r-pkgdepends
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0.7.1-1 |
0 |
0.00
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Cache ‘CRAN’-Like Metadata and R Packages |
peippo
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2023-12-11 12:39 (UTC) |
r-pkgcache
|
2.2.2-1 |
0 |
0.00
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Cache ‘CRAN’-Like Metadata and R Packages |
peippo
|
2024-04-09 12:10 (UTC) |
r-pkgbuild
|
1.4.4-1 |
2 |
0.00
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Find Tools Needed to Build R Packages |
greyltc
|
2024-03-18 08:25 (UTC) |
r-pixmap
|
0.4.13-1 |
0 |
0.00
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Bitmap Images / Pixel Maps |
BioArchLinuxBot
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2024-05-03 18:20 (UTC) |
r-pipeframe
|
1.20.0-1 |
0 |
0.00
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Pipeline framework for bioinformatics in R |
BioArchLinuxBot
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2024-05-03 03:09 (UTC) |
r-pipecomp
|
1.14.0-1 |
0 |
0.00
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pipeComp pipeline benchmarking framework |
BioArchLinuxBot
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2024-05-03 01:46 (UTC) |
r-pingr
|
2.0.3-2 |
0 |
0.00
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Check if a Remote Computer is Up |
pekkarr
|
2024-04-25 07:43 (UTC) |
r-ping
|
2.48.0-1 |
0 |
0.00
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Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data |
BioArchLinuxBot
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2024-05-03 06:04 (UTC) |
r-pinfsc50
|
1.3.0-2 |
0 |
0.00
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Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
BioArchLinuxBot
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2024-03-16 18:08 (UTC) |
r-pigengene
|
1.30.0-1 |
0 |
0.00
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Infers biological signatures from gene expression data |
BioArchLinuxBot
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2024-05-03 04:14 (UTC) |
r-pics
|
2.48.0-1 |
0 |
0.00
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Probabilistic inference of ChIP-seq |
BioArchLinuxBot
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2024-05-02 23:38 (UTC) |
r-pickgene
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1.76.0-1 |
0 |
0.00
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Adaptive Gene Picking for Microarray Expression Data Analysis |
BioArchLinuxBot
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2024-05-02 04:10 (UTC) |
r-picante
|
1.8.2-4 |
0 |
0.00
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Integrating Phylogenies and Ecology |
BioArchLinuxBot
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2022-06-06 10:30 (UTC) |
r-piano
|
2.20.0-1 |
0 |
0.00
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Platform for integrative analysis of omics data |
BioArchLinuxBot
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2024-05-02 02:19 (UTC) |
r-pi
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2.14.0-2 |
0 |
0.00
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Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level |
BioArchLinuxBot
|
2024-04-15 18:30 (UTC) |
r-phytools
|
2.1.1-2 |
0 |
0.00
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Phylogenetic Tools for Comparative Biology (and Other Things) |
pekkarr
|
2024-04-25 14:29 (UTC) |
r-phyloseq
|
1.48.0-1 |
0 |
0.00
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Handling and analysis of high-throughput microbiome census data |
BioArchLinuxBot
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2024-05-02 00:01 (UTC) |
r-phyloprofile
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1.16.5-1 |
0 |
0.00
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PhyloProfile |
BioArchLinuxBot
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2024-04-18 00:05 (UTC) |
r-phylolm
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2.6.2-1 |
0 |
0.00
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Phylogenetic Linear Regression |
BioArchLinuxBot
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2022-06-06 10:28 (UTC) |
r-phylogram
|
2.1.0-4 |
