|
r-ggspavis
|
1.10.0-1 |
0 |
0.00
|
Visualization functions for spatial transcriptomics data |
BioArchLinuxBot
|
2024-05-18 12:02 (UTC) |
|
r-htscluster
|
2.0.11-1 |
0 |
0.00
|
Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
BioArchLinuxBot
|
2023-09-05 12:04 (UTC) |
|
r-htsfilter
|
1.44.0-1 |
0 |
0.00
|
Filter replicated high-throughput transcriptome sequencing data |
BioArchLinuxBot
|
2024-05-02 22:09 (UTC) |
|
r-humantranscriptomecompendium
|
1.20.0-1 |
0 |
0.00
|
Tools to work with a Compendium of 181000 human transcriptome sequencing studies |
BioArchLinuxBot
|
2024-05-10 12:10 (UTC) |
|
r-icetea
|
1.22.0-1 |
0 |
0.00
|
Integrating Cap Enrichment with Transcript Expression Analysis |
BioArchLinuxBot
|
2024-05-03 05:08 (UTC) |
|
r-intercellar
|
2.10.0-1 |
0 |
0.00
|
InterCellar: an R-Shiny app for interactive analysis and exploration of cell-cell communication in single-cell transcriptomics |
BioArchLinuxBot
|
2024-05-02 23:08 (UTC) |
|
r-jaspdescriptives
|
0.18.3-1 |
0 |
0.00
|
Descriptives Module for JASP |
BioArchLinuxBot
|
2024-01-12 12:07 (UTC) |
|
r-jose
|
1.2.0-3 |
0 |
0.00
|
JavaScript Object Signing and Encryption |
peippo
|
2023-03-26 17:38 (UTC) |
|
r-jsonify
|
1.2.2-2 |
0 |
0.00
|
Convert Between 'R' Objects and Javascript Object Notation (JSON) |
peippo
|
2023-03-26 15:58 (UTC) |
|
r-knowseq
|
1.18.0-1 |
0 |
0.00
|
KnowSeq R/Bioc package: The Smart Transcriptomic Pipeline |
BioArchLinuxBot
|
2024-05-02 02:43 (UTC) |
|
r-leaflet
|
2.2.2-1 |
0 |
0.00
|
Create Interactive Web Maps with the JavaScript ‘Leaflet’ Library |
peippo
|
2024-03-27 13:19 (UTC) |
|
r-mast
|
1.30.0-1 |
0 |
0.00
|
Model-based Analysis of Single Cell Transcriptomics |
BioArchLinuxBot
|
2024-05-02 21:43 (UTC) |
|
r-mdp
|
1.24.0-1 |
0 |
0.00
|
Molecular Degree of Perturbation calculates scores for transcriptome data samples based on their perturbation from controls |
BioArchLinuxBot
|
2024-05-01 20:30 (UTC) |
|
r-mess
|
0.5.12-3 |
0 |
0.00
|
Miscellaneous Esoteric Statistical Scripts |
BioArchLinuxBot
|
2023-10-27 04:56 (UTC) |
|
r-methreg
|
1.14.0-1 |
0 |
0.00
|
Assessing the regulatory potential of DNA methylation regions or sites on gene transcription |
BioArchLinuxBot
|
2024-05-07 12:10 (UTC) |
|
r-moleculeexperiment
|
1.4.0-1 |
0 |
0.00
|
Prioritising a molecule-level storage of Spatial Transcriptomics Data |
pekkarr
|
2024-05-03 09:07 (UTC) |
|
r-motifbreakr
|
2.18.0-1 |
0 |
0.00
|
A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites |
BioArchLinuxBot
|
2024-05-03 19:12 (UTC) |
|
r-multiclust
|
1.34.0-1 |
0 |
0.00
|
multiClust: An R-package for Identifying Biologically Relevant Clusters in Cancer Transcriptome Profiles |
BioArchLinuxBot
|
2024-05-01 20:52 (UTC) |
|
r-ncmisc
|
1.2.0-5 |
0 |
0.00
|
Miscellaneous Functions for Creating Adaptive Functions and Scripts |
BioArchLinuxBot
|
2024-04-14 12:02 (UTC) |
|
r-networkd3
|
0.4-4 |
0 |
0.00
|
D3 JavaScript Network Graphs from R |
BioArchLinuxBot
|
2022-06-06 09:01 (UTC) |
|
r-nnsvg
|
1.8.0-1 |
0 |
0.00
|
Scalable identification of spatially variable genes in spatially-resolved transcriptomics data |
pekkarr
|
2024-05-18 12:04 (UTC) |
|
r-omada
|
1.6.0-1 |
0 |
0.00
|
Machine learning tools for automated transcriptome clustering analysis |
pekkarr
|
2024-05-02 12:55 (UTC) |
|
r-opossom
|
2.22.0-1 |
0 |
0.00
|
Comprehensive analysis of transcriptome data |
BioArchLinuxBot
|
2024-05-02 23:17 (UTC) |
|
r-pram
|
1.20.0-1 |
0 |
0.00
|
Pooling RNA-seq datasets for assembling transcript models |
BioArchLinuxBot
|
2024-05-03 01:01 (UTC) |
|
r-primirtss
|
1.22.0-1 |
0 |
0.00
|
Prediction of pri-miRNA Transcription Start Site |
BioArchLinuxBot
|
2024-05-03 19:03 (UTC) |
|
