794 packages found. Page 5 of 16.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-scddboost 1.6.0-1 0 0.00 A compositional model to assess expression changes from single-cell rna-seq data pekkarr 2024-05-02 21:56 (UTC)
r-scdd 1.28.0-1 0 0.00 Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions BioArchLinuxBot 2024-05-03 01:34 (UTC)
r-scclassifr 1.2.0-3 0 0.00 Pretrained learning models for cell type prediction on single cell RNA-sequencing data BioArchLinuxBot 2022-06-07 13:21 (UTC)
r-sccb2 1.14.0-1 0 0.00 CB2 improves power of cell detection in droplet-based single-cell RNA sequencing data BioArchLinuxBot 2024-05-03 01:56 (UTC)
r-scbubbletree 1.6.0-1 0 0.00 Quantitative visual exploration of scRNA-seq data pekkarr 2024-05-02 05:55 (UTC)
r-scbn 1.22.0-1 0 0.00 A statistical normalization method and differential expression analysis for RNA-seq data between different species BioArchLinuxBot 2024-05-02 03:14 (UTC)
r-scbfa 1.18.0-1 0 0.00 A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq BioArchLinuxBot 2024-05-03 13:39 (UTC)
r-scatedata 1.12.0-1 0 0.00 Data for SCATE (Single-cell ATAC-seq Signal Extraction and Enhancement) BioArchLinuxBot 2024-04-13 18:13 (UTC)
r-scate 1.12.0-1 0 0.00 Single-cell ATAC-seq Signal Extraction and Enhancement BioArchLinuxBot 2024-04-13 18:21 (UTC)
r-scarray.sat 1.4.0-1 0 0.00 Large-scale single-cell RNA-seq data analysis using GDS files and Seurat pekkarr 2024-05-03 00:09 (UTC)
r-scarray 1.12.0-1 0 0.00 Large-scale single-cell RNA-seq data manipulation with GDS files BioArchLinuxBot 2024-05-02 21:20 (UTC)
r-scannotatr 1.10.0-1 0 0.00 Pretrained learning models for cell type prediction on single cell RNA-sequencing data BioArchLinuxBot 2024-05-02 23:57 (UTC)
r-scale4c 1.26.0-1 0 0.00 Scale4C: an R/Bioconductor package for scale-space transformation of 4C-seq data BioArchLinuxBot 2024-05-02 19:24 (UTC)
r-saver 1.1.2-4 0 0.00 Single-Cell RNA-Seq Gene Expression Recovery BioArchLinuxBot 2022-06-06 14:00 (UTC)
r-saturn 1.12.0-1 0 0.00 Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications BioArchLinuxBot 2024-05-02 19:39 (UTC)
r-sarks 1.16.0-1 0 0.00 Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains BioArchLinuxBot 2024-05-02 00:25 (UTC)
r-sangerseqr 1.40.0-1 0 0.00 Tools for Sanger Sequencing Data in R BioArchLinuxBot 2024-05-03 18:09 (UTC)
r-sangeranalyser 1.14.0-1 0 0.00 sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R BioArchLinuxBot 2024-05-03 18:50 (UTC)
r-ruvseq 1.38.0-1 0 0.00 Remove Unwanted Variation from RNA-Seq Data BioArchLinuxBot 2024-05-03 04:15 (UTC)
r-rsweep 1.16.0-1 0 0.00 Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences BioArchLinuxBot 2024-05-02 04:36 (UTC)
r-rsubread 2.18.0-1 0 0.00 Mapping, quantification and variant analysis of sequencing data BioArchLinuxBot 2024-05-02 03:20 (UTC)
r-rseqan 1.24.0-1 0 0.00 R SeqAn BioArchLinuxBot 2024-05-01 18:24 (UTC)
r-rqc 1.38.0-1 0 0.00 Quality Control Tool for High-Throughput Sequencing Data BioArchLinuxBot 2024-05-03 05:47 (UTC)
r-rprimer 1.8.0-1 0 0.00 Design Degenerate Oligos from a Multiple DNA Sequence Alignment pekkarr 2024-05-02 18:38 (UTC)
r-roseq 1.16.0-1 0 0.00 Modeling expression ranks for noise-tolerant differential expression analysis of scRNA-Seq data BioArchLinuxBot 2024-05-01 18:58 (UTC)
