r-deformats
|
1.32.0-1 |
0 |
0.00
|
Differential gene expression data formats converter |
BioArchLinuxBot
|
2024-05-02 22:05 (UTC) |
r-deepsnv
|
1.50.0-1 |
0 |
0.00
|
Detection of subclonal SNVs in deep sequencing data. |
BioArchLinuxBot
|
2024-05-03 04:39 (UTC) |
r-deeppincs
|
1.12.0-1 |
0 |
0.00
|
Protein Interactions and Networks with Compounds based on Sequences using Deep Learning |
BioArchLinuxBot
|
2024-05-01 23:59 (UTC) |
r-deepbluer
|
1.26.0-1 |
0 |
0.00
|
DeepBlueR |
BioArchLinuxBot
|
2023-04-27 15:33 (UTC) |
r-decoupler
|
2.9.7-1 |
0 |
0.00
|
Ensemble of computational methods to infer biological activities from omics data |
BioArchLinuxBot
|
2024-05-03 18:05 (UTC) |
r-decor
|
1.0.2-2 |
0 |
0.00
|
Retrieve Code Decorations |
peippo
|
2023-10-16 07:14 (UTC) |
r-deconvr
|
1.10.0-1 |
0 |
0.00
|
Simulation and Deconvolution of Omic Profiles |
BioArchLinuxBot
|
2024-05-03 14:18 (UTC) |
r-decontx
|
1.2.0-1 |
0 |
0.00
|
Decontamination of single cell genomics data |
pekkarr
|
2024-05-03 03:58 (UTC) |
r-decontam
|
1.24.0-1 |
0 |
0.00
|
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data |
BioArchLinuxBot
|
2024-05-01 20:15 (UTC) |
r-deconstructsigs
|
1.8.0-3 |
0 |
0.00
|
Identifies Signatures Present in a Tumor Sample |
BioArchLinuxBot
|
2022-06-05 23:46 (UTC) |
r-deconrnaseq
|
1.46.0-1 |
0 |
0.00
|
Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data |
BioArchLinuxBot
|
2024-05-01 22:46 (UTC) |
r-decomptumor2sig
|
2.20.0-1 |
0 |
0.00
|
Decomposition of individual tumors into mutational signatures by signature refitting |
BioArchLinuxBot
|
2024-05-03 05:07 (UTC) |
r-decomplexdisease
|
1.18.0-4 |
0 |
0.00
|
A tool for differential expression analysis and DEGs based investigation to complex diseases by bi-clustering analysis |
BioArchLinuxBot
|
2023-04-29 06:34 (UTC) |
r-deco
|
1.13.0-3 |
0 |
0.00
|
Decomposing Heterogeneous Cohorts using Omic Data Profiling |
BioArchLinuxBot
|
2024-02-12 18:05 (UTC) |
r-decipher
|
3.0.0-1 |
0 |
0.00
|
Tools for curating, analyzing, and manipulating biological sequences |
BioArchLinuxBot
|
2024-05-02 00:05 (UTC) |
r-debugme
|
1.2.0-1 |
0 |
0.00
|
Specify debug messages as special string constants, and control debugging of packages via environment variables. |
peippo
|
2024-04-29 09:04 (UTC) |
r-debrowser
|
1.32.0-1 |
0 |
0.00
|
Interactive Differential Expresion Analysis Browser |
BioArchLinuxBot
|
2024-05-03 13:56 (UTC) |
r-debcam
|
1.22.0-1 |
0 |
0.00
|
Deconvolution by Convex Analysis of Mixtures |
BioArchLinuxBot
|
2024-05-02 20:29 (UTC) |
r-dearseq
|
1.16.0-1 |
0 |
0.00
|
Differential Expression Analysis for RNA-seq data through a robust variance component test |
