|
r-riboseqr
|
1.38.0-1 |
0 |
0.00
|
Analysis of sequencing data from ribosome profiling experiments |
BioArchLinuxBot
|
2024-05-02 00:46 (UTC) |
|
r-rhtslib
|
2.4.1-1 |
0 |
0.00
|
HTSlib high-throughput sequencing library as an R package |
greyltc
|
2024-04-08 14:35 (UTC) |
|
r-redseq
|
1.50.0-1 |
0 |
0.00
|
Analysis of high-throughput sequencing data processed by restriction enzyme digestion |
BioArchLinuxBot
|
2024-05-03 12:31 (UTC) |
|
r-rcsl
|
1.12.0-1 |
0 |
0.00
|
Rank Constrained Similarity Learning for single cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-02 22:03 (UTC) |
|
r-rbec
|
1.12.0-1 |
0 |
0.00
|
Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities |
BioArchLinuxBot
|
2024-05-03 03:43 (UTC) |
|
r-rarevariantvis
|
2.32.0-1 |
0 |
0.00
|
A suite for analysis of rare genomic variants in whole genome sequencing data |
BioArchLinuxBot
|
2024-05-03 05:10 (UTC) |
|
r-r3cseq
|
1.50.0-1 |
0 |
0.00
|
Analysis of Chromosome Conformation Capture and Next-generation Sequencing (3C-seq) |
BioArchLinuxBot
|
2024-05-03 01:05 (UTC) |
|
r-qdnaseq
|
1.40.0-1 |
0 |
0.00
|
Quantitative DNA Sequencing for Chromosomal Aberrations |
BioArchLinuxBot
|
2024-05-02 01:59 (UTC) |
|
r-purecn
|
2.10.0-1 |
0 |
0.00
|
Copy number calling and SNV classification using targeted short read sequencing |
BioArchLinuxBot
|
2024-05-03 04:45 (UTC) |
|
r-ppcseq
|
1.12.0-1 |
0 |
0.00
|
Probabilistic Outlier Identification for RNA Sequencing Generalized Linear Models |
BioArchLinuxBot
|
2024-05-02 05:46 (UTC) |
|
r-poiclaclu
|
1.0.2.1-10 |
0 |
0.00
|
Classification and Clustering of Sequencing Data Based on a Poisson Model |
BioArchLinuxBot
|
2024-04-24 20:41 (UTC) |
|
r-nbpseq
|
0.3.1-1 |
0 |
0.00
|
Negative Binomial Models for RNA-Sequencing Data |
BioArchLinuxBot
|
2022-06-09 13:04 (UTC) |
|
r-nanomethviz
|
3.0.2-1 |
0 |
0.00
|
Visualise methlation data from Oxford Nanopore sequencing |
BioArchLinuxBot
|
2024-05-17 00:02 (UTC) |
|
r-nadfinder
|
1.28.0-1 |
0 |
0.00
|
Call wide peaks for sequencing data |
BioArchLinuxBot
|
2024-05-03 19:20 (UTC) |
|
r-msgbsr
|
1.26.0-1 |
0 |
0.00
|
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions |
BioArchLinuxBot
|
2023-10-27 15:27 (UTC) |
|
r-mpfe
|
1.40.0-1 |
0 |
0.00
|
Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data |
BioArchLinuxBot
|
2024-05-02 04:18 (UTC) |
|
r-methylkit
|
1.30.0-1 |
0 |
0.00
|
DNA methylation analysis from high-throughput bisulfite sequencing results |
BioArchLinuxBot
|
2024-05-03 00:57 (UTC) |
|
r-methtargetedngs
|
1.36.0-1 |
0 |
0.00
|
Perform Methylation Analysis on Next Generation Sequencing Data |
BioArchLinuxBot
|
2024-05-11 12:03 (UTC) |
|
r-methrix
|
1.18.0-1 |
0 |
0.00
|
Fast and efficient summarization of generic bedGraph files from Bisufite sequencing |
BioArchLinuxBot
|
2024-05-03 03:15 (UTC) |
|
r-methinheritsim
|
1.26.0-1 |
0 |
0.00
|
Simulating Whole-Genome Inherited Bisulphite Sequencing Data |
BioArchLinuxBot
|
2024-05-03 03:37 (UTC) |
|
r-methcp
|
1.13.0-3 |
0 |
0.00
|
Differential methylation anlsysis for bisulfite sequencing data |
BioArchLinuxBot
|
2024-04-28 18:24 (UTC) |
|
r-metagenomeseq
|
1.46.0-1 |
0 |
0.00
|
Statistical analysis for sparse high-throughput sequencing |
BioArchLinuxBot
|
2024-05-01 22:55 (UTC) |
|
r-mdts
|
1.24.0-1 |
0 |
0.00
|
Detection of de novo deletion in targeted sequencing trios |
BioArchLinuxBot
|
2024-05-02 23:41 (UTC) |
|
r-madseq
|
1.30.0-1 |
0 |
0.00
|
Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data |
BioArchLinuxBot
|
2024-05-03 05:04 (UTC) |
|
r-lymphoseq
|
1.32.0-1 |
0 |
0.00
|
Analyze high-throughput sequencing of T and B cell receptors |
