91490 packages found. Page 1 of 1830.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-basecallqc 1.28.0-1 0 0.00 Working with Illumina Basecalling and Demultiplexing input and output files BioArchLinuxBot 2024-05-03 01:30 (UTC)
r-ioniser 2.28.0-1 0 0.00 Quality Assessment Tools for Oxford Nanopore MinION data BioArchLinuxBot 2024-05-03 01:29 (UTC)
r-chipsim 1.58.0-1 0 0.00 Simulation of ChIP-seq experiments BioArchLinuxBot 2024-05-03 01:28 (UTC)
r-chipseqr 1.58.0-1 0 0.00 Identifying Protein Binding Sites in High-Throughput Sequencing Data BioArchLinuxBot 2024-05-03 01:27 (UTC)
r-segmentseq 2.38.0-1 0 0.00 Methods for identifying small RNA loci from high-throughput sequencing data BioArchLinuxBot 2024-05-03 01:26 (UTC)
r-fastqcleaner 1.22.0-1 0 0.00 A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files BioArchLinuxBot 2024-05-03 01:25 (UTC)
r-amplican 1.26.0-1 0 0.00 Automated analysis of CRISPR experiments BioArchLinuxBot 2024-05-03 01:24 (UTC)
r-otubase 1.54.0-1 0 0.00 Provides structure and functions for the analysis of OTU data BioArchLinuxBot 2024-05-03 01:23 (UTC)
r-chipseq 1.54.0-1 0 0.00 chipseq: A package for analyzing chipseq data BioArchLinuxBot 2024-05-03 01:22 (UTC)
borgtui-git r143.ce7487e-1 2 0.01 Like borgmatic, but with a TUI to help automate borg backups :^) dpbriggs 2024-05-03 01:22 (UTC)
r-nucler 2.36.0-1 0 0.00 Nucleosome positioning package for R BioArchLinuxBot 2024-05-03 01:21 (UTC)
r-girafe 1.56.0-1 0 0.00 Genome Intervals and Read Alignments for Functional Exploration BioArchLinuxBot 2024-05-03 01:20 (UTC)
kernel-hardening-checker-git 0.6.6.r61.g78c65e1-1 0 0.00 A tool for checking the security hardening options of the Linux kernel RiverOnVenus 2024-05-03 01:20 (UTC)
r-rsvsim 1.44.0-1 0 0.00 RSVSim: an R/Bioconductor package for the simulation of structural variations BioArchLinuxBot 2024-05-03 01:20 (UTC)
r-easylift 1.2.0-1 0 0.00 An R package to perform genomic liftover pekkarr 2024-05-03 01:19 (UTC)
r-rifi 1.8.0-1 0 0.00 'rifi' analyses data from rifampicin time series created by microarray or RNAseq pekkarr 2024-05-03 01:18 (UTC)
r-rificomparative 1.4.0-1 0 0.00 'rifiComparative' compares the output of rifi from two different conditions pekkarr 2024-05-03 01:17 (UTC)
r-genextender 1.30.0-1 0 0.00 Optimized Functional Annotation Of ChIP-seq Data BioArchLinuxBot 2024-05-03 01:16 (UTC)
r-sevenc 1.24.0-1 0 0.00 Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs BioArchLinuxBot 2024-05-03 01:14 (UTC)
r-intad 1.24.0-1 0 0.00 Search for correlation between epigenetic signals and gene expression in TADs BioArchLinuxBot 2024-05-03 01:14 (UTC)
r-epidecoder 1.12.0-1 0 0.00 epidecodeR: a functional exploration tool for epigenetic and epitranscriptomic regulation BioArchLinuxBot 2024-05-03 01:13 (UTC)
r-rgmql 1.24.0-1 0 0.00 GenoMetric Query Language for R/Bioconductor BioArchLinuxBot 2024-05-03 01:12 (UTC)
ferdium-git 6.7.4.nightly.2.r6798.9e3f925fc-1 1 0.37 A messaging browser that allows you to combine your favorite messaging services into one application (git build from latest commit). cedricroijakkers 2024-05-03 01:10 (UTC)
r-dmchmm 1.26.0-1 0 0.00 Differentially Methylated CpG using Hidden Markov Model BioArchLinuxBot 2024-05-03 01:10 (UTC)
r-coverageview 1.42.0-1 0 0.00 Coverage visualization package for R BioArchLinuxBot 2024-05-03 01:09 (UTC)
