91608 packages found. Page 428 of 917.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-deformats 1.32.0-1 0 0.00 Differential gene expression data formats converter BioArchLinuxBot 2024-05-02 22:05 (UTC)
r-deepsnv 1.50.0-1 0 0.00 Detection of subclonal SNVs in deep sequencing data. BioArchLinuxBot 2024-05-03 04:39 (UTC)
r-deeppincs 1.12.0-1 0 0.00 Protein Interactions and Networks with Compounds based on Sequences using Deep Learning BioArchLinuxBot 2024-05-01 23:59 (UTC)
r-deepbluer 1.26.0-1 0 0.00 DeepBlueR BioArchLinuxBot 2023-04-27 15:33 (UTC)
r-decoupler 2.9.7-1 0 0.00 Ensemble of computational methods to infer biological activities from omics data BioArchLinuxBot 2024-05-03 18:05 (UTC)
r-decor 1.0.2-2 0 0.00 Retrieve Code Decorations peippo 2023-10-16 07:14 (UTC)
r-deconvr 1.10.0-1 0 0.00 Simulation and Deconvolution of Omic Profiles BioArchLinuxBot 2024-05-03 14:18 (UTC)
r-decontx 1.2.0-1 0 0.00 Decontamination of single cell genomics data pekkarr 2024-05-03 03:58 (UTC)
r-decontam 1.24.0-1 0 0.00 Identify Contaminants in Marker-gene and Metagenomics Sequencing Data BioArchLinuxBot 2024-05-01 20:15 (UTC)
r-deconstructsigs 1.8.0-3 0 0.00 Identifies Signatures Present in a Tumor Sample BioArchLinuxBot 2022-06-05 23:46 (UTC)
r-deconrnaseq 1.46.0-1 0 0.00 Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data BioArchLinuxBot 2024-05-01 22:46 (UTC)
r-decomptumor2sig 2.20.0-1 0 0.00 Decomposition of individual tumors into mutational signatures by signature refitting BioArchLinuxBot 2024-05-03 05:07 (UTC)
r-decomplexdisease 1.18.0-4 0 0.00 A tool for differential expression analysis and DEGs based investigation to complex diseases by bi-clustering analysis BioArchLinuxBot 2023-04-29 06:34 (UTC)
r-deco 1.13.0-3 0 0.00 Decomposing Heterogeneous Cohorts using Omic Data Profiling BioArchLinuxBot 2024-02-12 18:05 (UTC)
r-decipher 3.0.0-1 0 0.00 Tools for curating, analyzing, and manipulating biological sequences BioArchLinuxBot 2024-05-02 00:05 (UTC)
r-debugme 1.2.0-1 0 0.00 Specify debug messages as special string constants, and control debugging of packages via environment variables. peippo 2024-04-29 09:04 (UTC)
r-debrowser 1.32.0-1 0 0.00 Interactive Differential Expresion Analysis Browser BioArchLinuxBot 2024-05-03 13:56 (UTC)
r-debcam 1.22.0-1 0 0.00 Deconvolution by Convex Analysis of Mixtures BioArchLinuxBot 2024-05-02 20:29 (UTC)
r-dearseq 1.16.0-1 0 0.00 Differential Expression Analysis for RNA-seq data through a robust variance component test BioArchLinuxBot 2024-05-01 20:37 (UTC)
r-ddrtree 0.1.5-9 0 0.00 Learning Principal Graphs with DDRTree BioArchLinuxBot 2024-04-25 04:25 (UTC)
r-ddpcrclust 1.24.0-1 0 0.00 Clustering algorithm for ddPCR data BioArchLinuxBot 2024-05-01 23:07 (UTC)
r-ddpcr 1.15.2-1 0 0.00 Analysis and Visualization of Droplet Digital PCR in R and on the Web BioArchLinuxBot 2023-08-21 00:04 (UTC)
r-ddct 1.60.0-1 0 0.00 The ddCt Algorithm for the Analysis of Quantitative Real-Time PCR (qRT-PCR) BioArchLinuxBot 2024-05-02 12:29 (UTC)
