791 packages found. Page 1 of 16.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-singlecelltk 2.14.0-1 0 0.00 Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data BioArchLinuxBot 2024-05-04 18:42 (UTC)
r-ataccogaps 1.6.0-1 0 0.00 Analysis Tools for scATACseq Data with CoGAPS pekkarr 2024-05-04 18:41 (UTC)
r-scrnaseq 2.18.0-1 0 0.00 Collection of Public Single-Cell RNA-Seq Datasets BioArchLinuxBot 2024-05-04 18:38 (UTC)
r-rnamodr 1.18.0-1 0 0.00 Detection of post-transcriptional modifications in high throughput sequencing data BioArchLinuxBot 2024-05-04 18:36 (UTC)
r-xnastring 1.12.0-1 0 0.00 Efficient Manipulation of Modified Oligonucleotide Sequences BioArchLinuxBot 2024-05-04 18:04 (UTC)
r-fraser 2.0.0-1 0 0.00 Find RAre Splicing Events in RNA-Seq Data BioArchLinuxBot 2024-05-04 12:26 (UTC)
r-msa2dist 1.8.0-1 0 0.00 MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis pekkarr 2024-05-04 12:18 (UTC)
r-outrider 1.22.0-1 0 0.00 OUTlier in RNA-Seq fInDER BioArchLinuxBot 2024-05-04 12:16 (UTC)
ocaml-oseq 0.5.1-1 0 0.00 Purely functional iterators compatible with standard seq for OCaml dpeukert 2024-05-04 01:13 (UTC)
r-gdnainrnaseqdata 1.4.0-1 0 0.00 RNA-seq data with different levels of gDNA contamination pekkarr 2024-05-04 01:03 (UTC)
r-tweedeseqcountdata 1.42.0-1 0 0.00 RNA-seq count data employed in the vignette of the tweeDEseq package pekkarr 2024-05-04 00:40 (UTC)
r-tximportdata 1.32.0-1 0 0.00 provides the output of running various transcript abundance quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project pekkarr 2024-05-04 00:35 (UTC)
r-hsmmsinglecell 1.24.0-1 0 0.00 Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts (HSMM) BioArchLinuxBot 2024-05-04 00:25 (UTC)
r-chromstardata 1.30.0-1 0 0.00 ChIP-seq data for Demonstration Purposes BioArchLinuxBot 2024-05-04 00:24 (UTC)
r-breakpointrdata 1.22.0-1 0 0.00 Strand-seq data for demonstration purposes BioArchLinuxBot 2024-05-04 00:19 (UTC)
r-seq2pathway.data 1.36.0-1 0 0.00 data set for R package seq2pathway BioArchLinuxBot 2024-05-04 00:14 (UTC)
r-nadfinder 1.28.0-1 0 0.00 Call wide peaks for sequencing data BioArchLinuxBot 2024-05-03 19:20 (UTC)
r-esatac 1.26.0-1 0 0.00 An Easy-to-use Systematic pipeline for ATACseq data analysis BioArchLinuxBot 2024-05-03 19:17 (UTC)
r-atacseqqc 1.28.0-1 0 0.00 ATAC-seq Quality Control BioArchLinuxBot 2024-05-03 19:09 (UTC)
r-daglogo 1.42.0-1 0 0.00 dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory BioArchLinuxBot 2024-05-03 19:07 (UTC)
r-matrixrider 1.36.0-1 0 0.00 Obtain total affinity and occupancies for binding site matrices on a given sequence BioArchLinuxBot 2024-05-03 19:00 (UTC)
r-motifstack 1.48.0-1 0 0.00 Plot stacked logos for single or multiple DNA, RNA and amino acid sequence BioArchLinuxBot 2024-05-03 18:57 (UTC)
r-easier 1.10.0-1 0 0.00 Estimate Systems Immune Response from RNA-seq data BioArchLinuxBot 2024-05-03 18:53 (UTC)
r-netsmooth 1.24.0-1 0 0.00 Network smoothing for scRNAseq BioArchLinuxBot 2024-05-03 18:51 (UTC)
r-sangeranalyser 1.14.0-1 0 0.00 sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R BioArchLinuxBot 2024-05-03 18:50 (UTC)
