243 packages found. Page 4 of 5.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-sspaths 1.18.0-1 0 0.00 ssPATHS: Single Sample PATHway Score BioArchLinuxBot 2024-05-03 07:58 (UTC)
r-ssize 1.78.0-1 0 0.00 Estimate Microarray Sample Size BioArchLinuxBot 2024-05-01 18:29 (UTC)
r-sseq 1.42.0-1 0 0.00 Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size BioArchLinuxBot 2024-05-01 18:07 (UTC)
r-sizepower 1.74.0-1 0 0.00 Sample Size and Power Calculation in Micorarray Studies BioArchLinuxBot 2024-05-02 03:15 (UTC)
r-sispa 1.30.0-2 0 0.00 Method for Sample Integrated Set Profile Analysis BioArchLinuxBot 2024-02-13 18:03 (UTC)
r-singscore 1.24.0-1 0 0.00 Rank-based single-sample gene set scoring method BioArchLinuxBot 2024-05-03 12:19 (UTC)
r-sigspack 1.18.0-1 0 0.00 Mutational Signature Estimation for Single Samples BioArchLinuxBot 2024-05-03 05:15 (UTC)
r-seqsqc 1.26.0-1 0 0.00 A bioconductor package for sample quality check with next generation sequencing data BioArchLinuxBot 2024-05-02 20:42 (UTC)
r-sampleclassifier 1.28.0-1 0 0.00 Sample Classifier BioArchLinuxBot 2024-05-03 12:55 (UTC)
r-rsample 1.2.1-1 0 0.00 General Resampling Infrastructure BioArchLinuxBot 2024-03-25 12:07 (UTC)
r-rnaseqsamplesizedata 1.36.0-1 0 0.00 RnaSeqSampleSizeData BioArchLinuxBot 2024-05-03 07:01 (UTC)
r-rnaseqsamplesize 2.12.0-1 0 0.00 RnaSeqSampleSize BioArchLinuxBot 2023-10-27 15:44 (UTC)
r-rnaseqpower 1.44.0-1 0 0.00 Sample size for RNAseq studies BioArchLinuxBot 2024-05-02 04:20 (UTC)
r-rmspc 1.10.0-1 0 0.00 Multiple Sample Peak Calling BioArchLinuxBot 2024-05-03 01:06 (UTC)
r-raggedexperiment 1.28.0-1 0 0.00 Representation of Sparse Experiments and Assays Across Samples BioArchLinuxBot 2024-05-02 19:04 (UTC)
r-powsc 1.12.0-1 0 0.00 Simulation, power evaluation, and sample size recommendation for single cell RNA-seq BioArchLinuxBot 2024-05-03 00:15 (UTC)
r-pinfsc50 1.3.0-2 0 0.00 Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' BioArchLinuxBot 2024-03-16 18:08 (UTC)
r-phemd 1.18.0-2 0 0.00 Phenotypic EMD for comparison of single-cell samples BioArchLinuxBot 2024-04-28 18:00 (UTC)
r-pasilla 1.32.0-1 0 0.00 Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. BioArchLinuxBot 2024-05-03 13:45 (UTC)
r-osat 1.52.0-1 0 0.00 Optimal Sample Assignment Tool BioArchLinuxBot 2024-05-02 04:15 (UTC)
r-omixer 1.14.0-1 0 0.00 Omixer: multivariate and reproducible sample randomization to proactively counter batch effects in omics studies BioArchLinuxBot 2024-05-01 20:16 (UTC)
r-omicspca 1.22.0-1 0 0.00 An R package for quantitative integration and analysis of multiple omics assays from heterogeneous samples BioArchLinuxBot 2024-05-03 08:51 (UTC)
r-ocplus 1.78.0-1 0 0.00 Operating characteristics plus sample size and local fdr for microarray experiments BioArchLinuxBot 2024-05-01 19:05 (UTC)
r-muscat 1.18.0-1 0 0.00 Multi-sample multi-group scRNA-seq data analysis tools BioArchLinuxBot 2024-05-03 01:47 (UTC)
r-msstatssamplesize 1.13.0-2 0 0.00 Simulation tool for optimal design of high-dimensional MS-based proteomics experiment BioArchLinuxBot 2024-02-12 12:10 (UTC)
r-mosaics 2.42.0-1 0 0.00 MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq) BioArchLinuxBot 2024-05-02 23:44 (UTC)
