r-plyinteractions
|
1.2.0-1 |
0 |
0.00
|
Extending tidy verbs to genomic interactions |
pekkarr
|
2024-05-03 03:35 (UTC) |
r-plsvarsel
|
0.9.12-1 |
0 |
0.00
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Variable Selection in Partial Least Squares |
BioArchLinuxBot
|
2024-05-22 12:01 (UTC) |
r-plsgenomics
|
1.5.3-1 |
0 |
0.00
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PLS Analyses for Genomics |
BioArchLinuxBot
|
2024-03-28 12:02 (UTC) |
r-pls
|
2.8.3-3 |
0 |
0.00
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Partial Least Squares and Principal Component Regression |
BioArchLinuxBot
|
2024-04-24 19:38 (UTC) |
r-plpe
|
1.64.0-1 |
0 |
0.00
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Local Pooled Error Test for Differential Expression with Paired High-throughput Data |
BioArchLinuxBot
|
2024-05-02 12:34 (UTC) |
r-plottools
|
0.3.0-2 |
0 |
0.00
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Add Continuous Legends to Plots |
BioArchLinuxBot
|
2024-03-16 18:03 (UTC) |
r-plotroc
|
2.3.1-1 |
0 |
0.00
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Generate Useful ROC Curve Charts for Print and Interactive Use |
BioArchLinuxBot
|
2023-10-06 18:05 (UTC) |
r-plotrix
|
3.8.4-3 |
1 |
0.00
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Various Plotting Functions |
BioArchLinuxBot
|
2024-04-24 19:10 (UTC) |
r-plotmo
|
3.6.3-2 |
0 |
0.00
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Plot a Model's Residuals, Response, and Partial Dependence Plots |
BioArchLinuxBot
|
2024-04-12 12:08 (UTC) |
r-plotly
|
4.10.4-1 |
0 |
0.00
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Create Interactive Web Graphics via 'plotly.js' |
BioArchLinuxBot
|
2024-01-14 00:03 (UTC) |
r-plotgrouper
|
1.22.0-1 |
0 |
0.00
|
Shiny app GUI wrapper for ggplot with built-in statistical analysis |
BioArchLinuxBot
|
2024-05-01 21:40 (UTC) |
r-plotgardener
|
1.10.0-1 |
0 |
0.00
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Coordinate-Based Genomic Visualization Package for R |
BioArchLinuxBot
|
2024-05-03 03:31 (UTC) |
r-plot3drgl
|
1.0.4-2 |
0 |
0.00
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Plotting Multi-Dimensional Data - Using 'rgl' |
pekkarr
|
2024-04-25 22:38 (UTC) |
r-plot3d
|
1.4.1-2 |
0 |
0.00
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Plotting Multi-Dimensional Data |
BioArchLinuxBot
|
2024-04-14 12:19 (UTC) |
r-plogr
|
0.2.0-12 |
0 |
0.00
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The 'plog' C++ Logging Library |
pekkarr
|
2024-04-24 18:18 (UTC) |
r-plogo2
|
1.14.0-1 |
0 |
0.00
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Plot Gene Ontology and KEGG pathway Annotation and Abundance |
BioArchLinuxBot
|
2023-10-26 06:03 (UTC) |
r-plm
|
2.6.4-1 |
0 |
0.00
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Linear Models for Panel Data |
pekkarr
|
2024-04-02 00:03 (UTC) |
r-plier
|
1.74.0-1 |
0 |
0.00
|
Implements the Affymetrix PLIER algorithm |
BioArchLinuxBot
|
2024-05-01 22:39 (UTC) |
r-plgem
|
1.76.0-1 |
0 |
0.00
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Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM) |
BioArchLinuxBot
|
2024-05-02 12:24 (UTC) |
r-plethy
|
1.36.0-3 |
0 |
0.00
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R framework for exploration and analysis of respirometry data |
BioArchLinuxBot
|
2024-02-12 12:06 (UTC) |
r-plasmut
|
1.2.0-1 |
0 |
0.00
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Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-planet