BioArchLinuxBot
|
2024-05-01 20:37 (UTC) |
r-ddrtree
|
0.1.5-9 |
0 |
0.00
|
Learning Principal Graphs with DDRTree |
BioArchLinuxBot
|
2024-04-25 04:25 (UTC) |
r-ddpcrclust
|
1.24.0-1 |
0 |
0.00
|
Clustering algorithm for ddPCR data |
BioArchLinuxBot
|
2024-05-01 23:07 (UTC) |
r-ddpcr
|
1.15.2-1 |
0 |
0.00
|
Analysis and Visualization of Droplet Digital PCR in R and on the Web |
BioArchLinuxBot
|
2023-08-21 00:04 (UTC) |
r-ddct
|
1.60.0-1 |
0 |
0.00
|
The ddCt Algorithm for the Analysis of Quantitative Real-Time PCR (qRT-PCR) |
BioArchLinuxBot
|
2024-05-02 12:29 (UTC) |
r-ddalpha
|
1.3.15-2 |
0 |
0.00
|
Depth-Based Classification and Calculation of Data Depth |
pekkarr
|
2024-04-25 14:14 (UTC) |
r-dcgsa
|
1.32.0-1 |
0 |
0.00
|
Distance-correlation based Gene Set Analysis for longitudinal gene expression profiles |
BioArchLinuxBot
|
2024-05-01 19:46 (UTC) |
r-dce
|
1.12.0-1 |
0 |
0.00
|
Pathway Enrichment Based on Differential Causal Effects |
BioArchLinuxBot
|
2024-05-02 21:03 (UTC) |
r-dcats
|
1.2.0-1 |
0 |
0.00
|
Differential Composition Analysis Transformed by a Similarity matrix |
pekkarr
|
2024-05-02 04:49 (UTC) |
r-dcanr
|
1.20.0-1 |
0 |
0.00
|
Differential co-expression/association network analysis |
BioArchLinuxBot
|
2024-05-01 21:34 (UTC) |
r-dbscan
|
1.1.12-1 |
0 |
0.00
|
Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms |
BioArchLinuxBot
|
2023-11-28 18:20 (UTC) |
r-dbitest
|
1.8.1-1 |
0 |
0.00
|
Testing DBI Backends |
pekkarr
|
2024-03-31 18:01 (UTC) |
r-dbi
|
1.2.2-1 |
0 |
0.00
|
R Database Interface |
pekkarr
|
2024-03-17 13:11 (UTC) |
r-datawizard
|
0.10.0-2 |
0 |
0.00
|
Easy Data Wrangling and Statistical Transformations |
BioArchLinuxBot
|
2024-04-10 18:06 (UTC) |
r-datavisualizations
|
1.3.2-3 |
0 |
0.00
|
Visualizations of High-Dimensional Data |
BioArchLinuxBot
|
2023-10-27 04:06 (UTC) |
r-datamods
|
1.5.0-1 |
0 |
0.00
|
Modules to Import and Manipulate Data in 'Shiny' |
BioArchLinuxBot
|
2024-04-05 12:05 (UTC) |
r-data.tree
|
1.1.0-2 |
0 |
0.00
|
General Purpose Hierarchical Data Structure |
BioArchLinuxBot
|
2024-04-10 12:08 (UTC) |
r-dasper
|
1.9.0-3 |
0 |
0.00
|
Detecting abberant splicing events from RNA-sequencing data |
BioArchLinuxBot
|
2024-04-27 20:34 (UTC) |
r-dashboardthemes
|
1.1.6-3 |
0 |
0.00
|
Customise the Appearance of 'shinydashboard' Applications using Themes |
pekkarr
|
2024-04-25 10:36 (UTC) |
r-dart
|
1.52.0-1 |
0 |
0.00
|
Denoising Algorithm based on Relevance network Topology |
BioArchLinuxBot
|
2024-05-01 21:22 (UTC) |
r-dapardata
|
1.34.0-1 |
0 |
0.00
|
Data accompanying the DAPAR and Prostar packages |
BioArchLinuxBot
|
2024-05-04 01:16 (UTC) |
r-dapar
|
1.36.0-1 |
0 |
0.00