r-puma
|
3.46.0-1 |
0 |
0.00
|
Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and exon arrays and Human Transcriptome Array 2.0) |
pekkarr
|
2024-05-03 00:29 (UTC) |
|
r-quickjsr
|
1.1.3-1 |
0 |
0.00
|
Interface for the 'QuickJS' Lightweight 'JavaScript' Engine |
pekkarr
|
2024-01-31 18:15 (UTC) |
|
r-rcistarget
|
1.20.0-2 |
0 |
0.00
|
RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions |
BioArchLinuxBot
|
2024-02-14 18:04 (UTC) |
|
r-regionalst
|
1.2.0-1 |
0 |
0.00
|
Investigating regions of interest and performing cross-regional analysis with spatial transcriptomics data |
pekkarr
|
2024-05-03 03:48 (UTC) |
|
r-retrofit
|
1.4.0-1 |
0 |
0.00
|
Reference-free deconvolution of cell mixtures in spatial transcriptomics |
pekkarr
|
2024-05-02 04:49 (UTC) |
|
r-rgntx
|
1.6.0-1 |
0 |
0.00
|
Colocalization analysis of transcriptome elements in the presence of isoform heterogeneity and ambiguity |
pekkarr
|
2024-05-03 04:30 (UTC) |
|
r-rgraph2js
|
1.32.0-1 |
0 |
0.00
|
Convert a Graph into a D3js Script |
BioArchLinuxBot
|
2024-05-01 18:12 (UTC) |
|
r-rjsonio
|
1.3.1.9-3 |
0 |
0.00
|
Serialize R Objects to JSON, JavaScript Object Notation |
BioArchLinuxBot
|
2024-04-24 19:58 (UTC) |
|
r-rnaagecalc
|
1.16.0-1 |
0 |
0.00
|
A multi-tissue transcriptional age calculator |
BioArchLinuxBot
|
2024-05-23 00:09 (UTC) |
|
r-rnamodr
|
1.18.0-1 |
0 |
0.00
|
Detection of post-transcriptional modifications in high throughput sequencing data |
BioArchLinuxBot
|
2024-05-04 18:36 (UTC) |
|
r-rnamodr.ml
|
1.18.0-1 |
0 |
0.00
|
Detecting patterns of post-transcriptional modifications using machine learning |
BioArchLinuxBot
|
2024-05-03 06:33 (UTC) |
|
r-rsvg
|
2.6.0-2 |
0 |
0.00
|
Render SVG Images into PDF, PNG, (Encapsulated) PostScript, or Bitmap Arrays |
BioArchLinuxBot
|
2024-04-25 07:16 (UTC) |
|
r-rtn
|
2.28.0-1 |
0 |
0.00
|
RTN: Reconstruction of Transcriptional regulatory Networks and analysis of regulons |
BioArchLinuxBot
|
2024-05-02 19:21 (UTC) |
|
r-rtnsurvival
|
1.28.0-1 |
0 |
0.00
|
Survival analysis using transcriptional networks inferred by the RTN package |
BioArchLinuxBot
|
2024-05-03 00:37 (UTC) |
|
r-rtrm
|
1.42.0-1 |
0 |
0.00
|
Identification of Transcriptional Regulatory Modules from Protein-Protein Interaction Networks |
BioArchLinuxBot
|
2024-05-02 01:30 (UTC) |
|
r-saturn
|
1.12.0-1 |
0 |
0.00
|
Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications |
BioArchLinuxBot
|
2024-05-02 19:39 (UTC) |
|
r-signifinder
|
1.6.0-1 |
0 |
0.00
|
Collection and implementation of public transcriptional cancer signatures |
pekkarr
|
2024-05-09 18:22 (UTC) |
|
r-smite
|
1.30.0-1 |
0 |
0.00
|
Significance-based Modules Integrating the Transcriptome and Epigenome |
BioArchLinuxBot
|
2023-10-28 13:02 (UTC) |
|
r-spaniel
|
1.18.0-1 |
0 |
0.00
|
Spatial Transcriptomics Analysis |
BioArchLinuxBot
|
2024-05-03 08:41 (UTC) |
|
r-spatialcpie
|
1.20.0-1 |
0 |
0.00
|
Cluster analysis of Spatial Transcriptomics data |
BioArchLinuxBot
|
2024-05-03 08:13 (UTC) |
|
r-spatiallibd
|
1.16.0-1 |
0 |
0.00
|
an R/Bioconductor package to visualize spatially-resolved transcriptomics data |
pekkarr
|
2024-05-04 18:11 (UTC) |
|
r-splicingfactory
|
1.12.0-1 |
0 |
0.00
|
Splicing Diversity Analysis for Transcriptome Data |
BioArchLinuxBot
|
2024-05-03 07:35 (UTC) |
|
r-splinter
|
1.30.0-1 |
0 |
0.00
|
Splice Interpreter of Transcripts |
BioArchLinuxBot
|
2024-05-04 18:06 (UTC) |
|
r-spotclean
|
1.6.0-1 |
0 |
0.00
|
SpotClean adjusts for spot swapping in spatial transcriptomics data |
pekkarr
|
2024-05-03 09:00 (UTC) |
|
r-spotlight
|
1.8.0-1 |
0 |
0.00
|
`SPOTlight`: Spatial Transcriptomics Deconvolution |
pekkarr
|
2024-05-04 18:15 (UTC) |