r-roar 1.40.0-1 0 0.00 Identify differential APA usage from RNA-seq alignments BioArchLinuxBot 2024-05-03 00:55 (UTC)
r-rnaseqsamplesizedata 1.36.0-1 0 0.00 RnaSeqSampleSizeData BioArchLinuxBot 2024-05-03 07:01 (UTC)
r-rnaseqsamplesize 2.14.0-1 0 0.00 RnaSeqSampleSize BioArchLinuxBot 2024-05-23 00:08 (UTC)
r-rnaseqr 1.16.0-4 0 0.00 RNASeqR: an R package for automated two-group RNA-Seq analysis workflow BioArchLinuxBot 2023-04-29 08:38 (UTC)
r-rnaseqpower 1.44.0-1 0 0.00 Sample size for RNAseq studies BioArchLinuxBot 2024-05-02 04:20 (UTC)
r-rnaseqcovarimpute 1.2.0-1 0 0.00 Impute Covariate Data in RNA Sequencing Studies pekkarr 2024-05-10 12:04 (UTC)
r-rnaseqcomp 1.34.0-1 0 0.00 Benchmarks for RNA-seq Quantification Pipelines BioArchLinuxBot 2024-05-02 04:26 (UTC)
r-rnasense 1.18.0-1 0 0.00 Analysis of Time-Resolved RNA-Seq Data BioArchLinuxBot 2024-05-02 19:49 (UTC)
r-rnamodr.ribomethseq 1.18.0-1 0 0.00 Detection of 2'-O methylations by RiboMethSeq BioArchLinuxBot 2024-05-03 06:34 (UTC)
r-rnamodr.alkanilineseq 1.18.0-1 0 0.00 Detection of m7G, m3C and D modification by AlkAnilineSeq BioArchLinuxBot 2024-05-03 06:31 (UTC)
r-rnamodr 1.18.0-1 0 0.00 Detection of post-transcriptional modifications in high throughput sequencing data BioArchLinuxBot 2024-05-04 18:36 (UTC)
r-rmmquant 1.22.0-1 0 0.00 RNA-Seq multi-mapping Reads Quantification Tool BioArchLinuxBot 2024-05-03 02:46 (UTC)
r-rlseq 1.6.0-1 0 0.00 RLSeq: An analysis package for R-loop mapping data BioArchLinuxBot 2023-04-27 22:08 (UTC)
r-rjmcmcnucleosomes 1.28.0-1 0 0.00 Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq) BioArchLinuxBot 2024-05-03 03:40 (UTC)
r-rifi 1.8.0-1 0 0.00 'rifi' analyses data from rifampicin time series created by microarray or RNAseq pekkarr 2024-05-03 01:18 (UTC)
r-riboseqr 1.38.0-1 0 0.00 Analysis of sequencing data from ribosome profiling experiments BioArchLinuxBot 2024-05-02 00:46 (UTC)
r-ribodipa 1.12.0-1 0 0.00 Differential pattern analysis for Ribo-seq data BioArchLinuxBot 2024-05-08 18:09 (UTC)
r-rhtslib 2.4.1-1 0 0.00 HTSlib high-throughput sequencing library as an R package greyltc 2024-04-08 14:35 (UTC)
r-rfastp 1.14.0-1 0 0.00 An Ultra-Fast and All-in-One Fastq Preprocessor (Quality Control, Adapter, low quality and polyX trimming) and UMI Sequence Parsing). BioArchLinuxBot 2024-05-01 20:18 (UTC)
r-regionreport 1.38.0-1 0 0.00 Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results BioArchLinuxBot 2024-05-03 09:23 (UTC)
r-redseq 1.50.0-1 0 0.00 Analysis of high-throughput sequencing data processed by restriction enzyme digestion BioArchLinuxBot 2024-05-03 12:31 (UTC)
r-rcsl 1.12.0-1 0 0.00 Rank Constrained Similarity Learning for single cell RNA sequencing data BioArchLinuxBot 2024-05-02 22:03 (UTC)
r-rcade 1.39.1-4 0 0.00 R-based analysis of ChIP-seq And Differential Expression - a tool for integrating a count-based ChIP-seq analysis with differential expression summary data BioArchLinuxBot 2023-04-29 06:08 (UTC)
r-rbm 1.36.0-1 0 0.00 RBM: a R package for microarray and RNA-Seq data analysis BioArchLinuxBot 2024-05-01 22:51 (UTC)
r-rbec 1.12.0-1 0 0.00 Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities BioArchLinuxBot 2024-05-03 03:43 (UTC)

794 packages found. Page 5 of 16.

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