r-singlecelltk
|
2.14.0-1 |
0 |
0.00
|
Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data |
BioArchLinuxBot
|
2024-05-04 18:42 (UTC) |
r-ataccogaps
|
1.6.0-1 |
0 |
0.00
|
Analysis Tools for scATACseq Data with CoGAPS |
pekkarr
|
2024-05-04 18:41 (UTC) |
r-scrnaseq
|
2.18.0-1 |
0 |
0.00
|
Collection of Public Single-Cell RNA-Seq Datasets |
BioArchLinuxBot
|
2024-05-04 18:38 (UTC) |
r-rnamodr
|
1.18.0-1 |
0 |
0.00
|
Detection of post-transcriptional modifications in high throughput sequencing data |
BioArchLinuxBot
|
2024-05-04 18:36 (UTC) |
r-xnastring
|
1.12.0-1 |
0 |
0.00
|
Efficient Manipulation of Modified Oligonucleotide Sequences |
BioArchLinuxBot
|
2024-05-04 18:04 (UTC) |
r-fraser
|
2.0.0-1 |
0 |
0.00
|
Find RAre Splicing Events in RNA-Seq Data |
BioArchLinuxBot
|
2024-05-04 12:26 (UTC) |
r-msa2dist
|
1.8.0-1 |
0 |
0.00
|
MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis |
pekkarr
|
2024-05-04 12:18 (UTC) |
r-outrider
|
1.22.0-1 |
0 |
0.00
|
OUTlier in RNA-Seq fInDER |
BioArchLinuxBot
|
2024-05-04 12:16 (UTC) |
ocaml-oseq
|
0.5.1-1 |
0 |
0.00
|
Purely functional iterators compatible with standard seq for OCaml |
dpeukert
|
2024-05-04 01:13 (UTC) |
r-gdnainrnaseqdata
|
1.4.0-1 |
0 |
0.00
|
RNA-seq data with different levels of gDNA contamination |
pekkarr
|
2024-05-04 01:03 (UTC) |
r-tweedeseqcountdata
|
1.42.0-1 |
0 |
0.00
|
RNA-seq count data employed in the vignette of the tweeDEseq package |
pekkarr
|
2024-05-04 00:40 (UTC) |
r-tximportdata
|
1.32.0-1 |
0 |
0.00
|
provides the output of running various transcript abundance quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project |
pekkarr
|
2024-05-04 00:35 (UTC) |
r-hsmmsinglecell
|
1.24.0-1 |
0 |
0.00
|
Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts (HSMM) |
BioArchLinuxBot
|
2024-05-04 00:25 (UTC) |
r-chromstardata
|
1.30.0-1 |
0 |
0.00
|
ChIP-seq data for Demonstration Purposes |
BioArchLinuxBot
|
2024-05-04 00:24 (UTC) |
r-breakpointrdata
|
1.22.0-1 |
0 |
0.00
|
Strand-seq data for demonstration purposes |
BioArchLinuxBot
|
2024-05-04 00:19 (UTC) |
r-seq2pathway.data
|
1.36.0-1 |
0 |
0.00
|
data set for R package seq2pathway |
BioArchLinuxBot
|
2024-05-04 00:14 (UTC) |
r-nadfinder
|
1.28.0-1 |
0 |
0.00
|
Call wide peaks for sequencing data |
BioArchLinuxBot
|
2024-05-03 19:20 (UTC) |
r-esatac
|
1.26.0-1 |
0 |
0.00
|
An Easy-to-use Systematic pipeline for ATACseq data analysis |
BioArchLinuxBot
|
2024-05-03 19:17 (UTC) |
r-atacseqqc
|
1.28.0-1 |
0 |
0.00
|
ATAC-seq Quality Control |
BioArchLinuxBot
|
2024-05-03 19:09 (UTC) |
r-daglogo
|
1.42.0-1 |
0 |
0.00
|
dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory |
BioArchLinuxBot
|
2024-05-03 19:07 (UTC) |
r-matrixrider
|
1.36.0-1 |
0 |
0.00
|
Obtain total affinity and occupancies for binding site matrices on a given sequence |
BioArchLinuxBot
|
2024-05-03 19:00 (UTC) |
r-motifstack
|
1.48.0-1 |
0 |
0.00
|
Plot stacked logos for single or multiple DNA, RNA and amino acid sequence |
BioArchLinuxBot
|
2024-05-03 18:57 (UTC) |
r-easier
|
1.10.0-1 |
0 |
0.00
|
Estimate Systems Immune Response from RNA-seq data |
BioArchLinuxBot
|
2024-05-03 18:53 (UTC) |
r-netsmooth
|
1.24.0-1 |
0 |
0.00
|
Network smoothing for scRNAseq |
BioArchLinuxBot
|
2024-05-03 18:51 (UTC) |
r-sangeranalyser
|
1.14.0-1 |
0 |
0.00
|
sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R |
BioArchLinuxBot
|
2024-05-03 18:50 (UTC) |
r-tbsignatureprofiler