r-past 1.20.0-1 0 0.00 Pathway Association Study Tool (PAST) BioArchLinuxBot 2024-05-03 01:08 (UTC)
r-dmcfb 1.18.0-1 0 0.00 Differentially Methylated Cytosines via a Bayesian Functional Approach BioArchLinuxBot 2024-05-03 01:07 (UTC)
r-rmspc 1.10.0-1 0 0.00 Multiple Sample Peak Calling BioArchLinuxBot 2024-05-03 01:06 (UTC)
r-seqsetvis 1.24.0-1 0 0.00 Set Based Visualizations for Next-Gen Sequencing Data BioArchLinuxBot 2024-05-03 01:06 (UTC)
r-r3cseq 1.50.0-1 0 0.00 Analysis of Chromosome Conformation Capture and Next-generation Sequencing (3C-seq) BioArchLinuxBot 2024-05-03 01:05 (UTC)
r-recount3 1.14.0-1 0 0.00 Explore and download data from the recount3 project BioArchLinuxBot 2024-05-03 01:04 (UTC)
r-normr 1.30.0-1 0 0.00 Normalization and difference calling in ChIP-seq data BioArchLinuxBot 2024-05-03 01:03 (UTC)
r-consensusseeker 1.32.0-1 0 0.00 Detection of consensus regions inside a group of experiences using genomic positions and genomic ranges BioArchLinuxBot 2024-05-03 01:02 (UTC)
r-pram 1.20.0-1 0 0.00 Pooling RNA-seq datasets for assembling transcript models BioArchLinuxBot 2024-05-03 01:01 (UTC)
r-scanvis 1.18.0-1 0 0.00 SCANVIS - a tool for SCoring, ANnotating and VISualizing splice junctions BioArchLinuxBot 2024-05-03 01:00 (UTC)
yandex-messenger 2.155.0-3 1 0.43 Yandex Messenger is designed for communication: send text messages, make audio and video calls in private and group chats, subscribe to and create channels. Communicate with colleagues in a private space. bulatovv 2024-05-03 01:00 (UTC)
r-excluster 1.22.0-1 0 0.00 ExCluster robustly detects differentially expressed exons between two conditions of RNA-seq data, requiring at least two independent biological replicates per condition BioArchLinuxBot 2024-05-03 00:59 (UTC)
r-hitc 1.48.0-1 0 0.00 High Throughput Chromosome Conformation Capture analysis BioArchLinuxBot 2024-05-03 00:59 (UTC)
r-motifdb 1.46.0-1 0 0.00 An Annotated Collection of Protein-DNA Binding Sequence Motifs BioArchLinuxBot 2024-05-03 00:58 (UTC)
r-methylkit 1.30.0-1 0 0.00 DNA methylation analysis from high-throughput bisulfite sequencing results BioArchLinuxBot 2024-05-03 00:57 (UTC)
r-grohmm 1.38.0-1 0 0.00 GRO-seq Analysis Pipeline BioArchLinuxBot 2024-05-03 00:56 (UTC)
r-roar 1.40.0-1 0 0.00 Identify differential APA usage from RNA-seq alignments BioArchLinuxBot 2024-05-03 00:55 (UTC)
r-wiggleplotr 1.28.0-1 0 0.00 Make read coverage plots from BigWig files BioArchLinuxBot 2024-05-03 00:54 (UTC)
r-metagene2 1.20.0-1 0 0.00 A package to produce metagene plots BioArchLinuxBot 2024-05-03 00:53 (UTC)
r-plyranges 1.24.0-1 0 0.00 A fluent interface for manipulating GenomicRanges BioArchLinuxBot 2024-05-03 00:53 (UTC)
r-syntenet 1.6.0-1 0 0.00 Inference And Analysis Of Synteny Networks pekkarr 2024-05-03 00:52 (UTC)
r-bsgenome 1.72.0-1 0 0.00 Software infrastructure for efficient representation of full genomes and their SNPs BioArchLinuxBot 2024-05-03 00:50 (UTC)
r-genomicfeatures 1.56.0-1 0 0.00 Conveniently import and query gene models BioArchLinuxBot 2024-05-03 00:49 (UTC)
r-regenrich 1.14.0-1 0 0.00 Gene regulator enrichment analysis BioArchLinuxBot 2024-05-03 00:47 (UTC)
r-enrichplot 1.24.0-1 0 0.00 Visualization of Functional Enrichment Result BioArchLinuxBot 2024-05-03 00:46 (UTC)

91490 packages found. Page 1 of 1830.

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