|
1.12.0-1 |
0 |
0.00
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Placental DNA methylation analysis tools |
BioArchLinuxBot
|
2024-05-01 20:06 (UTC) |
r-pkgsearch
|
3.1.3-1 |
0 |
0.00
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Search and Query CRAN R Packages |
peippo
|
2023-12-11 12:34 (UTC) |
r-pkgmaker
|
0.32.10-1 |
0 |
0.00
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Development Utilities for R Packages |
BioArchLinuxBot
|
2023-05-03 12:02 (UTC) |
r-pkgkitten
|
0.2.3-1 |
0 |
0.00
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Create Simple Packages Which Do not Upset R Package Checks |
pekkarr
|
2024-03-20 18:02 (UTC) |
r-pkgdown
|
2.0.9-1 |
0 |
0.00
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Make Static HTML Documentation for a Package |
BioArchLinuxBot
|
2024-04-19 01:05 (UTC) |
r-pkgdeptools
|
1.63.0-3 |
0 |
0.00
|
Package Dependency Tools |
BioArchLinuxBot
|
2023-11-05 18:01 (UTC) |
r-pkgdepends
|
0.7.1-1 |
0 |
0.00
|
Cache ‘CRAN’-Like Metadata and R Packages |
peippo
|
2023-12-11 12:39 (UTC) |
r-pkgcache
|
2.2.2-1 |
0 |
0.00
|
Cache ‘CRAN’-Like Metadata and R Packages |
peippo
|
2024-04-09 12:10 (UTC) |
r-pkgbuild
|
1.4.4-1 |
2 |
0.00
|
Find Tools Needed to Build R Packages |
greyltc
|
2024-03-18 08:25 (UTC) |
r-pixmap
|
0.4.13-1 |
0 |
0.00
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Bitmap Images / Pixel Maps |
BioArchLinuxBot
|
2024-05-03 18:20 (UTC) |
r-pipeframe
|
1.20.0-1 |
0 |
0.00
|
Pipeline framework for bioinformatics in R |
BioArchLinuxBot
|
2024-05-03 03:09 (UTC) |
r-pipecomp
|
1.14.0-1 |
0 |
0.00
|
pipeComp pipeline benchmarking framework |
BioArchLinuxBot
|
2024-05-03 01:46 (UTC) |
r-pingr
|
2.0.3-2 |
0 |
0.00
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Check if a Remote Computer is Up |
pekkarr
|
2024-04-25 07:43 (UTC) |
r-ping
|
2.48.0-1 |
0 |
0.00
|
Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data |
BioArchLinuxBot
|
2024-05-03 06:04 (UTC) |
r-pinfsc50
|
1.3.0-2 |
0 |
0.00
|
Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
BioArchLinuxBot
|
2024-03-16 18:08 (UTC) |
r-pigengene
|
1.30.0-1 |
0 |
0.00
|
Infers biological signatures from gene expression data |
BioArchLinuxBot
|
2024-05-03 04:14 (UTC) |
r-pics
|
2.48.0-1 |
0 |
0.00
|
Probabilistic inference of ChIP-seq |
BioArchLinuxBot
|
2024-05-02 23:38 (UTC) |
r-pickgene
|
1.76.0-1 |
0 |
0.00
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Adaptive Gene Picking for Microarray Expression Data Analysis |
BioArchLinuxBot
|
2024-05-02 04:10 (UTC) |
r-picante
|
1.8.2-4 |
0 |
0.00
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Integrating Phylogenies and Ecology |
BioArchLinuxBot
|
2022-06-06 10:30 (UTC) |
r-piano
|
2.20.0-1 |
0 |
0.00
|
Platform for integrative analysis of omics data |
BioArchLinuxBot
|
2024-05-02 02:19 (UTC) |
r-pi
|
2.14.0-2 |
0 |
0.00
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Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level |
BioArchLinuxBot
|
2024-04-15 18:30 (UTC) |
r-phytools
|
2.1.1-2 |
0 |
0.00
|
Phylogenetic Tools for Comparative Biology (and Other Things) |
pekkarr
|
2024-04-25 14:29 (UTC) |
r-phyloseq
|
1.48.0-1 |
0 |
0.00
|
Handling and analysis of high-throughput microbiome census data |
BioArchLinuxBot
|
2024-05-02 00:01 (UTC) |
r-phyloprofile
|
1.16.5-1 |
0 |
0.00
|
PhyloProfile |
BioArchLinuxBot
|
2024-04-18 00:05 (UTC) |
r-phylolm
|
2.6.2-1 |
0 |
0.00
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Phylogenetic Linear Regression |