BioArchLinuxBot
|
2024-05-02 01:54 (UTC) |
|
r-lineagespot
|
1.8.0-1 |
0 |
0.00
|
Detection of SARS-CoV-2 lineages in wastewater samples using next-generation sequencing |
pekkarr
|
2024-05-03 05:16 (UTC) |
|
r-katdetectr
|
1.6.0-1 |
0 |
0.00
|
Detection, Characterization and Visualization of Kataegis in Sequencing Data |
pekkarr
|
2024-05-06 18:03 (UTC) |
|
r-isanalytics
|
1.14.0-1 |
0 |
0.00
|
Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies |
BioArchLinuxBot
|
2024-05-01 21:55 (UTC) |
|
r-iaseq
|
1.48.0-1 |
0 |
0.00
|
integrating multiple sequencing datasets for detecting allele-specific events |
BioArchLinuxBot
|
2024-05-02 04:18 (UTC) |
|
r-humantranscriptomecompendium
|
1.20.0-1 |
0 |
0.00
|
Tools to work with a Compendium of 181000 human transcriptome sequencing studies |
BioArchLinuxBot
|
2024-05-10 12:10 (UTC) |
|
r-htsfilter
|
1.44.0-1 |
0 |
0.00
|
Filter replicated high-throughput transcriptome sequencing data |
BioArchLinuxBot
|
2024-05-02 22:09 (UTC) |
|
r-htscluster
|
2.0.11-1 |
0 |
0.00
|
Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
BioArchLinuxBot
|
2023-09-05 12:04 (UTC) |
|
r-hapfabia
|
1.46.0-1 |
0 |
0.00
|
hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data |
BioArchLinuxBot
|
2024-05-01 18:45 (UTC) |
|
r-gpart
|
1.13.0-4 |
0 |
0.00
|
Human genome partitioning of dense sequencing data by identifying haplotype blocks |
BioArchLinuxBot
|
2022-11-04 06:30 (UTC) |
|
r-genomicplot
|
1.2.1-1 |
0 |
0.00
|
Plot profiles of next generation sequencing data in genomic features |
pekkarr
|
2024-05-15 18:06 (UTC) |
|
r-genomes
|
3.34.0-1 |
0 |
0.00
|
Genome sequencing project metadata |
BioArchLinuxBot
|
2024-05-01 20:03 (UTC) |
|
r-fccac
|
1.30.0-1 |
0 |
0.00
|
functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets |
BioArchLinuxBot
|
2024-05-03 05:17 (UTC) |
|
r-exomecopy
|
1.48.0-1 |
0 |
0.00
|
Copy number variant detection from exome sequencing read depth |
BioArchLinuxBot
|
2023-10-26 03:16 (UTC) |
|
r-dss
|
2.52.0-1 |
0 |
0.00
|
Dispersion shrinkage for sequencing data |
BioArchLinuxBot
|
2024-05-03 04:31 (UTC) |
|
r-drimpute
|
1.0-4 |
0 |
0.00
|
Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
BioArchLinuxBot
|
2022-06-06 00:34 (UTC) |
|
r-dnafusion
|
1.6.0-1 |
0 |
0.00
|
Identification of gene fusions using paired-end sequencing |
pekkarr
|
2024-05-03 02:54 (UTC) |
|
r-dnabarcodes
|
1.34.0-1 |
0 |
0.00
|
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments |
BioArchLinuxBot
|
2024-05-02 04:44 (UTC) |
|
r-dnabarcodecompatibility
|
1.20.0-1 |
0 |
0.00
|
A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms |
BioArchLinuxBot
|
2024-05-01 20:10 (UTC) |
|
r-dmrseq
|
1.24.0-1 |
0 |
0.00
|
Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing |
BioArchLinuxBot
|
2024-05-03 05:32 (UTC) |
|
r-dmrcate
|
3.0.0-1 |
0 |
0.00
|
Methylation array and sequencing spatial analysis methods |
BioArchLinuxBot
|
2024-05-07 00:02 (UTC) |
|
r-dittoseq
|
1.16.0-1 |
0 |
0.00
|
User Friendly Single-Cell and Bulk RNA Sequencing Visualization |
BioArchLinuxBot
|
2024-05-02 21:19 (UTC) |
|
r-dino
|
1.10.0-1 |
0 |
0.00
|
Normalization of Single-Cell mRNA Sequencing Data |
BioArchLinuxBot
|
2024-05-03 01:36 (UTC) |
|
r-deepsnv
|
1.50.0-1 |
0 |
0.00
|
Detection of subclonal SNVs in deep sequencing data. |
BioArchLinuxBot
|
2024-05-03 04:39 (UTC) |
|
r-decontam
|
1.24.0-1 |
0 |
0.00
|
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data |
BioArchLinuxBot
|
2024-05-01 20:15 (UTC) |
|
r-dasper
|
1.9.0-3 |
0 |
0.00
|
Detecting abberant splicing events from RNA-sequencing data |
BioArchLinuxBot
|
2024-04-27 20:34 (UTC) |