2297 packages found. Page 1 of 46.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-similarpeak 1.36.0-1 0 0.00 Metrics to estimate a level of similarity between two ChIP-Seq profiles BioArchLinuxBot 2024-05-02 04:27 (UTC)
r-mpfe 1.40.0-1 0 0.00 Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data BioArchLinuxBot 2024-05-02 04:18 (UTC)
r-lbe 1.72.0-1 0 0.00 Estimation of the false discovery rate BioArchLinuxBot 2024-05-02 04:05 (UTC)
r-calm 1.18.0-1 0 0.00 Covariate Assisted Large-scale Multiple testing BioArchLinuxBot 2024-05-02 04:00 (UTC)
r-isolde 1.32.0-1 0 0.00 Integrative Statistics of alleLe Dependent Expression BioArchLinuxBot 2024-05-02 04:00 (UTC)
r-multimed 2.26.0-1 0 0.00 Testing multiple biological mediators simultaneously BioArchLinuxBot 2024-05-02 03:59 (UTC)
r-swfdr 1.30.0-1 0 0.00 Estimation of the science-wise false discovery rate and the false discovery rate conditional on covariates BioArchLinuxBot 2024-05-02 03:55 (UTC)
r-measurementerror.cor 1.76.0-1 0 0.00 Measurement Error model estimate for correlation coefficient BioArchLinuxBot 2024-05-02 03:41 (UTC)
r-chopsticks 1.70.0-1 0 0.00 The 'snp.matrix' and 'X.snp.matrix' Classes BioArchLinuxBot 2024-05-02 03:32 (UTC)
r-asafe 1.30.0-1 0 0.00 Ancestry Specific Allele Frequency Estimation BioArchLinuxBot 2024-05-02 03:28 (UTC)
r-matchbox 1.46.0-1 0 0.00 Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis BioArchLinuxBot 2024-05-02 03:22 (UTC)
r-cfassay 1.38.0-1 0 0.00 Statistical analysis for the Colony Formation Assay BioArchLinuxBot 2024-05-02 03:21 (UTC)
r-metacca 1.32.0-1 0 0.00 Summary Statistics-Based Multivariate Meta-Analysis of Genome-Wide Association Studies Using Canonical Correlation Analysis BioArchLinuxBot 2024-05-02 03:17 (UTC)
r-scbn 1.22.0-1 0 0.00 A statistical normalization method and differential expression analysis for RNA-seq data between different species BioArchLinuxBot 2024-05-02 03:14 (UTC)
r-flowworkspacedata 3.15.0-1 0 0.00 A data package containing two flowJo, one diva xml workspace and the associated fcs files as well as three GatingSets for testing the flowWorkspace, openCyto and CytoML packages pekkarr 2024-05-02 03:11 (UTC)
r-tximport 1.32.0-1 0 0.00 Import and summarize transcript-level estimates for transcript- and gene-level analysis BioArchLinuxBot 2024-05-02 03:05 (UTC)
r-rnainteract 1.52.0-1 0 0.00 Estimate Pairwise Interactions from multidimensional features BioArchLinuxBot 2024-05-02 03:01 (UTC)
r-lrcell 1.12.0-1 0 0.00 Differential cell type change analysis using Logistic/linear Regression BioArchLinuxBot 2024-05-02 02:56 (UTC)
r-props 1.26.0-1 0 0.00 PRObabilistic Pathway Score (PROPS) BioArchLinuxBot 2024-05-02 02:46 (UTC)
r-promise 1.56.0-1 0 0.00 PRojection Onto the Most Interesting Statistical Evidence BioArchLinuxBot 2024-05-02 02:32 (UTC)
r-ace 1.22.0-1 0 0.00 Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing BioArchLinuxBot 2024-05-02 02:30 (UTC)
r-genesis 2.34.0-1 0 0.00 GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness BioArchLinuxBot 2024-05-02 02:29 (UTC)
r-globaltest 5.58.0-1 0 0.00 Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing BioArchLinuxBot 2024-05-02 02:04 (UTC)
r-siamcat 2.8.0-1 0 0.00 Statistical Inference of Associations between Microbial Communities And host phenoTypes BioArchLinuxBot 2024-05-02 01:44 (UTC)
r-rpa 1.60.0-1 0 0.00 RPA: Robust Probabilistic Averaging for probe-level analysis BioArchLinuxBot 2024-05-02 01:42 (UTC)
