 0 0.00 Epigenetic Dissection of Intra-Sample-Heterogeneity BioArchLinuxBot 2023-10-25 20:04 (UTC)
r-doppelgangr 1.30.0-1 0 0.00 Identify likely duplicate samples from genomic or meta-data BioArchLinuxBot 2023-10-27 07:14 (UTC)
r-dmrforpairs 1.35.0-2 0 0.00 identifying Differentially Methylated Regions between unique samples using array based methylation profiles BioArchLinuxBot 2024-02-11 18:14 (UTC)
r-demixt 1.18.0-1 0 0.00 Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms BioArchLinuxBot 2024-01-13 00:06 (UTC)
r-degraph 1.54.0-1 0 0.00 Two-sample tests on a graph BioArchLinuxBot 2023-10-26 03:12 (UTC)
r-deconstructsigs 1.8.0-3 0 0.00 Identifies Signatures Present in a Tumor Sample BioArchLinuxBot 2022-06-05 23:46 (UTC)
r-deconrnaseq 1.44.0-1 0 0.00 Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data BioArchLinuxBot 2023-10-26 00:45 (UTC)
r-dada2 1.30.0-1 0 0.00 Accurate, high-resolution sample inference from amplicon sequencing data greyltc 2023-11-02 09:37 (UTC)
r-cntools 1.58.0-1 0 0.00 Convert segment data into a region by sample matrix to allow for other high level computational analyses. BioArchLinuxBot 2023-10-26 05:39 (UTC)
r-cnanorm 1.48.0-2 0 0.00 A normalization method for Copy Number Aberration in cancer samples BioArchLinuxBot 2024-04-07 18:11 (UTC)
r-clubsandwich 0.5.10-4 0 0.00 Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections pekkarr 2024-04-25 21:30 (UTC)
r-bridgesampling 1.1.2-4 0 0.00 Bridge Sampling for Marginal Likelihoods and Bayes Factors BioArchLinuxBot 2022-06-05 21:24 (UTC)
r-bas 1.7.1-1 1 0.00 Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling petronny 2023-12-07 07:57 (UTC)
r-awst 1.10.0-1 0 0.00 Asymmetric Within-Sample Transformation BioArchLinuxBot 2023-10-27 06:11 (UTC)
r-alphahull 2.5-3 0 0.00 Generalization of the Convex Hull of a Sample of Points in the Plane pekkarr 2024-04-25 12:24 (UTC)
r-aldex2 1.34.0-1 0 0.00 Analysis Of Differential Abundance Taking Sample Variation Into Account BioArchLinuxBot 2023-10-27 05:53 (UTC)
r-adabag 5.0-2 0 0.00 Applies Multiclass AdaBoost.M1, SAMME and Bagging BioArchLinuxBot 2024-04-26 17:47 (UTC)
r-acceptancesampling 1.0.10-2 0 0.00 Creation and Evaluation of Acceptance Sampling Plans BioArchLinuxBot 2024-03-07 12:03 (UTC)

608 packages found. Page 7 of 13.

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