|
Tools for the Differential Analysis of Proteins Abundance with R |
BioArchLinuxBot
|
2024-05-04 18:31 (UTC) |
r-damirseq
|
2.16.0-1 |
0 |
0.00
|
Data Mining for RNA-seq data: normalization, feature selection and classification |
BioArchLinuxBot
|
2024-05-03 13:54 (UTC) |
r-damefinder
|
1.16.0-1 |
0 |
0.00
|
Finds DAMEs - Differential Allelicly MEthylated regions |
BioArchLinuxBot
|
2024-05-03 05:11 (UTC) |
r-dama
|
1.76.0-1 |
0 |
0.00
|
Efficient design and analysis of factorial two-colour microarray data |
BioArchLinuxBot
|
2024-05-02 04:22 (UTC) |
r-dalex
|
2.4.3-3 |
0 |
0.00
|
moDel Agnostic Language for Exploration and eXplanation |
pekkarr
|
2024-04-28 14:39 (UTC) |
r-daglogo
|
1.42.0-1 |
0 |
0.00
|
dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory |
BioArchLinuxBot
|
2024-05-03 19:07 (UTC) |
r-dagitty
|
0.3.4-3 |
0 |
0.00
|
Graphical Analysis of Structural Causal Models |
pekkarr
|
2024-04-25 08:37 (UTC) |
r-daewr
|
1.2.11-2 |
0 |
0.00
|
Design and Analysis of Experiments with R |
BioArchLinuxBot
|
2024-04-07 18:12 (UTC) |
r-dada2
|
1.30.0-1 |
0 |
0.00
|
Accurate, high-resolution sample inference from amplicon sequencing data |
greyltc
|
2023-11-02 09:37 (UTC) |
r-cytoviewer
|
1.4.0-1 |
0 |
0.00
|
An interactive multi-channel image viewer for R |
pekkarr
|
2024-05-03 09:31 (UTC) |
r-cytotree
|
1.6.0-4 |
0 |
0.00
|
A Toolkit for Flow And Mass Cytometry Data |
BioArchLinuxBot
|
2022-11-04 06:33 (UTC) |
r-cytopipelinegui
|
1.2.0-1 |
0 |
0.00
|
GUI's for visualization of flow cytometry data analysis pipelines |
pekkarr
|
2024-05-05 18:14 (UTC) |
r-cytopipeline
|
1.4.0-1 |
0 |
0.00
|
Automation and visualization of flow cytometry data analysis pipelines |
pekkarr
|
2024-05-04 12:20 (UTC) |
r-cytoml
|
2.16.0-1 |
0 |
0.00
|
A GatingML Interface for Cross Platform Cytometry Data Sharing |
BioArchLinuxBot
|
2024-05-02 13:23 (UTC) |
r-cytometree
|
2.0.2-4 |
0 |
0.00
|
Automated Cytometry Gating and Annotation |
BioArchLinuxBot
|
2022-06-05 23:33 (UTC) |
r-cytomem
|
1.8.0-1 |
0 |
0.00
|
Marker Enrichment Modeling (MEM) |
pekkarr
|
2024-05-02 13:01 (UTC) |
r-cytomapper
|
1.16.0-1 |
0 |
0.00
|
Visualization of highly multiplexed imaging data in R |
BioArchLinuxBot
|
2024-05-03 08:54 (UTC) |
r-cytolib
|
2.16.0-1 |
0 |
0.00
|
C++ infrastructure for representing and interacting with the gated cytometry data |
BioArchLinuxBot
|
2024-05-02 05:12 (UTC) |
r-cytokernel
|
1.10.0-1 |
0 |
0.00
|
Differential expression using kernel-based score test |
BioArchLinuxBot
|
2024-05-02 20:27 (UTC) |
r-cytoglmm
|
1.12.0-1 |
0 |
0.00
|
Conditional Differential Analysis for Flow and Mass Cytometry Experiments |
BioArchLinuxBot
|