r-targetdecoy 1.10.0-1 0 0.00 Diagnostic Plots to Evaluate the Target Decoy Approach BioArchLinuxBot 2024-05-02 01:09 (UTC)
r-sitepath 1.20.0-1 0 0.00 Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations BioArchLinuxBot 2024-05-02 01:07 (UTC)
r-cardinal 3.6.0-1 0 0.00 A mass spectrometry imaging toolbox for statistical analysis BioArchLinuxBot 2024-05-02 01:01 (UTC)
r-msstatsptm 2.6.0-1 0 0.00 Statistical Characterization of Post-translational Modifications BioArchLinuxBot 2024-05-02 00:59 (UTC)
r-scpca 1.18.0-1 0 0.00 Sparse Contrastive Principal Component Analysis BioArchLinuxBot 2024-05-02 00:48 (UTC)
r-genegeneinter 1.30.0-1 0 0.00 Tools for Testing Gene-Gene Interaction at the Gene Level BioArchLinuxBot 2024-05-02 00:38 (UTC)
r-parglms 1.36.0-1 0 0.00 support for parallelized estimation of GLMs/GEEs BioArchLinuxBot 2024-05-01 23:50 (UTC)
r-gsgalgor 1.14.0-1 0 0.00 An Evolutionary Framework for the Identification and Study of Prognostic Gene Expression Signatures in Cancer BioArchLinuxBot 2024-05-01 23:42 (UTC)
r-cellmigration 1.12.0-1 0 0.00 Track Cells, Analyze Cell Trajectories and Compute Migration Statistics BioArchLinuxBot 2024-05-01 23:38 (UTC)
r-sights 1.30.0-1 0 0.00 Statistics and dIagnostic Graphs for HTS BioArchLinuxBot 2024-05-01 23:26 (UTC)
r-flowstats 4.16.0-1 0 0.00 Statistical methods for the analysis of flow cytometry data BioArchLinuxBot 2024-05-01 23:08 (UTC)
r-stattarget 1.34.0-1 0 0.00 Statistical Analysis of Molecular Profiles BioArchLinuxBot 2024-05-01 23:03 (UTC)
r-simd 1.22.0-1 0 0.00 Statistical Inferences with MeDIP-seq Data (SIMD) to infer the methylation level for each CpG site BioArchLinuxBot 2024-05-01 23:03 (UTC)
r-trio 3.42.0-1 0 0.00 Testing of SNPs and SNP Interactions in Case-Parent Trio Studies BioArchLinuxBot 2024-05-01 22:57 (UTC)
r-metagenomeseq 1.46.0-1 0 0.00 Statistical analysis for sparse high-throughput sequencing BioArchLinuxBot 2024-05-01 22:55 (UTC)
r-timecourse 1.76.0-1 0 0.00 Statistical Analysis for Developmental Microarray Time Course Data BioArchLinuxBot 2024-05-01 22:50 (UTC)
r-iwtomics 1.28.0-1 0 0.00 Interval-Wise Testing for Omics Data BioArchLinuxBot 2024-05-01 22:24 (UTC)
r-pepstat 1.38.0-1 0 0.00 Statistical analysis of peptide microarrays BioArchLinuxBot 2024-05-01 22:18 (UTC)
r-csar 1.56.0-1 0 0.00 Statistical tools for the analysis of ChIP-seq data BioArchLinuxBot 2024-05-01 22:11 (UTC)
r-ggpa 1.16.0-1 0 0.00 graph-GPA: A graphical model for prioritizing GWAS results and investigating pleiotropic architecture BioArchLinuxBot 2024-05-01 21:56 (UTC)
r-sparsenetgls 1.22.0-1 0 0.00 Using Gaussian graphical structue learning estimation in generalized least squared regression for multivariate normal regression BioArchLinuxBot 2024-05-01 21:52 (UTC)
r-plotgrouper 1.22.0-1 0 0.00 Shiny app GUI wrapper for ggplot with built-in statistical analysis BioArchLinuxBot 2024-05-01 21:40 (UTC)
r-icare 1.32.0-1 0 0.00 A Tool for Individualized Coherent Absolute Risk Estimation (iCARE) BioArchLinuxBot 2024-05-01 21:39 (UTC)
r-coveb 1.30.0-1 0 0.00 Empirical Bayes estimate of block diagonal covariance matrices BioArchLinuxBot 2024-05-01 21:32 (UTC)
r-geneplast 1.30.0-1 0 0.00 Evolutionary and plasticity analysis of orthologous groups BioArchLinuxBot 2024-05-01 21:26 (UTC)

2297 packages found. Page 1 of 46.

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