|
1.16.0-1 |
0 |
0.00
|
Profile RNA-Seq Data Using TB Pathway Signatures |
BioArchLinuxBot
|
2024-05-03 18:37 (UTC) |
r-scifer
|
1.6.0-1 |
0 |
0.00
|
Single-Cell Immunoglobulin Filtering of Sanger Sequences |
pekkarr
|
2024-05-03 18:30 (UTC) |
r-chipenrich
|
2.28.0-1 |
0 |
0.00
|
Gene Set Enrichment For ChIP-seq Peak Data |
BioArchLinuxBot
|
2024-05-03 18:26 (UTC) |
r-clusterexperiment
|
2.24.0-1 |
0 |
0.00
|
Compare Clusterings for Single-Cell Sequencing |
BioArchLinuxBot
|
2024-05-03 18:21 (UTC) |
r-gsva
|
1.52.0-1 |
0 |
0.00
|
Gene Set Variation Analysis for Microarray and RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 18:13 (UTC) |
r-sangerseqr
|
1.40.0-1 |
0 |
0.00
|
Tools for Sanger Sequencing Data in R |
BioArchLinuxBot
|
2024-05-03 18:09 (UTC) |
r-dmrcate
|
2.99.6-1 |
0 |
0.00
|
Methylation array and sequencing spatial analysis methods |
BioArchLinuxBot
|
2024-05-03 15:14 (UTC) |
r-yarn
|
1.30.0-1 |
0 |
0.00
|
YARN: Robust Multi-Condition RNA-Seq Preprocessing and Normalization |
BioArchLinuxBot
|
2024-05-03 15:08 (UTC) |
r-lobstahs
|
1.30.0-1 |
0 |
0.00
|
Lipid and Oxylipin Biomarker Screening through Adduct Hierarchy Sequences |
BioArchLinuxBot
|
2024-05-03 14:50 (UTC) |
r-sctreeviz
|
1.10.0-1 |
0 |
0.00
|
R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations |
BioArchLinuxBot
|
2024-05-03 14:45 (UTC) |
r-sctensor
|
2.14.0-1 |
0 |
0.00
|
Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition |
BioArchLinuxBot
|
2024-05-03 14:38 (UTC) |
r-pcaexplorer
|
2.30.0-1 |
0 |
0.00
|
Interactive Visualization of RNA-seq Data Using a Principal Components Approach |
BioArchLinuxBot
|
2024-05-03 14:35 (UTC) |
r-demixt
|
1.20.0-1 |
0 |
0.00
|
Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms |
BioArchLinuxBot
|
2024-05-03 13:57 (UTC) |
r-damirseq
|
2.16.0-1 |
0 |
0.00
|
Data Mining for RNA-seq data: normalization, feature selection and classification |
BioArchLinuxBot
|
2024-05-03 13:54 (UTC) |
r-pasilla
|
1.32.0-1 |
0 |
0.00
|
Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. |
BioArchLinuxBot
|
2024-05-03 13:45 (UTC) |
r-scbfa
|
1.18.0-1 |
0 |
0.00
|
A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq |
BioArchLinuxBot
|
2024-05-03 13:39 (UTC) |
r-scruff
|
1.22.0-1 |
0 |
0.00
|
Single Cell RNA-Seq UMI Filtering Facilitator (scruff) |
BioArchLinuxBot
|
2024-05-03 13:32 (UTC) |
gsequencer
|
6.10.1-1 |
0 |
0.00
|
Advanced Gtk+ Sequencer |
jkraehemann
|
2024-05-03 13:14 (UTC) |
r-dexseq
|
1.50.0-1 |
0 |
0.00
|
Inference of differential exon usage in RNA-Seq |
BioArchLinuxBot
|
2024-05-03 13:01 (UTC) |
r-nbamseq
|
1.20.0-1 |
0 |
0.00
|
Negative Binomial Additive Model for RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 13:00 (UTC) |
r-zinbwave
|
1.26.0-1 |
0 |
0.00
|
Zero-Inflated Negative Binomial Model for RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 12:56 (UTC) |
r-sctgif
|
1.18.0-1 |
0 |
0.00
|
Cell type annotation for unannotated single-cell RNA-Seq data |
BioArchLinuxBot
|
2024-05-03 12:53 (UTC) |
r-uncoverapplib
|
1.14.0-1 |
0 |
0.00
|
Interactive graphical application for clinical assessment of sequence coverage at the base-pair level |
BioArchLinuxBot
|
2024-05-03 12:47 (UTC) |
r-vulcan
|
1.26.0-1 |
0 |
0.00
|
VirtUaL ChIP-Seq data Analysis using Networks |
BioArchLinuxBot
|
2024-05-03 12:35 (UTC) |
r-guideseq
|
1.34.0-1 |
0 |
0.00
|
GUIDE-seq analysis pipeline |
BioArchLinuxBot
|
2024-05-03 12:32 (UTC) |