|
r-ppcseq
|
1.10.0-5 |
0 |
0.00
|
Probabilistic Outlier Identification for RNA Sequencing Generalized Linear Models |
BioArchLinuxBot
|
2024-02-08 12:42 (UTC) |
|
r-poiclaclu
|
1.0.2.1-10 |
0 |
0.00
|
Classification and Clustering of Sequencing Data Based on a Poisson Model |
BioArchLinuxBot
|
2024-04-24 20:41 (UTC) |
|
r-nbpseq
|
0.3.1-1 |
0 |
0.00
|
Negative Binomial Models for RNA-Sequencing Data |
BioArchLinuxBot
|
2022-06-09 13:04 (UTC) |
|
r-nanomethviz
|
2.8.1-1 |
0 |
0.00
|
Visualise methlation data from Oxford Nanopore sequencing |
BioArchLinuxBot
|
2023-11-10 00:08 (UTC) |
|
r-nadfinder
|
1.26.0-1 |
0 |
0.00
|
Call wide peaks for sequencing data |
BioArchLinuxBot
|
2023-10-27 15:47 (UTC) |
|
r-msgbsr
|
1.26.0-1 |
0 |
0.00
|
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions |
BioArchLinuxBot
|
2023-10-27 15:27 (UTC) |
|
r-mpfe
|
1.38.0-2 |
0 |
0.00
|
Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data |
BioArchLinuxBot
|
2024-03-30 00:03 (UTC) |
|
r-methylkit
|
1.28.0-1 |
0 |
0.00
|
DNA methylation analysis from high-throughput bisulfite sequencing results |
BioArchLinuxBot
|
2023-10-27 09:18 (UTC) |
|
r-methtargetedngs
|
1.34.0-1 |
0 |
0.00
|
Perform Methylation Analysis on Next Generation Sequencing Data |
BioArchLinuxBot
|
2023-10-26 03:03 (UTC) |
|
r-methrix
|
1.16.0-1 |
0 |
0.00
|
Fast and efficient summarization of generic bedGraph files from Bisufite sequencing |
BioArchLinuxBot
|
2023-10-27 11:17 (UTC) |
|
r-methinheritsim
|
1.24.0-1 |
0 |
0.00
|
Simulating Whole-Genome Inherited Bisulphite Sequencing Data |
BioArchLinuxBot
|
2023-10-27 11:43 (UTC) |
|
r-methcp
|
1.13.0-1 |
0 |
0.00
|
Differential methylation anlsysis for bisulfite sequencing data |
BioArchLinuxBot
|
2023-04-27 22:22 (UTC) |
|
r-metagenomeseq
|
1.43.0-1 |
0 |
0.00
|
Statistical analysis for sparse high-throughput sequencing |
BioArchLinuxBot
|
2023-10-26 06:59 (UTC) |
|
r-mdts
|
1.22.0-1 |
0 |
0.00
|
Detection of de novo deletion in targeted sequencing trios |
BioArchLinuxBot
|
2023-10-27 07:31 (UTC) |
|
r-madseq
|
1.28.0-1 |
0 |
0.00
|
Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data |
BioArchLinuxBot
|
2023-10-27 12:56 (UTC) |
|
r-lymphoseq
|
1.30.0-1 |
0 |
0.00
|
Analyze high-throughput sequencing of T and B cell receptors |
BioArchLinuxBot
|
2023-10-26 03:38 (UTC) |
|
r-lineagespot
|
1.6.0-1 |
0 |
0.00
|
Detection of SARS-CoV-2 lineages in wastewater samples using next-generation sequencing |
pekkarr
|
2023-12-10 11:32 (UTC) |
|
r-katdetectr
|
1.4.0-1 |
0 |
0.00
|
Detection, Characterization and Visualization of Kataegis in Sequencing Data |
pekkarr
|
2023-12-01 11:28 (UTC) |
|
r-isanalytics
|
1.12.0-1 |
0 |
0.00
|
Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies |
BioArchLinuxBot
|
2023-10-25 21:26 (UTC) |
|
r-iaseq
|
1.46.0-2 |
0 |
0.00
|
integrating multiple sequencing datasets for detecting allele-specific events |
BioArchLinuxBot
|
2024-03-29 18:03 (UTC) |
|
r-humantranscriptomecompendium
|
1.17.0-1 |
0 |
0.00
|
Tools to work with a Compendium of 181000 human transcriptome sequencing studies |
BioArchLinuxBot
|
2023-11-02 18:09 (UTC) |
|
r-htsfilter
|
1.42.0-1 |
0 |
0.00
|
Filter replicated high-throughput transcriptome sequencing data |
BioArchLinuxBot
|
2023-10-27 08:34 (UTC) |
|
r-htscluster
|
2.0.11-1 |
0 |
0.00
|
Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
BioArchLinuxBot
|
2023-09-05 12:04 (UTC) |
|
r-hapfabia
|
1.44.0-1 |
0 |
0.00
|
hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing data |
BioArchLinuxBot
|
2023-10-26 00:48 (UTC) |
|
r-gpart
|
1.13.0-4 |
0 |
0.00
|