2024-05-01 23:44 (UTC) |
r-cytofqc
|
1.4.0-1 |
0 |
0.00
|
Labels normalized cells for CyTOF data and assigns probabilities for each label |
pekkarr
|
2024-05-03 04:00 (UTC) |
r-cytofpower
|
1.10.0-1 |
0 |
0.00
|
Power analysis for CyTOF experiments |
BioArchLinuxBot
|
2024-05-02 23:01 (UTC) |
r-cytodx
|
1.24.0-1 |
0 |
0.00
|
Robust prediction of clinical outcomes using cytometry data without cell gating |
BioArchLinuxBot
|
2024-05-01 23:40 (UTC) |
r-cydar
|
1.28.0-1 |
0 |
0.00
|
Using Mass Cytometry for Differential Abundance Analyses |
BioArchLinuxBot
|
2024-05-02 21:37 (UTC) |
r-cyclocomp
|
1.1.1-1 |
0 |
0.00
|
Cyclomatic Complexity of R Code |
BioArchLinuxBot
|
2023-08-30 18:02 (UTC) |
r-cycle
|
1.58.0-1 |
0 |
0.00
|
Significance of periodic expression pattern in time-series data |
BioArchLinuxBot
|
2024-05-01 22:56 (UTC) |
r-cyanofilter
|
1.12.0-1 |
0 |
0.00
|
Phytoplankton Population Identification using Cell Pigmentation and/or Complexity |
BioArchLinuxBot
|
2024-05-01 23:12 (UTC) |
r-cvxr
|
1.0.12-1 |
0 |
0.00
|
Disciplined Convex Optimization |
BioArchLinuxBot
|
2024-02-02 06:15 (UTC) |
r-cvtools
|
0.3.3-1 |
0 |
0.00
|
Cross-validation tools for regression models |
BioArchLinuxBot
|
2024-03-13 18:10 (UTC) |
r-cvst
|
0.2.3-3 |
0 |
0.00
|
Fast Cross-Validation via Sequential Testing |
pekkarr
|
2024-04-25 00:28 (UTC) |
r-cvms
|
1.6.1-1 |
0 |
0.00
|
Cross-Validation for Model Selection |
BioArchLinuxBot
|
2024-02-28 00:06 (UTC) |
r-cvauc
|
1.1.4-3 |
0 |
0.00
|
Cross-Validated Area Under the ROC Curve Confidence Intervals |
BioArchLinuxBot
|
2022-06-06 16:23 (UTC) |
r-cvar
|
0.5-1 |
0 |
0.00
|
Compute Expected Shortfall and Value at Risk for Continuous Distributions |
BioArchLinuxBot
|
2022-11-13 02:53 (UTC) |
r-customprodb
|
1.42.1-1 |
0 |
0.00
|
Generate customized protein database from NGS data, with a focus on RNA-Seq data, for proteomics search |
BioArchLinuxBot
|
2024-03-07 06:07 (UTC) |
r-customcmpdb
|
1.14.0-1 |
0 |
0.00
|
Customize and Query Compound Annotation Database |
BioArchLinuxBot
|
2024-05-02 02:15 (UTC) |
r-curry
|
0.1.1-9 |
0 |
0.00
|
Partial Function Application with %<%, %-<%, and %><% |
BioArchLinuxBot
|
2024-03-27 18:04 (UTC) |
r-curl
|
5.2.1-1 |
1 |
0.00
|
A Modern and Flexible Web Client for R |
pekkarr
|
2024-03-17 13:11 (UTC) |
r-curatedtcgadata
|
1.26.0-1 |
0 |
0.00
|
Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects |
BioArchLinuxBot
|
2024-05-03 08:27 (UTC) |
r-cummerbund
|
2.46.0-1 |
0 |
0.00
|
Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data. |
BioArchLinuxBot
|
2024-05-03 06:07 (UTC) |
r-cubist
|
0.4.2.1-1 |
0 |
0.00
|
Rule- And Instance-Based Regression Modeling |
BioArchLinuxBot