0 |
0.00
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Dendrograms for Evolutionary Analysis |
BioArchLinuxBot
|
2022-06-06 10:27 (UTC) |
r-phylobase
|
0.8.12-1 |
0 |
0.00
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Base Package for Phylogenetic Structures and Comparative Data |
BioArchLinuxBot
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2024-01-30 06:23 (UTC) |
r-phyclust
|
0.1.34-1 |
0 |
0.00
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Phylogenetic Clustering (Phyloclustering) |
BioArchLinuxBot
|
2023-09-06 06:07 (UTC) |
r-phosr
|
1.14.0-1 |
0 |
0.00
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A set of methods and tools for comprehensive analysis of phosphoproteomics data |
BioArchLinuxBot
|
2024-05-02 19:08 (UTC) |
r-phosphoricons
|
0.2.1-1 |
0 |
0.00
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'Phosphor' Icons for R |
BioArchLinuxBot
|
2024-04-08 12:01 (UTC) |
r-phosphonormalizer
|
1.28.0-1 |
0 |
0.00
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Compensates for the bias introduced by median normalization in |
BioArchLinuxBot
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2024-05-01 19:10 (UTC) |
r-phipdata
|
1.12.0-1 |
0 |
0.00
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Container for PhIP-Seq Experiments |
BioArchLinuxBot
|
2024-05-02 20:10 (UTC) |
r-philr
|
1.30.0-1 |
0 |
0.00
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Phylogenetic partitioning based ILR transform for metagenomics data |
BioArchLinuxBot
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2024-05-02 01:08 (UTC) |
r-philentropy
|
0.8.0-1 |
0 |
0.00
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Similarity and Distance Quantification Between Probability Functions |
BioArchLinuxBot
|
2023-12-02 18:03 (UTC) |
r-phenstat
|
2.40.0-1 |
0 |
0.00
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Statistical analysis of phenotypic data |
BioArchLinuxBot
|
2024-05-01 20:40 (UTC) |
r-phenotest
|
1.52.0-1 |
0 |
0.00
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Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2024-05-03 13:09 (UTC) |
r-phenopath
|
1.28.0-1 |
0 |
0.00
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Genomic trajectories with heterogeneous genetic and environmental backgrounds |
BioArchLinuxBot
|
2024-05-02 19:44 (UTC) |
r-phenomis
|
1.6.0-1 |
0 |
0.00
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Postprocessing and univariate analysis of omics data |
pekkarr
|
2024-05-03 00:35 (UTC) |
r-phenogeneranker
|
1.12.0-1 |
0 |
0.00
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PhenoGeneRanker: A gene and phenotype prioritization tool |
BioArchLinuxBot
|
2024-05-01 23:41 (UTC) |
r-phemd
|
1.18.0-2 |
0 |
0.00
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Phenotypic EMD for comparison of single-cell samples |
BioArchLinuxBot
|
2024-04-28 18:00 (UTC) |
r-pheatmap
|
1.0.12-4 |
0 |
0.00
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Pretty Heatmaps |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phater
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1.0.7-3 |
0 |
0.00
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PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phastcons100way.ucsc.hg38
|
3.7.1-3 |
0 |
0.00
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UCSC phastCons conservation scores for hg38 |
BioArchLinuxBot
|
2022-06-06 10:21 (UTC) |
r-phastcons100way.ucsc.hg19
|
3.7.2-3 |
0 |
0.00
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UCSC phastCons conservation scores for hg19 |
BioArchLinuxBot
|
2022-06-06 10:20 (UTC) |
r-pharmacogx
|
3.8.0-1 |
0 |
0.00
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Analysis of Large-Scale Pharmacogenomic Data |
BioArchLinuxBot
|
2024-05-03 00:40 (UTC) |
r-phantasuslite
|
1.2.0-1 |
0 |
0.00
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Loading and annotation RNA-seq counts matrices |
pekkarr
|
2024-05-08 18:03 (UTC) |
r-phantasus
|
1.24.0-1 |
0 |
0.00
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Visual and interactive gene expression analysis |
BioArchLinuxBot
|
2024-05-08 18:13 (UTC) |
r-phangorn
|
2.11.1-3 |
0 |
0.00
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Phylogenetic Reconstruction and Analysis |