Human genome partitioning of dense sequencing data by identifying haplotype blocks |
BioArchLinuxBot
|
2022-11-04 06:30 (UTC) |
|
r-genomicplot
|
1.0.8-1 |
0 |
0.00
|
Plot profiles of next generation sequencing data in genomic features |
pekkarr
|
2024-04-11 18:22 (UTC) |
|
r-genomes
|
3.32.0-1 |
0 |
0.00
|
Genome sequencing project metadata |
BioArchLinuxBot
|
2023-10-25 20:37 (UTC) |
|
r-fccac
|
1.28.0-1 |
0 |
0.00
|
functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets |
BioArchLinuxBot
|
2023-10-27 13:09 (UTC) |
|
r-exomecopy
|
1.48.0-1 |
0 |
0.00
|
Copy number variant detection from exome sequencing read depth |
BioArchLinuxBot
|
2023-10-26 03:16 (UTC) |
|
r-dss
|
2.50.1-1 |
0 |
0.00
|
Dispersion shrinkage for sequencing data |
BioArchLinuxBot
|
2024-01-13 00:03 (UTC) |
|
r-drimpute
|
1.0-4 |
0 |
0.00
|
Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
BioArchLinuxBot
|
2022-06-06 00:34 (UTC) |
|
r-dnafusion
|
1.4.0-1 |
0 |
0.00
|
Identification of gene fusions using paired-end sequencing |
pekkarr
|
2023-11-30 13:35 (UTC) |
|
r-dnabarcodes
|
1.32.0-2 |
0 |
0.00
|
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments |
BioArchLinuxBot
|
2024-04-25 02:27 (UTC) |
|
r-dnabarcodecompatibility
|
1.18.0-1 |
0 |
0.00
|
A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms |
BioArchLinuxBot
|
2023-10-25 22:06 (UTC) |
|
r-dmrseq
|
1.22.1-1 |
0 |
0.00
|
Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing |
BioArchLinuxBot
|
2024-02-22 00:05 (UTC) |
|
r-dmrcate
|
2.16.1-1 |
0 |
0.00
|
Methylation array and sequencing spatial analysis methods |
BioArchLinuxBot
|
2023-12-07 00:04 (UTC) |
|
r-dittoseq
|
1.14.3-1 |
0 |
0.00
|
User Friendly Single-Cell and Bulk RNA Sequencing Visualization |
BioArchLinuxBot
|
2024-03-25 18:08 (UTC) |
|
r-dino
|
1.8.0-1 |
0 |
0.00
|
Normalization of Single-Cell mRNA Sequencing Data |
BioArchLinuxBot
|
2023-10-31 18:52 (UTC) |
|
r-deepsnv
|
1.48.0-1 |
0 |
0.00
|
Detection of subclonal SNVs in deep sequencing data. |
BioArchLinuxBot
|
2023-10-27 12:31 (UTC) |
|
r-decontam
|
1.22.0-1 |
0 |
0.00
|
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data |
BioArchLinuxBot
|
2023-10-25 20:46 (UTC) |
|
r-dasper
|
1.9.0-1 |
0 |
0.00
|
Detecting abberant splicing events from RNA-sequencing data |
BioArchLinuxBot
|
2023-04-27 18:54 (UTC) |
|
r-dada2
|
1.30.0-1 |
0 |
0.00
|
Accurate, high-resolution sample inference from amplicon sequencing data |
greyltc
|
2023-11-02 09:37 (UTC) |
|
r-cummerbund
|
2.44.0-1 |
0 |
0.00
|
Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data. |
BioArchLinuxBot
|
2023-10-27 15:07 (UTC) |
|
r-coseq
|
1.26.0-1 |
0 |
0.00
|
Co-Expression Analysis of Sequencing Data |
BioArchLinuxBot
|
2023-10-27 10:03 (UTC) |
|
r-codex
|
1.34.0-1 |
0 |
0.00
|
A Normalization and Copy Number Variation Detection Method for Whole Exome Sequencing |
BioArchLinuxBot
|
2023-10-27 11:32 (UTC) |
|
r-cnvrd2
|
1.40.0-1 |
0 |
0.00
|
CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data. |
BioArchLinuxBot
|
2023-10-27 12:54 (UTC) |
|
r-cnvpanelizer
|
1.34.0-1 |
0 |
0.00
|
Reliable CNV detection in targeted sequencing applications |
BioArchLinuxBot
|
2023-10-26 03:45 (UTC) |
|
r-clusterseq
|
1.26.0-1 |
0 |
0.00
|
Clustering of high-throughput sequencing data by identifying co-expression patterns |
BioArchLinuxBot
|
2023-10-26 07:24 (UTC) |
|
r-clusterexperiment
|
2.22.0-2 |
0 |
0.00
|
Compare Clusterings for Single-Cell Sequencing |
BioArchLinuxBot
|
2024-04-15 18:32 (UTC) |
|
r-chipseqr
|
1.56.0-1 |
0 |
0.00
|
Identifying Protein Binding Sites in High-Throughput Sequencing Data |
BioArchLinuxBot
|
2023-10-27 09:47 (UTC) |