r-emmeans
|
1.10.2-1 |
0 |
0.00
|
Estimated Marginal Means, aka Least-Squares Means |
BioArchLinuxBot
|
2024-05-20 12:01 (UTC) |
r-eir
|
1.44.0-1 |
0 |
0.00
|
Accelerated similarity searching of small molecules |
BioArchLinuxBot
|
2024-05-01 21:44 (UTC) |
r-doubletrouble
|
1.4.0-1 |
0 |
0.00
|
Identification and classification of duplicated genes |
pekkarr
|
2024-05-05 18:13 (UTC) |
r-dmrseq
|
1.24.0-1 |
0 |
0.00
|
Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing |
BioArchLinuxBot
|
2024-05-03 05:32 (UTC) |
r-dmrscan
|
1.26.0-1 |
0 |
0.00
|
Detection of Differentially Methylated Regions |
BioArchLinuxBot
|
2024-05-01 22:19 (UTC) |
r-dmrforpairs
|
1.35.0-2 |
0 |
0.00
|
identifying Differentially Methylated Regions between unique samples using array based methylation profiles |
BioArchLinuxBot
|
2024-02-11 18:14 (UTC) |
r-dmrcaller
|
1.36.0-1 |
0 |
0.00
|
Differentially Methylated Regions caller |
BioArchLinuxBot
|
2024-05-01 22:17 (UTC) |
r-dmchmm
|
1.26.0-1 |
0 |
0.00
|
Differentially Methylated CpG using Hidden Markov Model |
BioArchLinuxBot
|
2024-05-03 01:10 (UTC) |
r-dmcfb
|
1.18.0-1 |
0 |
0.00
|
Differentially Methylated Cytosines via a Bayesian Functional Approach |
BioArchLinuxBot
|
2024-05-03 01:07 (UTC) |
r-distr
|
2.9.3-1 |
0 |
0.00
|
Object Oriented Implementation of Distributions |
BioArchLinuxBot
|
2024-01-30 01:13 (UTC) |
r-diptest
|
0.77.1-1 |
0 |
0.00
|
Hartigan's Dip Test Statistic for Unimodality - Corrected |
BioArchLinuxBot
|
2024-04-11 00:01 (UTC) |
r-differentialregulation
|
2.2.0-1 |
0 |
0.00
|
Differentially regulated genes from scRNA-seq data |
pekkarr
|
2024-05-02 21:45 (UTC) |
r-deprecated-215
|
215-3 |
2 |
0.00
|
Language and environment for statistical computing and graphics - deprecated version (2.15.3) |
daroczig
|
2015-06-22 04:29 (UTC) |
r-dbscan
|
1.1.12-1 |
0 |
0.00
|
Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms |
BioArchLinuxBot
|
2023-11-28 18:20 (UTC) |
r-damefinder
|
1.16.0-1 |
0 |
0.00
|
Finds DAMEs - Differential Allelicly MEthylated regions |
BioArchLinuxBot
|
2024-05-03 05:11 (UTC) |
r-cytometree
|
2.0.2-4 |
0 |
0.00
|
Automated Cytometry Gating and Annotation |
BioArchLinuxBot
|
2022-06-05 23:33 (UTC) |
r-cytolib
|
2.16.0-1 |
0 |
0.00
|
C++ infrastructure for representing and interacting with the gated cytometry data |
BioArchLinuxBot
|
2024-05-02 05:12 (UTC) |
r-cvauc
|
1.1.4-3 |
0 |
0.00
|
Cross-Validated Area Under the ROC Curve Confidence Intervals |
BioArchLinuxBot
|
2022-06-06 16:23 (UTC) |
r-cvar
|
0.5-1 |
0 |
0.00
|
Compute Expected Shortfall and Value at Risk for Continuous Distributions |
BioArchLinuxBot
|
2022-11-13 02:53 (UTC) |
r-curatedtcgadata
|
1.26.0-1 |
0 |
0.00
|
Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects |
BioArchLinuxBot
|
2024-05-03 08:27 (UTC) |
r-cosmosr
|
1.12.0-1 |
0 |
0.00
|
COSMOS (Causal Oriented Search of Multi-Omic Space) |
BioArchLinuxBot
|
2024-05-03 18:51 (UTC) |
r-corncob
|
0.4.1-2 |
0 |
0.00
|
Count Regression for Correlated Observations with the Beta-Binomial |
BioArchLinuxBot
|
2024-02-16 00:28 (UTC) |
r-coregnet
|
1.38.0-2 |
0 |
0.00
|
reconstruction and integrated analysis of co-regulatory networks |
BioArchLinuxBot
|
2024-02-12 12:06 (UTC) |
r-conflicted
|
1.2.0-1 |
0 |
0.00
|
An Alternative Conflict Resolution Strategy |
BioArchLinuxBot
|
2023-02-25 12:01 (UTC) |
r-compspot
|
1.2.0-1 |
0 |
0.00
|
Tool for identifying and comparing significantly mutated genomic hotspots |
pekkarr
|
2024-05-02 05:00 (UTC) |
r-comethdmr
|
1.8.0-1 |
0 |
0.00
|
Accurate identification of co-methylated and differentially methylated regions in epigenome-wide association studies |
pekkarr
|
2024-05-03 14:25 (UTC) |
r-combinepvalue
|
1.0-4 |
0 |
0.00
|
Combine a Vector of Correlated p-values |