r-ddalpha 1.3.15-2 0 0.00 Depth-Based Classification and Calculation of Data Depth pekkarr 2024-04-25 14:14 (UTC)
r-dcgsa 1.32.0-1 0 0.00 Distance-correlation based Gene Set Analysis for longitudinal gene expression profiles BioArchLinuxBot 2024-05-01 19:46 (UTC)
r-dce 1.12.0-1 0 0.00 Pathway Enrichment Based on Differential Causal Effects BioArchLinuxBot 2024-05-02 21:03 (UTC)
r-dcats 1.2.0-1 0 0.00 Differential Composition Analysis Transformed by a Similarity matrix pekkarr 2024-05-02 04:49 (UTC)
r-dcanr 1.20.0-1 0 0.00 Differential co-expression/association network analysis BioArchLinuxBot 2024-05-01 21:34 (UTC)
r-dbscan 1.1.12-1 0 0.00 Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms BioArchLinuxBot 2023-11-28 18:20 (UTC)
r-dbitest 1.8.1-1 0 0.00 Testing DBI Backends pekkarr 2024-03-31 18:01 (UTC)
r-dbi 1.2.2-1 0 0.00 R Database Interface pekkarr 2024-03-17 13:11 (UTC)
r-datawizard 0.10.0-2 0 0.00 Easy Data Wrangling and Statistical Transformations BioArchLinuxBot 2024-04-10 18:06 (UTC)
r-datavisualizations 1.3.2-3 0 0.00 Visualizations of High-Dimensional Data BioArchLinuxBot 2023-10-27 04:06 (UTC)
r-datamods 1.5.0-1 0 0.00 Modules to Import and Manipulate Data in 'Shiny' BioArchLinuxBot 2024-04-05 12:05 (UTC)
r-data.tree 1.1.0-2 0 0.00 General Purpose Hierarchical Data Structure BioArchLinuxBot 2024-04-10 12:08 (UTC)
r-dasper 1.9.0-3 0 0.00 Detecting abberant splicing events from RNA-sequencing data BioArchLinuxBot 2024-04-27 20:34 (UTC)
r-dashboardthemes 1.1.6-3 0 0.00 Customise the Appearance of 'shinydashboard' Applications using Themes pekkarr 2024-04-25 10:36 (UTC)
r-dart 1.52.0-1 0 0.00 Denoising Algorithm based on Relevance network Topology BioArchLinuxBot 2024-05-01 21:22 (UTC)
r-dapardata 1.34.0-1 0 0.00 Data accompanying the DAPAR and Prostar packages BioArchLinuxBot 2024-05-04 01:16 (UTC)
r-dapar 1.36.0-1 0 0.00 Tools for the Differential Analysis of Proteins Abundance with R BioArchLinuxBot 2024-05-04 18:31 (UTC)
r-damirseq 2.16.0-1 0 0.00 Data Mining for RNA-seq data: normalization, feature selection and classification BioArchLinuxBot 2024-05-03 13:54 (UTC)
r-damefinder 1.16.0-1 0 0.00 Finds DAMEs - Differential Allelicly MEthylated regions BioArchLinuxBot 2024-05-03 05:11 (UTC)
r-dama 1.76.0-1 0 0.00 Efficient design and analysis of factorial two-colour microarray data BioArchLinuxBot 2024-05-02 04:22 (UTC)
r-dalex 2.4.3-3 0 0.00 moDel Agnostic Language for Exploration and eXplanation pekkarr 2024-04-28 14:39 (UTC)
r-daglogo 1.42.0-1 0 0.00 dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory BioArchLinuxBot 2024-05-03 19:07 (UTC)
r-dagitty 0.3.4-3 0 0.00 Graphical Analysis of Structural Causal Models pekkarr 2024-04-25 08:37 (UTC)
r-daewr 1.2.11-2 0 0.00 Design and Analysis of Experiments with R BioArchLinuxBot 2024-04-07 18:12 (UTC)
r-dada2 1.30.0-1 0 0.00 Accurate, high-resolution sample inference from amplicon sequencing data greyltc 2023-11-02 09:37 (UTC)
r-cytoviewer 1.4.0-1 0 0.00 An interactive multi-channel image viewer for R pekkarr 2024-05-03 09:31 (UTC)