r-methylcc 1.18.0-1 0 0.00 Estimate the cell composition of whole blood in DNA methylation samples BioArchLinuxBot 2024-05-03 15:09 (UTC)
r-mdp 1.24.0-1 0 0.00 Molecular Degree of Perturbation calculates scores for transcriptome data samples based on their perturbation from controls BioArchLinuxBot 2024-05-01 20:30 (UTC)
r-massir 1.40.0-1 0 0.00 massiR: MicroArray Sample Sex Identifier BioArchLinuxBot 2024-05-01 18:51 (UTC)
r-lpeadj 1.62.0-2 0 0.00 A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size BioArchLinuxBot 2024-04-14 12:03 (UTC)
r-lionessr 1.18.0-1 0 0.00 Modeling networks for individual samples using LIONESS BioArchLinuxBot 2024-05-02 19:09 (UTC)
r-lhs 1.1.6-1 0 0.00 Latin Hypercube Samples BioArchLinuxBot 2022-12-18 00:02 (UTC)
r-ksamples 1.2.10-2 0 0.00 K-Sample Rank Tests and their Combinations BioArchLinuxBot 2024-04-11 18:07 (UTC)
r-kcsmart 2.62.0-1 0 0.00 Multi sample aCGH analysis package using kernel convolution BioArchLinuxBot 2024-05-01 22:58 (UTC)
r-isingsampler 0.2.3-1 0 0.00 Sampling Methods and Distribution Functions for the Ising Model BioArchLinuxBot 2023-08-21 12:05 (UTC)
r-genesis 2.34.0-1 0 0.00 GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness BioArchLinuxBot 2024-05-02 02:29 (UTC)
r-flowploidy 1.30.0-1 0 0.00 Analyze flow cytometer data to determine sample ploidy BioArchLinuxBot 2024-05-01 20:42 (UTC)
r-flowmap 1.40.0-1 0 0.00 Mapping cell populations in flow cytometry data for cross-sample comparisons using the Friedman-Rafsky Test BioArchLinuxBot 2024-04-13 18:15 (UTC)
r-erssa 1.22.0-1 0 0.00 Empirical RNA-seq Sample Size Analysis BioArchLinuxBot 2024-05-02 22:21 (UTC)
r-epidish 2.20.0-1 0 0.00 Epigenetic Dissection of Intra-Sample-Heterogeneity BioArchLinuxBot 2024-05-01 19:05 (UTC)
r-doppelgangr 1.32.0-1 0 0.00 Identify likely duplicate samples from genomic or meta-data BioArchLinuxBot 2024-05-03 13:52 (UTC)
r-dmrforpairs 1.35.0-2 0 0.00 identifying Differentially Methylated Regions between unique samples using array based methylation profiles BioArchLinuxBot 2024-02-11 18:14 (UTC)
r-demixt 1.20.0-1 0 0.00 Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms BioArchLinuxBot 2024-05-03 13:57 (UTC)
r-degraph 1.56.0-1 0 0.00 Two-sample tests on a graph BioArchLinuxBot 2024-05-01 23:02 (UTC)
r-deconstructsigs 1.8.0-3 0 0.00 Identifies Signatures Present in a Tumor Sample BioArchLinuxBot 2022-06-05 23:46 (UTC)
r-deconrnaseq 1.46.0-1 0 0.00 Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data BioArchLinuxBot 2024-05-01 22:46 (UTC)
r-cntools 1.60.0-1 0 0.00 Convert segment data into a region by sample matrix to allow for other high level computational analyses. BioArchLinuxBot 2024-05-02 02:10 (UTC)
r-cnanorm 1.50.0-1 0 0.00 A normalization method for Copy Number Aberration in cancer samples BioArchLinuxBot 2024-05-02 05:13 (UTC)
r-awst 1.12.0-1 0 0.00 Asymmetric Within-Sample Transformation BioArchLinuxBot 2024-05-02 19:54 (UTC)
r-aldex2 1.36.0-1 0 0.00 Analysis Of Differential Abundance Taking Sample Variation Into Account BioArchLinuxBot 2024-05-02 19:17 (UTC)

243 packages found. Page 4 of 5.

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