BioArchLinuxBot
|
2022-06-07 13:12 (UTC) |
r-cohcap
|
1.48.0-2 |
0 |
0.00
|
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data |
BioArchLinuxBot
|
2024-04-25 05:25 (UTC) |
r-cogito
|
1.10.0-1 |
0 |
0.00
|
Compare genomic intervals tool - Automated, complete, reproducible and clear report about genomic and epigenomic data sets |
BioArchLinuxBot
|
2024-05-03 02:44 (UTC) |
r-cogaps
|
3.24.0-1 |
0 |
0.00
|
Coordinated Gene Activity in Pattern Sets |
BioArchLinuxBot
|
2024-05-04 12:08 (UTC) |
r-cnvpanelizer
|
1.36.0-1 |
0 |
0.00
|
Reliable CNV detection in targeted sequencing applications |
BioArchLinuxBot
|
2024-05-02 00:44 (UTC) |
r-clustersignificance
|
1.32.0-1 |
0 |
0.00
|
The ClusterSignificance package provides tools to assess if class clusters in dimensionality reduced data representations have a separation different from permuted data |
BioArchLinuxBot
|
2024-05-01 18:56 (UTC) |
r-cleanupdtseq
|
1.42.0-1 |
0 |
0.00
|
cleanUpdTSeq cleans up artifacts from polyadenylation sites from oligo(dT)-mediated 3' end RNA sequending data |
BioArchLinuxBot
|
2024-05-03 03:28 (UTC) |
r-classifyr
|
3.8.0-1 |
0 |
0.00
|
A framework for cross-validated classification problems, with applications to differential variability and differential distribution testing |
BioArchLinuxBot
|
2024-05-03 12:58 (UTC) |
r-chronos
|
1.32.0-1 |
0 |
0.00
|
CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis |
BioArchLinuxBot
|
2024-05-02 23:09 (UTC) |
r-cbaf
|
1.26.3-1 |
0 |
0.00
|
Automated functions for comparing various omic data from cbioportal.org |
BioArchLinuxBot
|
2024-06-08 00:04 (UTC) |
r-camera
|
1.60.0-1 |
0 |
0.00
|
Collection of annotation related methods for mass spectrometry data |
BioArchLinuxBot
|
2024-05-03 13:35 (UTC) |
r-calm
|
1.18.0-1 |
0 |
0.00
|
Covariate Assisted Large-scale Multiple testing |
BioArchLinuxBot
|
2024-05-02 04:00 (UTC) |
r-caic4
|
1.0-1 |
0 |
0.00
|
Provides functions for the estimation of the conditional Akaike information in generalized mixed-effect models fitted with (g)lmer() from 'lme4', lme() from 'nlme' and gamm() from 'mgcv'. |
serene-arc
|
2024-05-16 04:04 (UTC) |
r-bufferedmatrixmethods
|
1.68.0-1 |
0 |
0.00
|
Microarray Data related methods that utlize BufferedMatrix objects |
BioArchLinuxBot
|
2024-05-02 05:15 (UTC) |
r-boom
|
0.9.15-1 |
0 |
0.00
|
Bayesian Object Oriented Modeling |
BioArchLinuxBot
|
2024-02-04 00:06 (UTC) |
r-birewire
|
3.36.0-1 |
0 |
0.00
|
High-performing routines for the randomization of a bipartite graph (or a binary event matrix), undirected and directed signed graph preserving degree distribution (or marginal totals) |
BioArchLinuxBot
|
2024-05-01 21:31 (UTC) |
r-biotmle
|
1.28.0-1 |
0 |
0.00
|
Targeted Learning with Moderated Statistics for Biomarker Discovery |
BioArchLinuxBot
|
2024-05-02 19:36 (UTC) |
r-binr
|
1.1.1-5 |
0 |
0.00
|
Cut Numeric Values into Evenly Distributed Groups |
BioArchLinuxBot
|
2024-04-24 22:20 (UTC) |
r-bigpint
|
1.15.0-2 |
0 |
0.00
|
Big multivariate data plotted interactively |
BioArchLinuxBot
|
2024-02-12 12:15 (UTC) |
r-awfisher
|
1.18.0-1 |
0 |
0.00
|
An R package for fast computing for adaptively weighted fisher's method |
BioArchLinuxBot
|
2024-05-01 18:57 (UTC) |
r-autotuner
|
1.10.0-5 |
0 |
0.00
|
Automated parameter selection for untargeted metabolomics data processing |
BioArchLinuxBot
|
2022-11-04 06:13 (UTC) |
r-aseb
|
1.48.0-1 |
0 |
0.00
|
Predict Acetylated Lysine Sites |
BioArchLinuxBot
|
2024-05-02 04:05 (UTC) |
r-arrayquality
|
1.82.0-1 |
0 |
0.00
|
Assessing array quality on spotted arrays |
BioArchLinuxBot
|
2024-05-01 22:53 (UTC) |
r-aroma.apd
|
0.7.0-3 |
0 |
0.00
|
A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] |
BioArchLinuxBot
|
2024-04-25 06:24 (UTC) |