r-cytotree 1.6.0-4 0 0.00 A Toolkit for Flow And Mass Cytometry Data BioArchLinuxBot 2022-11-04 06:33 (UTC)
r-cytopipelinegui 1.2.0-1 0 0.00 GUI's for visualization of flow cytometry data analysis pipelines pekkarr 2024-05-05 18:14 (UTC)
r-cytopipeline 1.4.0-1 0 0.00 Automation and visualization of flow cytometry data analysis pipelines pekkarr 2024-05-04 12:20 (UTC)
r-cytoml 2.16.0-1 0 0.00 A GatingML Interface for Cross Platform Cytometry Data Sharing BioArchLinuxBot 2024-05-02 13:23 (UTC)
r-cytometree 2.0.2-4 0 0.00 Automated Cytometry Gating and Annotation BioArchLinuxBot 2022-06-05 23:33 (UTC)
r-cytomem 1.8.0-1 0 0.00 Marker Enrichment Modeling (MEM) pekkarr 2024-05-02 13:01 (UTC)
r-cytomapper 1.16.0-1 0 0.00 Visualization of highly multiplexed imaging data in R BioArchLinuxBot 2024-05-03 08:54 (UTC)
r-cytolib 2.16.0-1 0 0.00 C++ infrastructure for representing and interacting with the gated cytometry data BioArchLinuxBot 2024-05-02 05:12 (UTC)
r-cytokernel 1.10.0-1 0 0.00 Differential expression using kernel-based score test BioArchLinuxBot 2024-05-02 20:27 (UTC)
r-cytoglmm 1.12.0-1 0 0.00 Conditional Differential Analysis for Flow and Mass Cytometry Experiments BioArchLinuxBot 2024-05-01 23:44 (UTC)
r-cytofqc 1.4.0-1 0 0.00 Labels normalized cells for CyTOF data and assigns probabilities for each label pekkarr 2024-05-03 04:00 (UTC)
r-cytofpower 1.10.0-1 0 0.00 Power analysis for CyTOF experiments BioArchLinuxBot 2024-05-02 23:01 (UTC)
r-cytodx 1.24.0-1 0 0.00 Robust prediction of clinical outcomes using cytometry data without cell gating BioArchLinuxBot 2024-05-01 23:40 (UTC)
r-cydar 1.28.0-1 0 0.00 Using Mass Cytometry for Differential Abundance Analyses BioArchLinuxBot 2024-05-02 21:37 (UTC)
r-cyclocomp 1.1.1-1 0 0.00 Cyclomatic Complexity of R Code BioArchLinuxBot 2023-08-30 18:02 (UTC)
r-cycle 1.58.0-1 0 0.00 Significance of periodic expression pattern in time-series data BioArchLinuxBot 2024-05-01 22:56 (UTC)
r-cyanofilter 1.12.0-1 0 0.00 Phytoplankton Population Identification using Cell Pigmentation and/or Complexity BioArchLinuxBot 2024-05-01 23:12 (UTC)
r-cvxr 1.0.12-1 0 0.00 Disciplined Convex Optimization BioArchLinuxBot 2024-02-02 06:15 (UTC)
r-cvtools 0.3.3-1 0 0.00 Cross-validation tools for regression models BioArchLinuxBot 2024-03-13 18:10 (UTC)
r-cvst 0.2.3-3 0 0.00 Fast Cross-Validation via Sequential Testing pekkarr 2024-04-25 00:28 (UTC)
r-cvms 1.6.1-1 0 0.00 Cross-Validation for Model Selection BioArchLinuxBot 2024-02-28 00:06 (UTC)
r-cvauc 1.1.4-3 0 0.00 Cross-Validated Area Under the ROC Curve Confidence Intervals BioArchLinuxBot 2022-06-06 16:23 (UTC)
r-cvar 0.5-1 0 0.00 Compute Expected Shortfall and Value at Risk for Continuous Distributions BioArchLinuxBot 2022-11-13 02:53 (UTC)
r-customprodb 1.42.1-1 0 0.00 Generate customized protein database from NGS data, with a focus on RNA-Seq data, for proteomics search BioArchLinuxBot 2024-03-07 06:07 (UTC)
r-customcmpdb 1.14.0-1 0 0.00 Customize and Query Compound Annotation Database BioArchLinuxBot 2024-05-02 02:15 (UTC)
