r-seriation
|
1.5.5-1 |
0 |
0.00
|
Infrastructure for Ordering Objects Using Seriation |
BioArchLinuxBot
|
2024-04-18 00:02 (UTC) |
r-seqvartools
|
1.42.0-1 |
0 |
0.00
|
Tools for variant data |
BioArchLinuxBot
|
2024-05-02 01:53 (UTC) |
r-seqtools
|
1.38.0-1 |
0 |
0.00
|
Analysis of nucleotide, sequence and quality content on fastq files |
BioArchLinuxBot
|
2024-05-02 05:10 (UTC) |
r-seqsqc
|
1.26.0-1 |
0 |
0.00
|
A bioconductor package for sample quality check with next generation sequencing data |
BioArchLinuxBot
|
2024-05-02 20:42 (UTC) |
r-seqsetvis
|
1.24.0-1 |
0 |
0.00
|
Set Based Visualizations for Next-Gen Sequencing Data |
BioArchLinuxBot
|
2024-05-03 01:06 (UTC) |
r-seqpattern
|
1.36.0-1 |
0 |
0.00
|
Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences |
BioArchLinuxBot
|
2024-05-02 00:07 (UTC) |
r-seqminer
|
9.4-1 |
0 |
0.00
|
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R |
BioArchLinuxBot
|
2024-02-03 18:02 (UTC) |
r-seqmagick
|
0.1.7-2 |
0 |
0.00
|
Sequence Manipulation Utilities |
BioArchLinuxBot
|
2024-04-26 14:22 (UTC) |
r-seqlogo
|
1.70.0-1 |
0 |
0.00
|
Sequence logos for DNA sequence alignments |
BioArchLinuxBot
|
2024-05-02 03:17 (UTC) |
r-seqinr
|
4.2.36-1 |
0 |
0.00
|
Biological Sequences Retrieval and Analysis |
BioArchLinuxBot
|
2023-12-08 18:03 (UTC) |
r-seqgsea
|
1.44.0-1 |
0 |
0.00
|
Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing |
BioArchLinuxBot
|
2024-05-02 23:07 (UTC) |
r-seqgate
|
1.14.0-1 |
0 |
0.00
|
Filtering of Lowly Expressed Features |
BioArchLinuxBot
|
2024-05-02 19:32 (UTC) |
r-seqcombo
|
1.26.0-1 |
0 |
0.00
|
Visualization Tool for Sequence Recombination and Reassortment |
BioArchLinuxBot
|
2024-05-01 21:30 (UTC) |
r-seqcna.annot
|
1.38.0-2 |
0 |
0.00
|
Annotation for the copy number analysis of deep sequencing cancer data with seqCNA |
BioArchLinuxBot
|
2024-03-15 14:10 (UTC) |
r-seqcna
|
1.48.0-1 |
0 |
0.00
|
Copy number analysis of high-throughput sequencing cancer data |
BioArchLinuxBot
|
2023-10-25 22:08 (UTC) |
r-seqcat
|
1.26.0-1 |
0 |
0.00
|
High Throughput Sequencing Cell Authentication Toolkit |
BioArchLinuxBot
|
2024-05-03 04:49 (UTC) |
r-seqbias
|
1.50.0-1 |
0 |
0.00
|
Estimation of per-position bias in high-throughput sequencing data |
BioArchLinuxBot
|
2023-10-26 02:57 (UTC) |
r-seqarray
|
1.44.0-1 |
0 |
0.00
|
Data management of large-scale whole-genome sequence variant calls |
BioArchLinuxBot
|
2024-05-02 00:09 (UTC) |
r-seqarchrplus
|
1.4.0-1 |
0 |
0.00
|
Downstream analyses of promoter sequence architectures and HTML report generation |
pekkarr
|
2024-05-03 04:24 (UTC) |
r-seqarchr
|
1.8.0-1 |
0 |
0.00
|
Identify Different Architectures of Sequence Elements |
pekkarr
|
2024-05-02 18:36 (UTC) |
r-seq2pathway.data
|
1.36.0-1 |
0 |
0.00
|
data set for R package seq2pathway |
BioArchLinuxBot
|
2024-05-04 00:14 (UTC) |
r-seq2pathway
|
1.36.0-1 |
0 |
0.00
|
a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data |
BioArchLinuxBot
|
2024-05-02 23:16 (UTC) |
r-seq.hotspot
|
1.4.0-1 |
0 |
0.00
|
Targeted sequencing panel design based on mutation hotspots |
pekkarr
|
2024-05-02 04:48 (UTC) |
r-sepira
|
1.22.0-1 |
0 |
0.00
|
Systems EPigenomics Inference of Regulatory Activity |
BioArchLinuxBot
|
2024-04-13 18:02 (UTC) |
r-sendmailr
|
1.4.0-5 |
0 |
0.00
|
Send Email Using R |
BioArchLinuxBot