BioArchLinuxBot
|
2022-06-06 10:28 (UTC) |
r-phylogram
|
2.1.0-4 |
0 |
0.00
|
Dendrograms for Evolutionary Analysis |
BioArchLinuxBot
|
2022-06-06 10:27 (UTC) |
r-phylobase
|
0.8.12-1 |
0 |
0.00
|
Base Package for Phylogenetic Structures and Comparative Data |
BioArchLinuxBot
|
2024-01-30 06:23 (UTC) |
r-phyclust
|
0.1.34-1 |
0 |
0.00
|
Phylogenetic Clustering (Phyloclustering) |
BioArchLinuxBot
|
2023-09-06 06:07 (UTC) |
r-phosr
|
1.14.0-1 |
0 |
0.00
|
A set of methods and tools for comprehensive analysis of phosphoproteomics data |
BioArchLinuxBot
|
2024-05-02 19:08 (UTC) |
r-phosphoricons
|
0.2.1-1 |
0 |
0.00
|
'Phosphor' Icons for R |
BioArchLinuxBot
|
2024-04-08 12:01 (UTC) |
r-phosphonormalizer
|
1.28.0-1 |
0 |
0.00
|
Compensates for the bias introduced by median normalization in |
BioArchLinuxBot
|
2024-05-01 19:10 (UTC) |
r-phipdata
|
1.12.0-1 |
0 |
0.00
|
Container for PhIP-Seq Experiments |
BioArchLinuxBot
|
2024-05-02 20:10 (UTC) |
r-philr
|
1.30.0-1 |
0 |
0.00
|
Phylogenetic partitioning based ILR transform for metagenomics data |
BioArchLinuxBot
|
2024-05-02 01:08 (UTC) |
r-philentropy
|
0.8.0-1 |
0 |
0.00
|
Similarity and Distance Quantification Between Probability Functions |
BioArchLinuxBot
|
2023-12-02 18:03 (UTC) |
r-phenstat
|
2.40.0-1 |
0 |
0.00
|
Statistical analysis of phenotypic data |
BioArchLinuxBot
|
2024-05-01 20:40 (UTC) |
r-phenotest
|
1.52.0-1 |
0 |
0.00
|
Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2024-05-03 13:09 (UTC) |
r-phenopath
|
1.28.0-1 |
0 |
0.00
|
Genomic trajectories with heterogeneous genetic and environmental backgrounds |
BioArchLinuxBot
|
2024-05-02 19:44 (UTC) |
r-phenomis
|
1.6.0-1 |
0 |
0.00
|
Postprocessing and univariate analysis of omics data |
pekkarr
|
2024-05-03 00:35 (UTC) |
r-phenogeneranker
|
1.12.0-1 |
0 |
0.00
|
PhenoGeneRanker: A gene and phenotype prioritization tool |
BioArchLinuxBot
|
2024-05-01 23:41 (UTC) |
r-phemd
|
1.18.0-2 |
0 |
0.00
|
Phenotypic EMD for comparison of single-cell samples |
BioArchLinuxBot
|
2024-04-28 18:00 (UTC) |
r-pheatmap
|
1.0.12-4 |
0 |
0.00
|
Pretty Heatmaps |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phater
|
1.0.7-3 |
0 |
0.00
|
PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phastcons100way.ucsc.hg38
|
3.7.1-3 |
0 |
0.00
|
UCSC phastCons conservation scores for hg38 |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phastcons100way.ucsc.hg19
|
3.7.2-3 |
0 |
0.00
|
UCSC phastCons conservation scores for hg19 |
BioArchLinuxBot
|
2022-06-06 10:20 (UTC) |
r-pharmacogx
|
3.8.0-1 |
0 |
0.00
|
Analysis of Large-Scale Pharmacogenomic Data |
BioArchLinuxBot
|
2024-05-03 00:40 (UTC) |
r-phantasuslite
|
1.2.0-1 |
0 |
0.00
|
Loading and annotation RNA-seq counts matrices |
pekkarr
|
2024-05-08 18:03 (UTC) |
r-phantasus
|
1.24.0-1 |
0 |
0.00
|
Visual and interactive gene expression analysis |
BioArchLinuxBot
|
2024-05-08 18:13 (UTC) |
r-phangorn
|
2.11.1-3 |
0 |
0.00
|
Phylogenetic Reconstruction and Analysis |
BioArchLinuxBot
|
2023-02-09 18:07 (UTC) |
r-pgca
|
1.28.0-1 |
0 |
0.00
|
An Algorithm to Link Protein Groups Created from MS/MS Data |
BioArchLinuxBot
|
2024-05-02 04:07 (UTC) |
r-pfp
|
1.7.0-2 |
0 |
0.00
|
Pathway Fingerprint Framework in R |
BioArchLinuxBot
|
2024-02-13 18:06 (UTC) |
r-pfamanalyzer
|
1.4.0-1 |
0 |
0.00
|
Identification of domain isotypes in pfam data |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-pfam.db
|
3.19.1-1 |
0 |
0.00
|
A set of protein ID mappings for PFAM |
BioArchLinuxBot
|
2024-05-03 18:09 (UTC) |