r-tbsignatureprofiler 1.16.0-1 0 0.00 Profile RNA-Seq Data Using TB Pathway Signatures BioArchLinuxBot 2024-05-03 18:37 (UTC)
r-scifer 1.6.0-1 0 0.00 Single-Cell Immunoglobulin Filtering of Sanger Sequences pekkarr 2024-05-03 18:30 (UTC)
r-chipenrich 2.28.0-1 0 0.00 Gene Set Enrichment For ChIP-seq Peak Data BioArchLinuxBot 2024-05-03 18:26 (UTC)
r-clusterexperiment 2.24.0-1 0 0.00 Compare Clusterings for Single-Cell Sequencing BioArchLinuxBot 2024-05-03 18:21 (UTC)
r-gsva 1.52.0-1 0 0.00 Gene Set Variation Analysis for Microarray and RNA-Seq Data BioArchLinuxBot 2024-05-03 18:13 (UTC)
r-sangerseqr 1.40.0-1 0 0.00 Tools for Sanger Sequencing Data in R BioArchLinuxBot 2024-05-03 18:09 (UTC)
r-dmrcate 2.99.6-1 0 0.00 Methylation array and sequencing spatial analysis methods BioArchLinuxBot 2024-05-03 15:14 (UTC)
r-yarn 1.30.0-1 0 0.00 YARN: Robust Multi-Condition RNA-Seq Preprocessing and Normalization BioArchLinuxBot 2024-05-03 15:08 (UTC)
r-lobstahs 1.30.0-1 0 0.00 Lipid and Oxylipin Biomarker Screening through Adduct Hierarchy Sequences BioArchLinuxBot 2024-05-03 14:50 (UTC)
r-sctreeviz 1.10.0-1 0 0.00 R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations BioArchLinuxBot 2024-05-03 14:45 (UTC)
r-sctensor 2.14.0-1 0 0.00 Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition BioArchLinuxBot 2024-05-03 14:38 (UTC)
r-pcaexplorer 2.30.0-1 0 0.00 Interactive Visualization of RNA-seq Data Using a Principal Components Approach BioArchLinuxBot 2024-05-03 14:35 (UTC)
r-demixt 1.20.0-1 0 0.00 Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms BioArchLinuxBot 2024-05-03 13:57 (UTC)
r-damirseq 2.16.0-1 0 0.00 Data Mining for RNA-seq data: normalization, feature selection and classification BioArchLinuxBot 2024-05-03 13:54 (UTC)
r-pasilla 1.32.0-1 0 0.00 Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. BioArchLinuxBot 2024-05-03 13:45 (UTC)
r-scbfa 1.18.0-1 0 0.00 A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq BioArchLinuxBot 2024-05-03 13:39 (UTC)
r-scruff 1.22.0-1 0 0.00 Single Cell RNA-Seq UMI Filtering Facilitator (scruff) BioArchLinuxBot 2024-05-03 13:32 (UTC)
gsequencer 6.10.1-1 0 0.00 Advanced Gtk+ Sequencer jkraehemann 2024-05-03 13:14 (UTC)
r-dexseq 1.50.0-1 0 0.00 Inference of differential exon usage in RNA-Seq BioArchLinuxBot 2024-05-03 13:01 (UTC)
r-nbamseq 1.20.0-1 0 0.00 Negative Binomial Additive Model for RNA-Seq Data BioArchLinuxBot 2024-05-03 13:00 (UTC)
r-zinbwave 1.26.0-1 0 0.00 Zero-Inflated Negative Binomial Model for RNA-Seq Data BioArchLinuxBot 2024-05-03 12:56 (UTC)
r-sctgif 1.18.0-1 0 0.00 Cell type annotation for unannotated single-cell RNA-Seq data BioArchLinuxBot 2024-05-03 12:53 (UTC)
r-uncoverapplib 1.14.0-1 0 0.00 Interactive graphical application for clinical assessment of sequence coverage at the base-pair level BioArchLinuxBot 2024-05-03 12:47 (UTC)
r-vulcan 1.26.0-1 0 0.00 VirtUaL ChIP-Seq data Analysis using Networks BioArchLinuxBot 2024-05-03 12:35 (UTC)
r-guideseq 1.34.0-1 0 0.00 GUIDE-seq analysis pipeline BioArchLinuxBot 2024-05-03 12:32 (UTC)

791 packages found. Page 1 of 16.

1 2 3 4 5 6 .. 16 Next › Last »