BioArchLinuxBot
|
2023-02-09 18:07 (UTC) |
r-pgca
|
1.28.0-1 |
0 |
0.00
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An Algorithm to Link Protein Groups Created from MS/MS Data |
BioArchLinuxBot
|
2024-05-02 04:07 (UTC) |
r-pfp
|
1.7.0-2 |
0 |
0.00
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Pathway Fingerprint Framework in R |
BioArchLinuxBot
|
2024-02-13 18:06 (UTC) |
r-pfamanalyzer
|
1.4.0-1 |
0 |
0.00
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Identification of domain isotypes in pfam data |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-pfam.db
|
3.19.1-1 |
0 |
0.00
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A set of protein ID mappings for PFAM |
BioArchLinuxBot
|
2024-05-03 18:09 (UTC) |
r-permute
|
0.9.7-13 |
0 |
0.00
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Functions for Generating Restricted Permutations of Data |
BioArchLinuxBot
|
2024-04-24 19:21 (UTC) |
r-periodicdna
|
1.14.0-1 |
0 |
0.00
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Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2024-05-03 03:08 (UTC) |
r-performanceanalytics
|
2.0.4-4 |
0 |
0.00
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Econometric Tools for Performance and Risk Analysis |
BioArchLinuxBot
|
2022-06-06 10:16 (UTC) |
r-performance
|
0.11.0-1 |
0 |
0.00
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Assessment of Regression Models Performance |
BioArchLinuxBot
|
2024-03-23 12:13 (UTC) |
r-perfect
|
1.16.0-1 |
0 |
0.00
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Permutation filtration for microbiome data |
BioArchLinuxBot
|
2024-04-13 18:10 (UTC) |
r-pepxmltab
|
1.38.0-1 |
0 |
0.00
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Parsing pepXML files and filter based on peptide FDR |
BioArchLinuxBot
|
2024-05-02 04:34 (UTC) |
r-peptides
|
2.4.6-1 |
0 |
0.00
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Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
BioArchLinuxBot
|
2023-12-14 00:13 (UTC) |
r-pepstat
|
1.38.0-1 |
0 |
0.00
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Statistical analysis of peptide microarrays |
BioArchLinuxBot
|
2024-05-01 22:18 (UTC) |
r-pepsnmr
|
1.22.0-1 |
0 |
0.00
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Pre-process 1H-NMR FID signals |
BioArchLinuxBot
|
2024-05-01 20:25 (UTC) |
r-pengls
|
1.10.0-1 |
0 |
0.00
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Fit Penalised Generalised Least Squares models |
BioArchLinuxBot
|
2024-05-01 19:50 (UTC) |
r-penalized
|
0.9.52-1 |
0 |
0.00
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L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model |
BioArchLinuxBot
|
2022-06-06 10:13 (UTC) |
r-pema
|
0.1.3-5 |
0 |
0.00
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Penalized Meta-Analysis |
BioArchLinuxBot
|
2024-02-08 13:47 (UTC) |
r-peco
|
1.16.0-1 |
0 |
0.00
|
A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data |
BioArchLinuxBot
|
2024-05-03 01:51 (UTC) |
r-peca
|
1.40.0-1 |
0 |
0.00
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Probe-level Expression Change Averaging |
BioArchLinuxBot
|
2024-05-02 02:11 (UTC) |
r-peakpanther
|
1.18.0-1 |
0 |
0.00
|
Peak Picking and Annotation of High Resolution Experiments |
BioArchLinuxBot
|
2024-05-08 18:12 (UTC) |
r-peacoqc
|
1.14.0-1 |
0 |
0.00
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Peak-based selection of high quality cytometry data |
BioArchLinuxBot
|
2024-05-02 13:20 (UTC) |
r-pdist
|
1.2.1-7 |
0 |
0.00
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Partitioned Distance Function |
BioArchLinuxBot
|
2024-04-24 19:45 (UTC) |
r-pdinfobuilder
|
1.68.0-1 |
0 |
0.00
|
Platform Design Information Package Builder |
BioArchLinuxBot
|
2024-05-03 00:26 (UTC) |
r-pdftools
|
3.4.0-3 |
0 |
0.00
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Text Extraction, Rendering and Converting of PDF Documents |
BioArchLinuxBot
|
2024-04-25 10:11 (UTC) |
r-pdfcluster
|
1.0.4-3 |
0 |
0.00
|
Cluster Analysis via Nonparametric Density Estimation |
pekkarr
|
2024-04-25 14:17 (UTC) |
r-pdatk
|
1.12.0-1 |
0 |
0.00
|
Pancreatic Ductal Adenocarcinoma Tool-Kit |
BioArchLinuxBot
|
2024-05-03 00:41 (UTC) |
r-pd.mapping50k.xba240