r-permute
|
0.9.7-13 |
0 |
0.00
|
Functions for Generating Restricted Permutations of Data |
BioArchLinuxBot
|
2024-04-24 19:21 (UTC) |
r-periodicdna
|
1.14.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2024-05-03 03:08 (UTC) |
r-performanceanalytics
|
2.0.4-4 |
0 |
0.00
|
Econometric Tools for Performance and Risk Analysis |
BioArchLinuxBot
|
2022-06-06 10:16 (UTC) |
r-performance
|
0.11.0-1 |
0 |
0.00
|
Assessment of Regression Models Performance |
BioArchLinuxBot
|
2024-03-23 12:13 (UTC) |
r-perfect
|
1.16.0-1 |
0 |
0.00
|
Permutation filtration for microbiome data |
BioArchLinuxBot
|
2024-04-13 18:10 (UTC) |
r-pepxmltab
|
1.38.0-1 |
0 |
0.00
|
Parsing pepXML files and filter based on peptide FDR |
BioArchLinuxBot
|
2024-05-02 04:34 (UTC) |
r-peptides
|
2.4.6-1 |
0 |
0.00
|
Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
BioArchLinuxBot
|
2023-12-14 00:13 (UTC) |
r-pepstat
|
1.38.0-1 |
0 |
0.00
|
Statistical analysis of peptide microarrays |
BioArchLinuxBot
|
2024-05-01 22:18 (UTC) |
r-pepsnmr
|
1.22.0-1 |
0 |
0.00
|
Pre-process 1H-NMR FID signals |
BioArchLinuxBot
|
2024-05-01 20:25 (UTC) |
r-pengls
|
1.10.0-1 |
0 |
0.00
|
Fit Penalised Generalised Least Squares models |
BioArchLinuxBot
|
2024-05-01 19:50 (UTC) |
r-penalized
|
0.9.52-1 |
0 |
0.00
|
L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model |
BioArchLinuxBot
|
2022-06-06 10:13 (UTC) |
r-pema
|
0.1.3-5 |
0 |
0.00
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Penalized Meta-Analysis |
BioArchLinuxBot
|
2024-02-08 13:47 (UTC) |
r-peco
|
1.16.0-1 |
0 |
0.00
|
A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data |
BioArchLinuxBot
|
2024-05-03 01:51 (UTC) |
r-peca
|
1.40.0-1 |
0 |
0.00
|
Probe-level Expression Change Averaging |
BioArchLinuxBot
|
2024-05-02 02:11 (UTC) |
r-peakpanther
|
1.18.0-1 |
0 |
0.00
|
Peak Picking and Annotation of High Resolution Experiments |
BioArchLinuxBot
|
2024-05-08 18:12 (UTC) |
r-peacoqc
|
1.14.0-1 |
0 |
0.00
|
Peak-based selection of high quality cytometry data |
BioArchLinuxBot
|
2024-05-02 13:20 (UTC) |
r-pdist
|
1.2.1-7 |
0 |
0.00
|
Partitioned Distance Function |
BioArchLinuxBot
|
2024-04-24 19:45 (UTC) |
r-pdinfobuilder
|
1.68.0-1 |
0 |
0.00
|
Platform Design Information Package Builder |
BioArchLinuxBot
|
2024-05-03 00:26 (UTC) |
r-pdftools
|
3.4.0-3 |
0 |
0.00
|
Text Extraction, Rendering and Converting of PDF Documents |
BioArchLinuxBot
|
2024-04-25 10:11 (UTC) |
r-pdfcluster
|
1.0.4-3 |
0 |
0.00
|
Cluster Analysis via Nonparametric Density Estimation |
pekkarr
|
2024-04-25 14:17 (UTC) |
r-pdatk
|
1.12.0-1 |
0 |
0.00
|
Pancreatic Ductal Adenocarcinoma Tool-Kit |
BioArchLinuxBot
|
2024-05-03 00:41 (UTC) |
r-pd.mapping50k.xba240
|
3.12.0-3 |
0 |
0.00
|
Platform Design Info for Affymetrix Mapping50K_Xba240 |
BioArchLinuxBot
|
2022-06-06 10:11 (UTC) |
r-pcxndata
|
2.25.0-1 |
0 |
0.00
|
Correlation coefficients and p values between pre-defined pathway/gene sets |
BioArchLinuxBot
|
2024-05-02 04:23 (UTC) |
r-pcxn
|
2.26.0-1 |
0 |
0.00
|
Exploring, analyzing and visualizing functions utilizing the pcxnData package |
BioArchLinuxBot
|
2024-05-01 19:04 (UTC) |
r-pcict
|
0.5.4.4-1 |
0 |
0.00
|
Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars |
pekkarr
|
2024-02-12 17:44 (UTC) |
r-pcatools
|
2.16.0-1 |
0 |
0.00
|
PCAtools: Everything Principal Components Analysis |
BioArchLinuxBot
|
2024-05-02 13:24 (UTC) |
r-pcapp
|
2.0.4-2 |
0 |
0.00
|
Robust PCA by Projection Pursuit |
BioArchLinuxBot
|
2024-04-07 18:02 (UTC) |