|
2024-04-10 18:11 (UTC) |
r-semtools
|
0.5.6-6 |
0 |
0.00
|
Useful Tools for Structural Equation Modeling |
BioArchLinuxBot
|
2022-06-06 14:35 (UTC) |
r-semplot
|
1.1.6-1 |
0 |
0.00
|
Path Diagrams and Visual Analysis of Various SEM Packages' Output |
BioArchLinuxBot
|
2022-08-10 14:22 (UTC) |
r-semisup
|
1.28.0-1 |
0 |
0.00
|
Semi-Supervised Mixture Model |
BioArchLinuxBot
|
2024-05-02 04:35 (UTC) |
r-semdist
|
1.38.0-1 |
0 |
0.00
|
Information Accretion-based Function Predictor Evaluation |
BioArchLinuxBot
|
2024-05-03 12:12 (UTC) |
r-sem
|
3.1.15-4 |
0 |
0.00
|
Structural Equation Models |
BioArchLinuxBot
|
2022-06-06 14:33 (UTC) |
r-selex
|
1.36.0-1 |
0 |
0.00
|
Functions for analyzing SELEX-seq data |
BioArchLinuxBot
|
2024-05-02 00:28 (UTC) |
r-selectr
|
0.4.2-2 |
0 |
0.00
|
Translate CSS Selectors to XPath Expressions |
alhirzel
|
2021-05-26 01:23 (UTC) |
r-selectksigs
|
1.16.0-1 |
0 |
0.00
|
Selecting the number of mutational signatures using a perplexity-based measure and cross-validation |
BioArchLinuxBot
|
2024-05-03 05:20 (UTC) |
r-segmentseq
|
2.38.0-1 |
0 |
0.00
|
Methods for identifying small RNA loci from high-throughput sequencing data |
BioArchLinuxBot
|
2024-05-03 01:26 (UTC) |
r-segmenter
|
1.10.0-1 |
0 |
0.00
|
Perform Chromatin Segmentation Analysis in R by Calling ChromHMM |
BioArchLinuxBot
|
2024-05-03 04:23 (UTC) |
r-segmented
|
2.1.0-1 |
0 |
0.00
|
Regression Models with Break-Points / Change-Points Estimation (with Possibly Random Effects) |
BioArchLinuxBot
|
2024-05-14 12:01 (UTC) |
r-sechm
|
1.12.0-1 |
0 |
0.00
|
sechm: Complex Heatmaps from a SummarizedExperiment |
BioArchLinuxBot
|
2024-05-02 20:26 (UTC) |
r-sde
|
2.0.18-1 |
0 |
0.00
|
Simulation and Inference for Stochastic Differential Equations |
AlexBocken
|
2024-01-11 20:26 (UTC) |
r-sdams
|
1.24.0-1 |
0 |
0.00
|
Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data |
BioArchLinuxBot
|
2024-05-02 19:09 (UTC) |
r-scvir
|
1.4.0-1 |
0 |
0.00
|
experimental inferface from R to scvi-tools |
pekkarr
|
2024-05-03 01:55 (UTC) |
r-scuttle
|
1.14.0-1 |
0 |
0.00
|
Single-Cell RNA-Seq Analysis Utilities |
BioArchLinuxBot
|
2024-05-02 21:18 (UTC) |
r-sctreeviz
|
1.10.0-1 |
0 |
0.00
|
R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations |
BioArchLinuxBot
|
2024-05-03 14:45 (UTC) |
r-sctransform
|
0.4.1-1 |
0 |
0.00
|
Variance Stabilizing Transformations for Single Cell UMI Data |
BioArchLinuxBot
|
2023-10-19 06:01 (UTC) |
r-scthi
|
1.16.0-1 |
0 |
0.00
|
Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-01 19:49 (UTC) |
r-sctgif
|
1.18.0-1 |
0 |
0.00
|
Cell type annotation for unannotated single-cell RNA-Seq data |
BioArchLinuxBot
|
2024-05-03 12:53 (UTC) |
r-sctensor
|
2.14.0-1 |
0 |
0.00
|
Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition |
BioArchLinuxBot
|
2024-05-03 14:38 (UTC) |
r-scshapes
|
1.10.0-1 |
0 |
0.00
|
A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data |
BioArchLinuxBot
|
2024-05-01 19:50 (UTC) |
r-scs
|
3.2.4-4 |
0 |
0.00
|
Splitting Conic Solver |
BioArchLinuxBot
|
2024-04-24 21:03 (UTC) |
r-scrypt
|
0.1.6-3 |
0 |
0.00
|
Key Derivation Functions for R Based on Scrypt |
pekkarr
|
2024-04-25 02:37 (UTC) |
r-scry
|
1.16.0-1 |
0 |
0.00
|
Small-Count Analysis Methods for High-Dimensional Data |
BioArchLinuxBot
|
2024-05-02 21:40 (UTC) |