|
2023-03-09 12:01 (UTC) |
r-cubble
|
0.3.0-3 |
0 |
0.00
|
A Vector Spatio-Temporal Data Structure for Data Analysis |
pekkarr
|
2024-04-26 00:56 (UTC) |
r-cubature
|
2.1.0-2 |
0 |
0.00
|
Adaptive Multivariate Integration over Hypercubes |
BioArchLinuxBot
|
2024-04-25 07:21 (UTC) |
r-ctsv
|
1.6.0-1 |
0 |
0.00
|
Identification of cell-type-specific spatially variable genes accounting for excess zeros |
pekkarr
|
2024-05-03 09:05 (UTC) |
r-ctsge
|
1.30.0-1 |
0 |
0.00
|
Clustering of Time Series Gene Expression data |
BioArchLinuxBot
|
2024-05-01 20:34 (UTC) |
r-ctrap
|
1.22.0-1 |
0 |
0.00
|
Identification of candidate causal perturbations from differential gene expression data |
BioArchLinuxBot
|
2024-05-02 02:18 (UTC) |
r-ctggem
|
1.7.0-4 |
0 |
0.00
|
Generating Tree Hierarchy Visualizations from Gene Expression Data |
BioArchLinuxBot
|
2022-11-04 06:20 (UTC) |
r-ctdquerier
|
2.12.0-1 |
0 |
0.00
|
Package for CTDbase data query, visualization and downstream analysis |
BioArchLinuxBot
|
2024-05-01 23:18 (UTC) |
r-ctdata
|
1.4.0-1 |
0 |
0.00
|
Data companion to CTexploreR |
pekkarr
|
2024-05-02 20:40 (UTC) |
r-ctc
|
1.78.0-1 |
0 |
0.00
|
Cluster and Tree Conversion |
BioArchLinuxBot
|
2024-05-02 04:43 (UTC) |
r-cssq
|
1.16.0-1 |
0 |
0.00
|
Chip-seq Signal Quantifier Pipeline |
BioArchLinuxBot
|
2024-05-03 02:31 (UTC) |
r-cssp
|
1.37.0-2 |
0 |
0.00
|
ChIP-Seq Statistical Power |
BioArchLinuxBot
|
2024-02-11 12:01 (UTC) |
r-csem
|
0.5.0-1 |
0 |
0.00
|
Composite-Based Structural Equation Modeling |
BioArchLinuxBot
|
2023-01-27 06:00 (UTC) |
r-csdr
|
1.10.0-1 |
0 |
0.00
|
Differential gene co-expression |
BioArchLinuxBot
|
2024-05-02 20:54 (UTC) |
r-csaw
|
1.38.0-1 |
0 |
0.00
|
ChIP-Seq Analysis with Windows |
BioArchLinuxBot
|
2024-05-02 21:14 (UTC) |
r-csar
|
1.56.0-1 |
0 |
0.00
|
Statistical tools for the analysis of ChIP-seq data |
BioArchLinuxBot
|
2024-05-01 22:11 (UTC) |
r-crul
|
1.4.2-1 |
0 |
0.00
|
HTTP Client |
BioArchLinuxBot
|
2024-04-09 18:02 (UTC) |
r-crosstalk
|
1.2.1-1 |
1 |
0.00
|
Inter-Widget Interactivity for HTML Widgets |
BioArchLinuxBot
|
2023-11-23 12:08 (UTC) |
r-crossmeta
|
1.30.0-1 |
0 |
0.00
|
Cross Platform Meta-Analysis of Microarray Data |
BioArchLinuxBot
|
2024-05-03 13:50 (UTC) |
r-crmn
|
0.0.21-4 |
0 |
0.00
|
CCMN and Other Normalization Methods for Metabolomics Data |
BioArchLinuxBot
|
2022-06-05 23:22 (UTC) |
r-crlmm
|
1.62.0-1 |
0 |
0.00
|
Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays |
BioArchLinuxBot
|
2024-05-02 22:43 (UTC) |
r-crisprvariants
|
1.32.0-1 |
0 |
0.00
|
Tools for counting and visualising mutations in a target location |
BioArchLinuxBot
|
2024-05-02 23:43 (UTC) |