r-curry 0.1.1-9 0 0.00 Partial Function Application with %<%, %-<%, and %><% BioArchLinuxBot 2024-03-27 18:04 (UTC)
r-curl 5.2.1-1 1 0.00 A Modern and Flexible Web Client for R pekkarr 2024-03-17 13:11 (UTC)
r-curatedtcgadata 1.26.0-1 0 0.00 Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects BioArchLinuxBot 2024-05-03 08:27 (UTC)
r-cummerbund 2.46.0-1 0 0.00 Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data. BioArchLinuxBot 2024-05-03 06:07 (UTC)
r-cubist 0.4.2.1-1 0 0.00 Rule- And Instance-Based Regression Modeling BioArchLinuxBot 2023-03-09 12:01 (UTC)
r-cubble 0.3.0-3 0 0.00 A Vector Spatio-Temporal Data Structure for Data Analysis pekkarr 2024-04-26 00:56 (UTC)
r-cubature 2.1.0-2 0 0.00 Adaptive Multivariate Integration over Hypercubes BioArchLinuxBot 2024-04-25 07:21 (UTC)
r-ctsv 1.6.0-1 0 0.00 Identification of cell-type-specific spatially variable genes accounting for excess zeros pekkarr 2024-05-03 09:05 (UTC)
r-ctsge 1.30.0-1 0 0.00 Clustering of Time Series Gene Expression data BioArchLinuxBot 2024-05-01 20:34 (UTC)
r-ctrap 1.22.0-1 0 0.00 Identification of candidate causal perturbations from differential gene expression data BioArchLinuxBot 2024-05-02 02:18 (UTC)
r-ctggem 1.7.0-4 0 0.00 Generating Tree Hierarchy Visualizations from Gene Expression Data BioArchLinuxBot 2022-11-04 06:20 (UTC)
r-ctdquerier 2.12.0-1 0 0.00 Package for CTDbase data query, visualization and downstream analysis BioArchLinuxBot 2024-05-01 23:18 (UTC)
r-ctdata 1.4.0-1 0 0.00 Data companion to CTexploreR pekkarr 2024-05-02 20:40 (UTC)
r-ctc 1.78.0-1 0 0.00 Cluster and Tree Conversion BioArchLinuxBot 2024-05-02 04:43 (UTC)
r-cssq 1.16.0-1 0 0.00 Chip-seq Signal Quantifier Pipeline BioArchLinuxBot 2024-05-03 02:31 (UTC)
r-cssp 1.37.0-2 0 0.00 ChIP-Seq Statistical Power BioArchLinuxBot 2024-02-11 12:01 (UTC)
r-csem 0.5.0-1 0 0.00 Composite-Based Structural Equation Modeling BioArchLinuxBot 2023-01-27 06:00 (UTC)
r-csdr 1.10.0-1 0 0.00 Differential gene co-expression BioArchLinuxBot 2024-05-02 20:54 (UTC)
r-csaw 1.38.0-1 0 0.00 ChIP-Seq Analysis with Windows BioArchLinuxBot 2024-05-02 21:14 (UTC)
r-csar 1.56.0-1 0 0.00 Statistical tools for the analysis of ChIP-seq data BioArchLinuxBot 2024-05-01 22:11 (UTC)
r-crul 1.4.2-1 0 0.00 HTTP Client BioArchLinuxBot 2024-04-09 18:02 (UTC)
r-crosstalk 1.2.1-1 1 0.00 Inter-Widget Interactivity for HTML Widgets BioArchLinuxBot 2023-11-23 12:08 (UTC)
r-crossmeta 1.30.0-1 0 0.00 Cross Platform Meta-Analysis of Microarray Data BioArchLinuxBot 2024-05-03 13:50 (UTC)
r-crmn 0.0.21-4 0 0.00 CCMN and Other Normalization Methods for Metabolomics Data BioArchLinuxBot 2022-06-05 23:22 (UTC)
r-crlmm 1.62.0-1 0 0.00 Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays BioArchLinuxBot 2024-05-02 22:43 (UTC)
r-crisprvariants 1.32.0-1 0 0.00 Tools for counting and visualising mutations in a target location BioArchLinuxBot 2024-05-02 23:43 (UTC)

91608 packages found. Page 428 of 917.

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