cufflinks-bin
|
2.2.1-1 |
2 |
0.00
|
Transcriptome assembly and differential expression analysis for RNA-Seq. |
vejnar
|
2022-08-03 12:49 (UTC) |
phast
|
1.6-1 |
1 |
0.00
|
Phylogenetic analysis with space/time models |
vejnar
|
2022-07-27 02:57 (UTC) |
python-fontools
|
0.6.1-1 |
1 |
0.00
|
FONtools: The Feature Object Notation tools |
vejnar
|
2023-03-14 17:37 (UTC) |
python-momoko
|
2.2.5.1-1 |
3 |
0.00
|
Asynchronous Psycopg wrapper for Tornado. |
vejnar
|
2022-07-22 16:23 (UTC) |
python-pyfaidx
|
0.7.2.2-1 |
2 |
0.00
|
Efficient pythonic random access to fasta subsequences. |
vejnar
|
2023-10-19 22:48 (UTC) |
python-pyfnutils
|
1.4-1 |
1 |
0.00
|
Small utility functions for Python: logging, parallel tasks, zstd. |
vejnar
|
2023-03-14 20:01 (UTC) |
rsync-readcap
|
0.2-1 |
1 |
0.00
|
Create copy of rsync with read-everywhere capability under rsyncr user. For pull backups. |
vejnar
|
2022-12-16 16:08 (UTC) |
scratch-purge
|
0.1-1 |
1 |
0.00
|
Simple tool to purge a folder used as scratch. |
vejnar
|
2018-09-01 20:39 (UTC) |
skewer
|
0.2.2-1 |
1 |
0.00
|
A fast and sensitive adapter trimmer for illumina paired-end sequences |
vejnar
|
2022-08-05 01:23 (UTC) |
star-cshl
|
2.7.11b-1 |
6 |
0.00
|
STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays |
vejnar
|
2024-03-07 23:50 (UTC) |
failing-disk-reporter
|
0.5.2-1 |
1 |
0.00
|
Failing Disk Reporter (FDR): Get a report on Matrix or Slack when a drive (HDD or SDD) is failing |
vejnar
|
2023-07-21 22:21 (UTC) |
geneabacus
|
0.2.2-1 |
1 |
0.00
|
Gene counter and profiler. |
vejnar
|
2023-03-14 17:38 (UTC) |
r-deseq2
|
1.42.0-2 |
2 |
0.00
|
Differential gene expression analysis based on the negative binomial distribution. |
vejnar
|
2023-11-26 17:42 (UTC) |
readknead
|
0.1.2-1 |
1 |
0.00
|
Knead your sequencing reads before baking: clips, demultiplexes, filters and trims reads |
vejnar
|
2022-11-22 20:53 (UTC) |
imod-bin
|
4.12.27-1 |
1 |
0.00
|
Image-Processing, Modeling and Display Programs for Tomography and 3D Reconstruction |
vejnar
|
2022-09-01 20:45 (UTC) |
python-labxdb-tools
|
0.7.0-1 |
1 |
0.00
|
LabxDB tools |
vejnar
|
2023-04-03 23:28 (UTC) |
python-labxpipe
|
0.7.1-1 |
1 |
0.00
|
Genomics pipelines |
vejnar
|
2023-10-19 22:49 (UTC) |
python-geneabacus
|
0.3.2-1 |
1 |
0.00
|
Python IO functions for GeneAbacus |
vejnar
|
2023-07-17 21:12 (UTC) |
bowtie2
|
2.5.3-1 |
16 |
0.00
|
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequence. |
vejnar
|
2024-03-16 15:40 (UTC) |
bwa-mem2
|
2.2.1-1 |
1 |
0.00
|
The next version of Burrows-Wheeler Aligner MEM algorithm |
vejnar
|
2023-05-17 01:02 (UTC) |
macs3
|
3.0.0b3-1 |
1 |
0.04
|
MACS -- Model-based Analysis of ChIP-Seq |
vejnar
|
2023-10-20 02:33 (UTC) |