|
3.12.0-3 |
0 |
0.00
|
Platform Design Info for Affymetrix Mapping50K_Xba240 |
BioArchLinuxBot
|
2022-06-06 10:11 (UTC) |
r-pcxndata
|
2.25.0-1 |
0 |
0.00
|
Correlation coefficients and p values between pre-defined pathway/gene sets |
BioArchLinuxBot
|
2024-05-02 04:23 (UTC) |
r-pcxn
|
2.26.0-1 |
0 |
0.00
|
Exploring, analyzing and visualizing functions utilizing the pcxnData package |
BioArchLinuxBot
|
2024-05-01 19:04 (UTC) |
r-pcict
|
0.5.4.4-1 |
0 |
0.00
|
Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars |
pekkarr
|
2024-02-12 17:44 (UTC) |
r-pcatools
|
2.16.0-1 |
0 |
0.00
|
PCAtools: Everything Principal Components Analysis |
BioArchLinuxBot
|
2024-05-02 13:24 (UTC) |
r-pcapp
|
2.0.4-2 |
0 |
0.00
|
Robust PCA by Projection Pursuit |
BioArchLinuxBot
|
2024-04-07 18:02 (UTC) |
r-pcan
|
1.32.0-1 |
0 |
0.00
|
Phenotype Consensus ANalysis (PCAN) |
BioArchLinuxBot
|
2024-05-01 19:48 (UTC) |
r-pcamethods
|
1.96.0-1 |
0 |
0.00
|
A collection of PCA methods |
BioArchLinuxBot
|
2024-05-01 18:22 (UTC) |
r-pcalg
|
2.7.11-1 |
0 |
0.00
|
Methods for Graphical Models and Causal Inference |
BioArchLinuxBot
|
2024-02-12 18:10 (UTC) |
r-pcal1
|
1.5.7-3 |
0 |
0.00
|
L1-Norm PCA Methods |
pekkarr
|
2024-04-24 19:32 (UTC) |
r-pcaexplorer
|
2.30.0-1 |
0 |
0.00
|
Interactive Visualization of RNA-seq Data Using a Principal Components Approach |
BioArchLinuxBot
|
2024-05-03 14:35 (UTC) |
r-pbmcapply
|
1.5.1-5 |
0 |
0.00
|
Tracking the Progress of Mc*pply with Progress Bar |
BioArchLinuxBot
|
2024-04-24 21:16 (UTC) |
r-pbkrtest
|
0.5.2-3 |
1 |
0.00
|
Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models |
BioArchLinuxBot
|
2023-02-09 18:29 (UTC) |
r-pbivnorm
|
0.6.0-12 |
0 |
0.00
|
Vectorized Bivariate Normal CDF |
BioArchLinuxBot
|
2024-03-08 18:04 (UTC) |
r-pbdzmq
|
0.3.10-1 |
0 |
0.00
|
Programming with Big Data – Interface to 'ZeroMQ' |
portaloffreedom
|
2023-12-18 16:07 (UTC) |
r-pbdmpi
|
0.5.1-2 |
0 |
0.00
|
R Interface to MPI for HPC Clusters (Programming with Big Data Project) |
pekkarr
|
2024-04-25 01:21 (UTC) |
r-pbapply
|
1.7.2-3 |
0 |
0.00
|
Adding Progress Bar to '*apply' Functions |
BioArchLinuxBot
|
2024-04-24 18:58 (UTC) |
r-paxtoolsr
|
1.36.0-1 |
0 |
0.00
|
Access Pathways from Multiple Databases Through BioPAX and Pathway Commons |
BioArchLinuxBot
|
2023-10-26 00:00 (UTC) |
r-paws.storage
|
0.6.0-1 |
0 |
0.00
|
'Amazon Web Services' Storage Services |
pekkarr
|
2024-05-10 18:15 (UTC) |
r-paws.common
|
0.7.2-1 |
0 |
0.00
|
Paws Low-Level Amazon Web Services API |
pekkarr
|
2024-04-09 18:04 (UTC) |
r-pathwaypca
|
1.20.0-1 |
0 |
0.00
|
Integrative Pathway Analysis with Modern PCA Methodology and Gene Selection |
BioArchLinuxBot
|
2024-05-02 04:39 (UTC) |
r-pathview
|
1.44.0-1 |
0 |
0.00
|
a tool set for pathway based data integration and visualization |
BioArchLinuxBot
|
2024-05-02 21:00 (UTC) |
r-pathvar
|
1.30.0-2 |
0 |
0.00
|
Methods to Find Pathways with Significantly Different Variability |
BioArchLinuxBot
|
2024-02-11 12:05 (UTC) |
r-pathrender
|
1.72.0-1 |
0 |
0.00
|
Render molecular pathways |
BioArchLinuxBot
|
2024-05-02 01:29 (UTC) |
r-pathostat
|
1.30.0-1 |
0 |
0.00
|
PathoStat Statistical Microbiome Analysis Package |
BioArchLinuxBot
|
2024-05-02 22:10 (UTC) |
r-pathnet
|
1.44.0-1 |
0 |
0.00
|
An R package for pathway analysis using topological information |
BioArchLinuxBot
|
2024-05-02 03:59 (UTC) |
r-pathifier
|
1.42.0-1 |
0 |
0.00
|
Quantify deregulation of pathways in cancer |
BioArchLinuxBot
|
2024-05-01 18:55 (UTC) |
r-path2ppi
|
1.34.0-1 |
0 |
0.00
|
Prediction of pathway-related protein-protein interaction networks |
BioArchLinuxBot
|
2024-05-01 21:27 (UTC) |
r-patchwork
|
1.2.0-1 |
0 |
0.00
|
The Composer of Plots |
BioArchLinuxBot
|
2024-01-08 18:03 (UTC) |
r-pastecs
|
1.4.2-1 |
0 |
0.00
|
Package for Analysis of Space-Time Ecological Series |
BioArchLinuxBot
|
2024-02-02 00:01 (UTC) |
r-past
|
1.20.0-1 |
0 |
0.00
|
Pathway Association Study Tool (PAST) |
BioArchLinuxBot
|
2024-05-03 01:08 (UTC) |
r-pasilla
|
1.32.0-1 |
0 |
0.00
|
Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. |
BioArchLinuxBot
|
2024-05-03 13:45 (UTC) |
r-partykit
|
1.2.20-1 |
0 |
0.00
|
A Toolkit for Recursive Partytioning |
BioArchLinuxBot
|
2023-04-14 12:03 (UTC) |